Re: [R] Extracting coordinates for cluster::clusplot()

2009-01-31 Thread Mark Difford

 Dear Friends,
 How can I extract the coordinates used in the plot?

They are not made available. You can get them as follows:

x - rbind(cbind(rnorm(10, 0, 0.5), rnorm(10, 0, 0.5)),  
cbind(rnorm(15, 5, 0.5), rnorm(15, 5, 0.5)))
pp - pam(x, 2)

## The coordinates are in obj$scores
princomp(pp$data, scores = TRUE, cor = ncol(pp$data) != 2)$scores
plot(princomp(pp$data, scores = TRUE, cor = ncol(pp$data) != 2)$scores)

I have not set the y-scaling to match to output from plot(pp, which = 1),
but you can set it for yourself to see that they are the same. Or you can
debug clusplot() for yourself.

Mark Difford.


Michael Kubovy wrote:
 
 Dear Friends,
 
 require(cluster)
 x - rbind(cbind(rnorm(10, 0, 0.5), rnorm(10, 0, 0.5)),  
 cbind(rnorm(15, 5, 0.5), rnorm(15, 5, 0.5)))
 plot(pp - pam(x, 2), which.plots = 1)
 
 How can I extract the coordinates used in the plot?
 
 _
 Professor Michael Kubovy
 University of Virginia
 Department of Psychology
 Postal Address:
   P.O.Box 400400, Charlottesville, VA 22904-4400
 Express Parcels Address:
   Gilmer Hall, Room 102, McCormick Road, Charlottesville, VA 22903
 Office:B011;  Phone: +1-434-982-4729
 Lab:B019; Phone: +1-434-982-4751
 WWW:http://www.people.virginia.edu/~mk9y/
 Skype name: polyurinsane
 
 
 
 
 
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[R] Extracting coordinates for cluster::clusplot()

2009-01-30 Thread Michael Kubovy
Dear Friends,

require(cluster)
x - rbind(cbind(rnorm(10, 0, 0.5), rnorm(10, 0, 0.5)),  
cbind(rnorm(15, 5, 0.5), rnorm(15, 5, 0.5)))
plot(pp - pam(x, 2), which.plots = 1)

How can I extract the coordinates used in the plot?

_
Professor Michael Kubovy
University of Virginia
Department of Psychology
Postal Address:
P.O.Box 400400, Charlottesville, VA 22904-4400
Express Parcels Address:
Gilmer Hall, Room 102, McCormick Road, Charlottesville, VA 22903
Office:B011;Phone: +1-434-982-4729
Lab:B019;   Phone: +1-434-982-4751
WWW:http://www.people.virginia.edu/~mk9y/
Skype name: polyurinsane





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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.