Re: [R] Can R be embedded in html?
Try R package 'brew'? From its package description Description:brew implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module. There is also the rApache project and many other useful links mentioned on R Web Interfaces on the R FAQ page. Jagat -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of chawla Sent: Wednesday, November 28, 2012 9:04 AM To: r-help@r-project.org Subject: [R] Can R be embedded in html? Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Can R be embedded in html?
I grab the opportunity to suggest giving a try `pander` package, which holds a forked version of `brew` called `Pandoc.brew`. If you are familiar with `brew`, you could easily create nicely formatted HTML output automatically beside other formats, example: http://rapporter.github.com/pander/#examples But if you want to run those files directly, then RApache is the way to go with `RHandler brew::brew`, although that would end up in a spaghetti code. It's better to keep R and HTML separately in the long run. Best, Gergely On Thu, Nov 29, 2012 at 4:41 PM, jagat.k.sh...@wellsfargo.com wrote: Try R package 'brew'? From its package description Description:brew implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module. There is also the rApache project and many other useful links mentioned on R Web Interfaces on the R FAQ page. Jagat -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of chawla Sent: Wednesday, November 28, 2012 9:04 AM To: r-help@r-project.org Subject: [R] Can R be embedded in html? Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Can R be embedded in html?
I did not read every reply; perhaps someone has already mentioned Shiny. There are a few live examples of embedding R in HTML here: http://www.rstudio.com/shiny/ Regards, Yihui -- Yihui Xie xieyi...@gmail.com Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State University 2215 Snedecor Hall, Ames, IA On Thu, Nov 29, 2012 at 10:34 AM, Gergely Daróczi gerg...@snowl.net wrote: I grab the opportunity to suggest giving a try `pander` package, which holds a forked version of `brew` called `Pandoc.brew`. If you are familiar with `brew`, you could easily create nicely formatted HTML output automatically beside other formats, example: http://rapporter.github.com/pander/#examples But if you want to run those files directly, then RApache is the way to go with `RHandler brew::brew`, although that would end up in a spaghetti code. It's better to keep R and HTML separately in the long run. Best, Gergely On Thu, Nov 29, 2012 at 4:41 PM, jagat.k.sh...@wellsfargo.com wrote: Try R package 'brew'? From its package description Description:brew implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module. There is also the rApache project and many other useful links mentioned on R Web Interfaces on the R FAQ page. Jagat -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of chawla Sent: Wednesday, November 28, 2012 9:04 AM To: r-help@r-project.org Subject: [R] Can R be embedded in html? Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Can R be embedded in html?
I haven't used it yet, so I can't comment about the stability or appropriateness of it, but R.NET looks somewhat promising for this: http://rdotnet.codeplex.com/ Shiny is another potential way to go. You could also take a look at David Firth's CGIwithR: http://www2.warwick.ac.uk/fac/sci/statistics/staff/academic-research/firth/software/cgiwithr/. --Mark J. Lamias From: Gergely Daróczi gerg...@snowl.net To: jagat.k.sh...@wellsfargo.com Cc: r-help@r-project.org; cha...@bio.ntnu.no Sent: Thursday, November 29, 2012 11:34 AM Subject: Re: [R] Can R be embedded in html? I grab the opportunity to suggest giving a try `pander` package, which holds a forked version of `brew` called `Pandoc.brew`. If you are familiar with `brew`, you could easily create nicely formatted HTML output automatically beside other formats, example: http://rapporter.github.com/pander/#examples But if you want to run those files directly, then RApache is the way to go with `RHandler brew::brew`, although that would end up in a spaghetti code. It's better to keep R and HTML separately in the long run. Best, Gergely On Thu, Nov 29, 2012 at 4:41 PM, jagat.k.sh...@wellsfargo.com wrote: Try R package 'brew'? From its package description Description: brew implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module. There is also the rApache project and many other useful links mentioned on R Web Interfaces on the R FAQ page. Jagat -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of chawla Sent: Wednesday, November 28, 2012 9:04 AM To: r-help@r-project.org Subject: [R] Can R be embedded in html? Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Can R be embedded in html?
Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Can R be embedded in html?
Google for the new Shiny package from RStudio. Michael On Nov 28, 2012, at 3:04 PM, chawla cha...@bio.ntnu.no wrote: Hi I have previously used PHP script in HTML to connect website with the database and do analysis. Is it also possible to execute R scripts within HTML files? Basically I want to create an application where user can input data such as gene list and their expression values, which can be processed by R and result be displayed or made available for download. If there is some guide on how to do this please give the link. Thanks Konika __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
