Re: [R] how to remove all messages when loading a library ?

2016-09-25 Thread Fabien Tarrade 

Hi Bert,


?? Dont you already have the answer: you must set warn.conflicts =
FALSE in all your library calls.
Thanks. This works. Now understand the logic but first I was thinking 
that removing WARNING messages should remove conflit warning as well.


Anyway it works.

Thanks
Cheers
Fabien



Cheers,
Bert


Bert Gunter

"The trouble with having an open mind is that people keep coming along
and sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )


On Sun, Sep 25, 2016 at 12:22 PM, Fabien Tarrade
 wrote:

Hi there,

I would like to remove all messages when I load library (I fact I am using
"require" and "install.packages"). I tried many options and look at the
documentation for the 2 functions.
For example I am using the following piece of code: init.R

print("step 1")
# Install library if not installed
if (!require("plyr",quietly=TRUE,warn.conflicts=FALSE))
suppressMessages(install.packages("plyr",quietly=TRUE))
if (!require("dplyr",quietly=TRUE))
suppressMessages(install.packages("dplyr",quietly=TRUE))
if (!require("stringr",quietly=TRUE))
suppressMessages(install.packages("stringr",quietly=TRUE))
if (!require("readr",quietly=TRUE))
suppressMessages(install.packages("readr",quietly=TRUE))
if (!require("tidyr",quietly=TRUE))
suppressMessages(install.packages("tidyr",quietly=TRUE))
if (!require("XML",quietly=TRUE))
suppressMessages(install.packages("XML",quietly=TRUE))
if (!require("Rcpp",quietly=TRUE))
suppressMessages(install.packages("Rcpp",quietly=TRUE))
if (!require("rbenchmark",quietly=TRUE))
suppressMessages(install.packages("rbenchmark",quietly=TRUE))
if (!require("tiff",quietly=TRUE))
suppressMessages(install.packages("tiff",quietly=TRUE))
if (!require("xlsx",quietly=TRUE))
suppressMessages(install.packages("xlsx",quietly=TRUE))
if (!require("ROracle",quietly=TRUE))
suppressMessages(install.packages("T:/CH/R/ROracle_1.2-2.zip", repos = NULL,
type = "source",quietly=TRUE))
print("step 2")

and I run the code in this way:

source("./init.R",encoding =
"UTF-8",verbose=FALSE,echo=FALSE,print.eval=FALSE)

and I get the following output that I don't manage to remove:

[1] "step 1"

Attache Paket: ‘dplyr’

Die folgenden Objekte sind maskiert von ‘package:plyr’:

 arrange, count, desc, failwith, id, mutate, rename, summarise, summarize

Die folgenden Objekte sind maskiert von ‘package:stats’:

 filter, lag

Die folgenden Objekte sind maskiert von ‘package:base’:

 intersect, setdiff, setequal, union
[1] "step 2"

What is the way to get no messages at all when loading library ? ( or using
other R function in general).
I am trying to keep only the important messages and so far I am getting way
too much messages.

Thanks
Cheers
Fabien


--
Dr Fabien Tarrade

Quantitative Analyst/Developer - Data Scientist

Senior data analyst specialised in the modelling, processing and statistical
treatment of data.
PhD in Physics, 10 years of experience as researcher at the forefront of
international scientific research.
Fascinated by finance and data modelling.

Zurich, Switzerland

Email : cont...@fabien-tarrade.eu 
Phone : www.fabien-tarrade.eu 

LinkedIn  Twitter
 Google
 Facebook
 Google 
Xing 
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


--
Dr Fabien Tarrade

Quantitative Analyst/Developer - Data Scientist

Senior data analyst specialised in the modelling, processing and 
statistical treatment of data.
PhD in Physics, 10 years of experience as researcher at the forefront of 
international scientific research.

Fascinated by finance and data modelling.

Geneva, Switzerland

Email : cont...@fabien-tarrade.eu 
Phone : www.fabien-tarrade.eu 
Phone : +33 (0)6 14 78 70 90

LinkedIn  Twitter 
 Google 
 Facebook 
 Google 
 Xing 

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to remove all messages when loading a library ?

2016-09-25 Thread Bert Gunter 
?? Dont you already have the answer: you must set warn.conflicts =
FALSE in all your library calls.


