Re: [R] R commander (Rcmdr) won't start [SOLVED]
Dear John, thank you for your prompt reply. An inexperienced user like me tends to see the .Rdata folder like the document folder for other programs, and, as one doesn't have to delete the document folder when updating Libreoffice, tends to think the same for R. But let me take the opportunity to express a huge thank you for your work on Rcmdr. For people like me, who do statistical analyses just a few times a year, it is a very precious resource, which can also serve as an introduction to command-line R. As an applied linguist with a background in semiotics, I would have plenty of reasons to explain why a graphic interface is such a good thing. As a taxpayer, I appreciate the fact that it makes us saves money as it allows students and researchers in the humanities, like me, to do some basic statistics without buying SPSS licences. I don't want to open a debate here on the pros and cons of graphical interfaces. Let me just say you're doing an excellent service to the community, both with your package and your replies to this forum, which shows you're a really kind person and deserve all our appreciation. Best wishes Gabriele Pallotti (Italy) Il giorno ven 6 dic 2019 alle ore 22:58 Fox, John ha scritto: > Dear Gabriele, > > I'm glad that you were able to solve your problem. I spent a bit of time > today updating my R from 3.6.0 to 3.6.1 and updating all R packages on > Ubuntu, and, for what is now an obvious reason, I was unable to duplicate > the problem. > > Saving the .Rhistory file is benign but saving the R workspace at the end > of a session in .RData can be problematic, and not just for the Rcmdr. > You'll notice that while R makes saving the workspace the default > (presumably to avoid inadvertent data loss, and in my opinion not a good > default choice), the Rcmdr doesn't offer to save the R workspace when you > select "File > Exit > From Commander and R" from the Rcmdr menus. > > Best, > John > > - > John Fox, Professor Emeritus > McMaster University > Hamilton, Ontario, Canada > Web: http::/socserv.mcmaster.ca/jfox > > > On Dec 6, 2019, at 1:38 PM, gabriele pallotti > wrote: > > > > I managed to get Rcmdr working simply by deleting the .Rdata and > .Rhistory > > file from the work directory. It is rather weird, as I thought they only > > contained data and settings, but probably some of these belonged to the > > older version of R/Rcmdr and were not compatible with the new version. > > I'll keep the old data files in a separate folder and try to open them > as a > > workspace after launching Rcmdr, but I won't do it now as I need Rcmdr to > > work in the next days and I don't want to take any risks... > > > > [[alternative HTML version deleted]] > > > > __ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R commander (Rcmdr) won't start [SOLVED]
I managed to get Rcmdr working simply by deleting the .Rdata and .Rhistory file from the work directory. It is rather weird, as I thought they only contained data and settings, but probably some of these belonged to the older version of R/Rcmdr and were not compatible with the new version. I'll keep the old data files in a separate folder and try to open them as a workspace after launching Rcmdr, but I won't do it now as I need Rcmdr to work in the next days and I don't want to take any risks... [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R commander (Rcmdr) won't start
