[R] FW: Library update from version

2013-09-30 Thread Cem Girit
Hello,

 

I recently installed version 3.0.1 of R on to a computer. I
have a working installation for a Statconn application using R version
2.15.0 on another computer. I have many libraries under this old
installation. Can I just copy them into the new library from the old, or do
I install each one of them under the new R? Also how can I get a list of
differences in two libraries so that I can use this list to update the new
one? 

 

Thank you.

 

Cem

 

 

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Re: [R] FW: Library update from version

2013-09-30 Thread Steve Lianoglou
Hi,

On Mon, Sep 30, 2013 at 11:12 AM, Cem Girit gi...@comcast.net wrote:
 Hello,



 I recently installed version 3.0.1 of R on to a computer. I
 have a working installation for a Statconn application using R version
 2.15.0 on another computer. I have many libraries under this old
 installation. Can I just copy them into the new library from the old, or do
 I install each one of them under the new R?

No, you shouldn't do that.

 Also how can I get a list of
 differences in two libraries so that I can use this list to update the new
 one?

A bit of googling could have provided several answers.

This post in particular has a few answers from some people who know
what they're doing w/ R, so probably a good place to start:

http://stackoverflow.com/questions/1401904/painless-way-to-install-a-new-version-of-r-on-windows

HTH,
-steve

-- 
Steve Lianoglou
Computational Biologist
Bioinformatics and Computational Biology
Genentech

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Re: [R] FW: Library update from version

2013-09-30 Thread Dennis Murphy
In this case the OP probably does need to reinstall contributed
packages since going from 2.15.x to 3.0.y entails a major version
change in R.

Dennis

On Mon, Sep 30, 2013 at 11:49 AM, Steve Lianoglou
lianoglou.st...@gene.com wrote:
 Hi,

 On Mon, Sep 30, 2013 at 11:12 AM, Cem Girit gi...@comcast.net wrote:
 Hello,



 I recently installed version 3.0.1 of R on to a computer. I
 have a working installation for a Statconn application using R version
 2.15.0 on another computer. I have many libraries under this old
 installation. Can I just copy them into the new library from the old, or do
 I install each one of them under the new R?

 No, you shouldn't do that.

 Also how can I get a list of
 differences in two libraries so that I can use this list to update the new
 one?

 A bit of googling could have provided several answers.

 This post in particular has a few answers from some people who know
 what they're doing w/ R, so probably a good place to start:

 http://stackoverflow.com/questions/1401904/painless-way-to-install-a-new-version-of-r-on-windows

 HTH,
 -steve

 --
 Steve Lianoglou
 Computational Biologist
 Bioinformatics and Computational Biology
 Genentech

 __
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.

__
R-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] FW: Library update from version

2013-09-30 Thread Ista Zahn
On Mon, Sep 30, 2013 at 2:49 PM, Steve Lianoglou
lianoglou.st...@gene.com wrote:
 Hi,

 On Mon, Sep 30, 2013 at 11:12 AM, Cem Girit gi...@comcast.net wrote:
 Hello,



 I recently installed version 3.0.1 of R on to a computer. I
 have a working installation for a Statconn application using R version
 2.15.0 on another computer. I have many libraries under this old
 installation. Can I just copy them into the new library from the old, or do
 I install each one of them under the new R?

 No, you shouldn't do that.

Really? Why not? Note that the Windows upgrade FAQ
(http://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f)
says to do exactly that.

Best,
Ista

 Also how can I get a list of
 differences in two libraries so that I can use this list to update the new
 one?

 A bit of googling could have provided several answers.

 This post in particular has a few answers from some people who know
 what they're doing w/ R, so probably a good place to start:

 http://stackoverflow.com/questions/1401904/painless-way-to-install-a-new-version-of-r-on-windows

 HTH,
 -steve

 --
 Steve Lianoglou
 Computational Biologist
 Bioinformatics and Computational Biology
 Genentech

 __
 R-help@r-project.org mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] FW: Library update from version

2013-09-30 Thread Steve Lianoglou
Hi,

On Mon, Sep 30, 2013 at 12:44 PM, Ista Zahn istaz...@gmail.com wrote:
 On Mon, Sep 30, 2013 at 2:49 PM, Steve Lianoglou
 lianoglou.st...@gene.com wrote:
 Hi,

 On Mon, Sep 30, 2013 at 11:12 AM, Cem Girit gi...@comcast.net wrote:
 Hello,



 I recently installed version 3.0.1 of R on to a computer. I
 have a working installation for a Statconn application using R version
 2.15.0 on another computer. I have many libraries under this old
 installation. Can I just copy them into the new library from the old, or do
 I install each one of them under the new R?

 No, you shouldn't do that.

 Really? Why not?

Because it has been my experience that people *just* do that (ie. the
*just* copy the libraries, as the OP asked).

But as you correctly point out:

 Note that the Windows upgrade FAQ
 (http://cran.r-project.org/bin/windows/base/rw-FAQ.html#What_0027s-the-best-way-to-upgrade_003f)
 says to do exactly that.

There is a way to copy the old package and then ensure that they are
updated to the versions that build correctly on the newest version of
R.


-steve

-- 
Steve Lianoglou
Computational Biologist
Bioinformatics and Computational Biology
Genentech

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.