Re: [R] RDA Triplot
Since I am doing an RDA with contraints I get this error message when trying to use biplot.rda: 'biplot.rda' not suitable for models with constraints Daniel 2010/11/26 Jari Oksanen [via R] ml-node+3060660-1324000642-57...@n4.nabble.comml-node%2b3060660-1324000642-57...@n4.nabble.com Danielwc daniel.carstensen at gmail.com writes: Im using the VEGAN package to do an RDA ordination. In my plot I get my environmental scores as arrows/vectors, but my species scores as points. I would like to get the species scores as arrows as well. Is there not a way I can tell R to plot both environmental and species scores as arrows/vectors? See ?biplot.rda in vegan. Cheers, Jari Oksanen __ [hidden email] http://user/SendEmail.jtp?type=nodenode=3060660i=0mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.htmlhttp://www.r-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- View message @ http://r.789695.n4.nabble.com/RDA-Triplot-tp3055474p3060660.html To unsubscribe from RDA Triplot, click herehttp://r.789695.n4.nabble.com/template/NamlServlet.jtp?macro=unsubscribe_by_codenode=3055474code=ZGFuaWVsLmNhcnN0ZW5zZW5AZ21haWwuY29tfDMwNTU0NzR8LTM3Mjc5OTMzMA==. -- View this message in context: http://r.789695.n4.nabble.com/RDA-Triplot-tp3055474p3063712.html Sent from the R help mailing list archive at Nabble.com. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] RDA Triplot
Danielwc daniel.carstensen at gmail.com writes: Im using the VEGAN package to do an RDA ordination. In my plot I get my environmental scores as arrows/vectors, but my species scores as points. I would like to get the species scores as arrows as well. Is there not a way I can tell R to plot both environmental and species scores as arrows/vectors? See ?biplot.rda in vegan. Cheers, Jari Oksanen __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] RDA Triplot
Hi Im using the VEGAN package to do an RDA ordination. In my plot I get my environmental scores as arrows/vectors, but my species scores as points. I would like to get the species scores as arrows as well. I tried the envfit function, and this creates arrows, but the lenght is not proportionate to the strengh of the correlation and the point is still there (so I both have point and arrow). fit - envfit(rdawal, dat.one, perm = 999, display = wa) ordiplot(rdawal, type = p) plot(fit, col = red, add = TRUE, scaling = 2) Is there not a way I can tell R to plot both environmental and species scores as arrows/vectors? Thanks -- View this message in context: http://r.789695.n4.nabble.com/RDA-Triplot-tp3055474p3055474.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