Cheers,
Bert


Bert Gunter

"The trouble with having an open mind is that people keep coming along
and sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )


On Sun, Sep 25, 2016 at 12:22 PM, Fabien Tarrade
 wrote:
> Hi there,
>
> I would like to remove all messages when I load library (I fact I am using
> "require" and "install.packages"). I tried many options and look at the
> documentation for the 2 functions.
> For example I am using the following piece of code: init.R
>
> print("step 1")
> # Install library if not installed
> if (!require("plyr",quietly=TRUE,warn.conflicts=FALSE))
> suppressMessages(install.packages("plyr",quietly=TRUE))
> if (!require("dplyr",quietly=TRUE))
> suppressMessages(install.packages("dplyr",quietly=TRUE))
> if (!require("stringr",quietly=TRUE))
> suppressMessages(install.packages("stringr",quietly=TRUE))
> if (!require("readr",quietly=TRUE))
> suppressMessages(install.packages("readr",quietly=TRUE))
> if (!require("tidyr",quietly=TRUE))
> suppressMessages(install.packages("tidyr",quietly=TRUE))
> if (!require("XML",quietly=TRUE))
> suppressMessages(install.packages("XML",quietly=TRUE))
> if (!require("Rcpp",quietly=TRUE))
> suppressMessages(install.packages("Rcpp",quietly=TRUE))
> if (!require("rbenchmark",quietly=TRUE))
> suppressMessages(install.packages("rbenchmark",quietly=TRUE))
> if (!require("tiff",quietly=TRUE))
> suppressMessages(install.packages("tiff",quietly=TRUE))
> if (!require("xlsx",quietly=TRUE))
> suppressMessages(install.packages("xlsx",quietly=TRUE))
> if (!require("ROracle",quietly=TRUE))
> suppressMessages(install.packages("T:/CH/R/ROracle_1.2-2.zip", repos = NULL,
> type = "source",quietly=TRUE))
> print("step 2")
>
> and I run the code in this way:
>> source("./init.R",encoding =
>> "UTF-8",verbose=FALSE,echo=FALSE,print.eval=FALSE)
>
> and I get the following output that I don't manage to remove:
>
> [1] "step 1"
>
> Attache Paket: ‘dplyr’
>
> Die folgenden Objekte sind maskiert von ‘package:plyr’:
>
> arrange, count, desc, failwith, id, mutate, rename, summarise, summarize
>
> Die folgenden Objekte sind maskiert von ‘package:stats’:
>
> filter, lag
>
> Die folgenden Objekte sind maskiert von ‘package:base’:
>
> intersect, setdiff, setequal, union
> [1] "step 2"
>
> What is the way to get no messages at all when loading library ? ( or using
> other R function in general).
> I am trying to keep only the important messages and so far I am getting way
> too much messages.
>
> Thanks
> Cheers
> Fabien
>
>
> --
> Dr Fabien Tarrade
>
> Quantitative Analyst/Developer - Data Scientist
>
> Senior data analyst specialised in the modelling, processing and statistical
> treatment of data.
> PhD in Physics, 10 years of experience as researcher at the forefront of
> international scientific research.
> Fascinated by finance and data modelling.
>
> Zurich, Switzerland
>
> Email : cont...@fabien-tarrade.eu 
> Phone : www.fabien-tarrade.eu 
>
> LinkedIn  Twitter
>  Google
>  Facebook
>  Google 
> Xing 
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Re: [R] how to remove all messages when loading a library ?

2016-09-25 Thread jim holtman 
Try enclosing the whole thing in "suppressMessages";

suppressMessages({
if (!require("plyr",quietly=TRUE,warn.conflicts=FALSE))
suppressMessages(install.packages("plyr",quietly=TRUE))
if (!require("dplyr",quietly=TRUE))
suppressMessages(install.packages("dplyr",quietly=TRUE))
if (!require("stringr",quietly=TRUE))
suppressMessages(install.packages("stringr",quietly=TRUE))
if (!require("readr",quietly=TRUE))
suppressMessages(install.packages("readr",quietly=TRUE))
if (!require("tidyr",quietly=TRUE))
suppressMessages(install.packages("tidyr",quietly=TRUE))
if (!require("XML",quietly=TRUE))
suppressMessages(install.packages("XML",quietly=TRUE))
if (!require("Rcpp",quietly=TRUE))
suppressMessages(install.packages("Rcpp",quietly=TRUE))
if (!require("rbenchmark",quietly=TRUE))
suppressMessages(install.packages("rbenchmark",quietly=TRUE))
if (!require("tiff",quietly=TRUE))
suppressMessages(install.packages("tiff",quietly=TRUE))
if (!require("xlsx",quietly=TRUE))
suppressMessages(install.packages("xlsx",quietly=TRUE))
if (!require("ROracle",quietly=TRUE))
suppressMessages(install.packages("T:/CH/R/ROracle_1.2-2.zip", repos =
NULL, type = "source",quietly=TRUE))
})




Jim Holtman
Data Munger Guru

What is the problem that you are trying to solve?
Tell me what you want to do, not how you want to do it.