Hallo I've been using R and R commander (Rcmdr) for some years, never had problems. I'm on Xubuntu 16.04. Yesterday I updated R from 3.4.4 to 3.6.1 and all sorts of problems occurred. Firstly I completely removed R from my system, including old directories (with some hiccups, I must admit). Then I installed R and R-dev without issues. Had some issues installing Rcmdr, but in the end I met all the requirements and installed all the requested packages, including rgl and a few others that were requested upon first launching Rcmdr. After that, no more error messages. However, whenever I launch R commander I get these lines, which don't mention any problem, but the GUI won't launch. > library(Rcmdr) Carico il pacchetto richiesto: splines Carico il pacchetto richiesto: RcmdrMisc Carico il pacchetto richiesto: car Carico il pacchetto richiesto: carData Carico il pacchetto richiesto: sandwich Carico il pacchetto richiesto: effects Registered S3 methods overwritten by 'lme4': method from cooks.distance.influence.merMod car influence.merModcar dfbeta.influence.merMod car dfbetas.influence.merModcar lattice theme set by effectsTheme() See ?effectsTheme for details. After seeing, if I type library(Rcmdr) again, nothing happens. I installed Hmisc, leaps and aplpack, as these were indicated as possible solutions, but to no avail. This is the output of sys.info and sessionInfo > Sys.info() sysname "Linux" release "4.4.0-170-generic" version "#199-Ubuntu SMP Thu Nov 14 01:45:04 UTC 2019" nodename "me-HP430" machine "x86_64" login "me" user "me" effective_user "me" > sessionInfo() R version 3.6.1 (2019-07-05) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.6 LTS Matrix products: default BLAS: /usr/lib/libblas/libblas.so.3.6.0 LAPACK: /usr/lib/lapack/liblapack.so.3.6.0 Random number generation: RNG: Mersenne-Twister Normal: Inversion Sample: Rounding locale: [1] LC_CTYPE=it_IT.UTF-8 LC_NUMERIC=C [3] LC_TIME=it_IT.UTF-8LC_COLLATE=it_IT.UTF-8 [5] LC_MONETARY=it_IT.UTF-8LC_MESSAGES=it_IT.UTF-8 [7] LC_PAPER=it_IT.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=it_IT.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] splines stats graphics grDevices utils datasets methods [8] base other attached packages: [1] effects_4.1-4 RcmdrMisc_2.5-1 sandwich_2.5-1 car_3.0-5 [5] carData_3.0-3 loaded via a namespace (and not attached): [1] Rcpp_1.0.3 lattice_0.20-38 tcltk2_1.2-11 [4] class_7.3-15zoo_1.8-6 relimp_1.0-5 [7] zeallot_0.1.0 digest_0.6.23 R6_2.4.1 [10] cellranger_1.1.0backports_1.1.5 acepack_1.4.1 [13] survey_3.36 e1071_1.7-3 ggplot2_3.2.1 [16] pillar_1.4.2rlang_0.4.2 lazyeval_0.2.2 [19] curl_4.3readxl_1.3.1minqa_1.2.4 [22] rstudioapi_0.10 data.table_1.12.6 nloptr_1.2.1 [25] rpart_4.1-15Matrix_1.2-18 checkmate_1.9.4 [28] lme4_1.1-21 stringr_1.4.0 foreign_0.8-72 [31] htmlwidgets_1.5.1 munsell_0.5.0 compiler_3.6.1 [34] xfun_0.11 pkgconfig_2.0.3 base64enc_0.1-3 [37] mitools_2.4 htmltools_0.4.0 tcltk_3.6.1 [40] nnet_7.3-12 tibble_2.1.3gridExtra_2.3 [43] htmlTable_1.13.3Hmisc_4.3-0 rio_0.5.16 [46] Rcmdr_2.6-1 crayon_1.3.4MASS_7.3-51.4 [49] grid_3.6.1 DBI_1.0.0 nlme_3.1-142 [52] gtable_0.3.0lifecycle_0.1.0 magrittr_1.5 [55] scales_1.1.0zip_2.0.4 stringi_1.4.3 [58] latticeExtra_0.6-28 vctrs_0.2.0 boot_1.3-23 [61] openxlsx_4.1.3 nortest_1.0-4 Formula_1.2-3 [64] RColorBrewer_1.1-2 tools_3.6.1 forcats_0.4.0 [67] hms_0.5.2 abind_1.4-5 survival_3.1-8 [70] colorspace_1.4-1cluster_2.1.0 knitr_1.26 [73] haven_2.2.0 This is the list of installed packages: PackageVersion aplpack 1.3.3 Hmisc 4.3-0 leaps3.0 Rcmdr 2.6-1 abind 1.4-5 acepack 1.4.1 aplpack 1.3.3 arm 1.10-1 assertthat 0.2.1 backports 1.1.5 base64enc 0.1-3 BH 1.69.0-1 callr 3.3.2 car 3.0-5
