Re: [R] Fwd: Sum of a couple of variables of which a few have NA values

2012-01-11 Thread Ivan Calandra

Dear Petra,

I think the easiest way, because the most flexible to me, would be to 
have an object containing the indexes of the variables you want to use.


indx - c(2,3,4,6,35)  # The first column is id right?
dat$sums - rowSums(dat[indx], na.rm=TRUE)

See what I mean?
There are probably other solutions, but this is what I would do.
HTH,
Ivan



Le 10/01/12 19:47, PetraOpic a écrit :

Dear Ivan,

Thank you very much for your help.

How do I use rowSums if I need to skip a variable from summing? (example:
sum var1, var2, var3, var5, var34 only).

Thanks in advance,
Petra Opic

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 Message original 
Sujet:  Fwd: [R] Sum of a couple of variables of which a few have NA values
Date :  Tue, 10 Jan 2012 17:44:44 +0100
De :Ivan Calandra ivan.calan...@u-bourgogne.fr
Répondre à :ivan.calan...@u-bourgogne.fr
Pour :  R list r-help@r-project.org



Hi Petra,

Try this:
dat$sums- rowSums(dat[3:5], na.rm=TRUE)

I think this should do what you're looking for
HTH,
Ivan

 Message original 
Sujet:  [R] Sum of a couple of variables of which a few have NA values
Date :  Tue, 10 Jan 2012 17:25:21 +0100
De :Petra Opicpetrao...@gmail.com
Pour :  r-help@r-project.org



Dear everyone,

I have looked all over the internet but I cannot find a way to solve my problem.

In my data I want to sum a couple of variables. Some of these
variables have NA values, and when I add them together, the result is
NA

dat- data.frame(
id = gl(5,1),
var1 = rnorm(5, 10),
var2 = rnorm(5, 7),
var3 = rnorm(5, 6),
var4 = rnorm(5, 3),
var5 = rnorm(5, 8)
)
dat[3,3]- NA
dat[4,5]- NA


  dat

 id  var1 var2 var3 var4 var5
1  1  9.371328 7.830814 5.032541 3.491053 7.626418
2  2 10.413516 7.333630 6.557178 1.465597 8.591770
3  3 10.967073   NA 6.674079 3.946451 7.251263
4  4  9.900380 7.727111 5.059698   NA 6.632962
5  5  9.191068 7.901271 6.652410 2.734856 8.484757

attach(dat)

dat$sum- var2 + var3 + var4 # I think I'm doing this wrong, but I
don't know what command to use


  dat

  id  var1 var2 var3 var4 var5  sum
1  1  9.371328 7.830814 5.032541 3.491053 7.626418 16.35441
2  2 10.413516 7.333630 6.557178 1.465597 8.591770 15.35640
3  3 10.967073   NA 6.674079 3.946451 7.251263   NA
4  4  9.900380 7.727111 5.059698   NA 6.632962   NA
5  5  9.191068 7.901271 6.652410 2.734856 8.484757 17.28854

I would like to omit the values of NA and just sum the rest.

I tried to use rowSums() but that sums an entire row and I only need a
few variables.

Does anyone know how to do this?

Thanks in advance,
Petra

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and provide commented, minimal, self-contained, reproducible code.




--
Ivan CALANDRA
Université de Bourgogne
UMR CNRS 5561 Biogéosciences
6 Boulevard Gabriel
21000 Dijon, FRANCE
ivan.calan...@u-bourgogne.fr

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and provide commented, minimal, self-contained, reproducible code.


[R] Fwd: Sum of a couple of variables of which a few have NA values

2012-01-10 Thread Ivan Calandra

Hi Petra,

Try this:
dat$sums - rowSums(dat[3:5], na.rm=TRUE)

I think this should do what you're looking for
HTH,
Ivan

 Message original 
Sujet:  [R] Sum of a couple of variables of which a few have NA values
Date :  Tue, 10 Jan 2012 17:25:21 +0100
De :Petra Opic petrao...@gmail.com
Pour :  r-help@r-project.org



Dear everyone,

I have looked all over the internet but I cannot find a way to solve my problem.

In my data I want to sum a couple of variables. Some of these
variables have NA values, and when I add them together, the result is
NA

dat- data.frame(
id = gl(5,1),
var1 = rnorm(5, 10),
var2 = rnorm(5, 7),
var3 = rnorm(5, 6),
var4 = rnorm(5, 3),
var5 = rnorm(5, 8)
)
dat[3,3]- NA
dat[4,5]- NA


 dat

 id  var1 var2 var3 var4 var5
1  1  9.371328 7.830814 5.032541 3.491053 7.626418
2  2 10.413516 7.333630 6.557178 1.465597 8.591770
3  3 10.967073   NA 6.674079 3.946451 7.251263
4  4  9.900380 7.727111 5.059698   NA 6.632962
5  5  9.191068 7.901271 6.652410 2.734856 8.484757

attach(dat)

dat$sum- var2 + var3 + var4 # I think I'm doing this wrong, but I
don't know what command to use


 dat

  id  var1 var2 var3 var4 var5  sum
1  1  9.371328 7.830814 5.032541 3.491053 7.626418 16.35441
2  2 10.413516 7.333630 6.557178 1.465597 8.591770 15.35640
3  3 10.967073   NA 6.674079 3.946451 7.251263   NA
4  4  9.900380 7.727111 5.059698   NA 6.632962   NA
5  5  9.191068 7.901271 6.652410 2.734856 8.484757 17.28854

I would like to omit the values of NA and just sum the rest.

I tried to use rowSums() but that sums an entire row and I only need a
few variables.

Does anyone know how to do this?

Thanks in advance,
Petra

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.




--
Ivan CALANDRA
Université de Bourgogne
UMR CNRS 5561 Biogéosciences
6 Boulevard Gabriel
21000 Dijon, FRANCE
ivan.calan...@u-bourgogne.fr

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] Fwd: Sum of a couple of variables of which a few have NA values

2012-01-10 Thread PetraOpic
Dear Ivan,

Thank you very much for your help.

How do I use rowSums if I need to skip a variable from summing? (example:
sum var1, var2, var3, var5, var34 only).

Thanks in advance,
Petra Opic

--
View this message in context: 
http://r.789695.n4.nabble.com/Sum-of-a-couple-of-variables-of-which-a-few-have-NA-values-tp4282448p4282969.html
Sent from the R help mailing list archive at Nabble.com.

__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.