[R] Dependency errors for package pracma

2023-11-08 Thread Hans W
I tried to update my package {pracma} on CRAN from 2.4.2 (2022-09-21)
to version 2.4.4 (2023-11-08). This package reverse depends / imports
/ suggests on 350 packages on CRAN and 25 packages on Bioconductor.

The only changes are small corrections on some help files, a new
function for stereographic projection, and `gcd` and `Lcm` require
integer inputs now (these functions are not used in the packages
below).

I received a dependency report saying that
*** Changes to worse in reverse dependencies ***
celltrackR, geostatsp, gmvjoint, hypr, randnet

Example: geostatsp suggests pracma, but uses only the function 'trapz'
that has not changed for years and years.
I cannot check this package, as probably other packages (from
Bioconductor ?) are needed to install it.

Example: gmvjoint imports pracma and uses 'grad', 'hessian', and
'nearest_spd'; these functions have not changed for years.
On my system, gmvjoint gets checked without ERRORs !

What should I do? Frankly, I do not have the time to check these
packages or to test almost 400 packages before uploading to CRAN.
Okay, I can leave it as is and wait until it gets thrown off CRAN
(because of some new syntax checks, e.g.). I will not mind much. Are
there better alternatives?

Thanks, Hans Werner

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Re: [R] make a lattice dotplot with symbol size proportional to a variable in the plotted dataframe

2023-11-08 Thread Bert Gunter
... and see also Section 3.5, Scope of Variables in the "R Language
Definition" manual that ships with R.

Cheers,
Bert

On Wed, Nov 8, 2023 at 8:06 AM Deepayan Sarkar 
wrote:

> On Wed, 8 Nov 2023 at 10:56, Christopher W. Ryan via R-help
>  wrote:
> >
> > Very helpful, Deepayan, and educational. Thank you.
> >
> > What does NSE stand for?
>
> Non-standard evaluation, used widely in formula-interface functions as
> well as the tidyverse. with() in my example is a less nuanced version
> of this. See
>
> http://adv-r.had.co.nz/Computing-on-the-language.html
>
> https://developer.r-project.org/nonstandard-eval.pdf
>
> Best,
> -Deepayan
>
>
> > Thanks,
> > Chris
> >
> > Deepayan Sarkar wrote:
> > >
> > > --Chris Ryan
> >
> > __
> > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
>
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>

[[alternative HTML version deleted]]

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Re: [R] make a lattice dotplot with symbol size proportional to a variable in the plotted dataframe

2023-11-08 Thread Deepayan Sarkar
On Wed, 8 Nov 2023 at 10:56, Christopher W. Ryan via R-help
 wrote:
>
> Very helpful, Deepayan, and educational. Thank you.
>
> What does NSE stand for?

Non-standard evaluation, used widely in formula-interface functions as
well as the tidyverse. with() in my example is a less nuanced version
of this. See

http://adv-r.had.co.nz/Computing-on-the-language.html

https://developer.r-project.org/nonstandard-eval.pdf

Best,
-Deepayan


> Thanks,
> Chris
>
> Deepayan Sarkar wrote:
> >
> > --Chris Ryan
>
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

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Re: [R] make a lattice dotplot with symbol size proportional to a variable in the plotted dataframe

2023-11-08 Thread Ben Bolker

  Non-standard evaluation

On 2023-11-08 10:56 a.m., Christopher W. Ryan via R-help wrote:

Very helpful, Deepayan, and educational. Thank you.

What does NSE stand for?

Thanks,
Chris

Deepayan Sarkar wrote:


--Chris Ryan


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Re: [R] make a lattice dotplot with symbol size proportional to a variable in the plotted dataframe

2023-11-08 Thread Christopher W. Ryan via R-help
Very helpful, Deepayan, and educational. Thank you.

What does NSE stand for?

Thanks,
Chris

Deepayan Sarkar wrote:
> 
> --Chris Ryan

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and provide commented, minimal, self-contained, reproducible code.