On Sun, Sep 25, 2016 at 3:22 PM, Fabien Tarrade 
wrote:

> Hi there,
>
> I would like to remove all messages when I load library (I fact I am using
> "require" and "install.packages"). I tried many options and look at the
> documentation for the 2 functions.
> For example I am using the following piece of code: init.R
>
> print("step 1")
> # Install library if not installed
> if (!require("plyr",quietly=TRUE,warn.conflicts=FALSE))
> suppressMessages(install.packages("plyr",quietly=TRUE))
> if (!require("dplyr",quietly=TRUE)) suppressMessages(install.packa
> ges("dplyr",quietly=TRUE))
> if (!require("stringr",quietly=TRUE)) suppressMessages(install.packa
> ges("stringr",quietly=TRUE))
> if (!require("readr",quietly=TRUE)) suppressMessages(install.packa
> ges("readr",quietly=TRUE))
> if (!require("tidyr",quietly=TRUE)) suppressMessages(install.packa
> ges("tidyr",quietly=TRUE))
> if (!require("XML",quietly=TRUE)) suppressMessages(install.packa
> ges("XML",quietly=TRUE))
> if (!require("Rcpp",quietly=TRUE)) suppressMessages(install.packa
> ges("Rcpp",quietly=TRUE))
> if (!require("rbenchmark",quietly=TRUE)) suppressMessages(install.packa
> ges("rbenchmark",quietly=TRUE))
> if (!require("tiff",quietly=TRUE)) suppressMessages(install.packa
> ges("tiff",quietly=TRUE))
> if (!require("xlsx",quietly=TRUE)) suppressMessages(install.packa
> ges("xlsx",quietly=TRUE))
> if (!require("ROracle",quietly=TRUE)) suppressMessages(install.packa
> ges("T:/CH/R/ROracle_1.2-2.zip", repos = NULL, type =
> "source",quietly=TRUE))
> print("step 2")
>
> and I run the code in this way:
> > source("./init.R",encoding = "UTF-8",verbose=FALSE,echo=FAL
> SE,print.eval=FALSE)
>
> and I get the following output that I don't manage to remove:
>
> [1] "step 1"
>
> Attache Paket: ‘dplyr’
>
> Die folgenden Objekte sind maskiert von ‘package:plyr’:
>
> arrange, count, desc, failwith, id, mutate, rename, summarise,
> summarize
>
> Die folgenden Objekte sind maskiert von ‘package:stats’:
>
> filter, lag
>
> Die folgenden Objekte sind maskiert von ‘package:base’:
>
> intersect, setdiff, setequal, union
> [1] "step 2"
>
> What is the way to get no messages at all when loading library ? ( or
> using other R function in general).
> I am trying to keep only the important messages and so far I am getting
> way too much messages.
>
> Thanks
> Cheers
> Fabien
>
>
> --
> Dr Fabien Tarrade
>
> Quantitative Analyst/Developer - Data Scientist
>
> Senior data analyst specialised in the modelling, processing and
> statistical treatment of data.
> PhD in Physics, 10 years of experience as researcher at the forefront of
> international scientific research.
> Fascinated by finance and data modelling.
>
> Zurich, Switzerland
>
> Email : cont...@fabien-tarrade.eu 
> Phone : www.fabien-tarrade.eu 
>
> LinkedIn  Twitter <
> https://twitter.com/fabtar> Google  enTarradeProfile/posts> Facebook  en.tarrade.eu> Google  Xing <
> https://www.xing.com/profile/Fabien_Tarrade>
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posti
> ng-guide.html
> and provide commented, minimal, self-contained, reproducible code.

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R-help@r-project.org mailing list

[R] how to remove all messages when loading a library ?

2016-09-25 Thread Fabien Tarrade 

Hi there,

I would like to remove all messages when I load library (I fact I am 
using "require" and "install.packages"). I tried many options and look 
at the documentation for the 2 functions.

For example I am using the following piece of code: init.R

print("step 1")
# Install library if not installed
if (!require("plyr",quietly=TRUE,warn.conflicts=FALSE)) 
suppressMessages(install.packages("plyr",quietly=TRUE))
if (!require("dplyr",quietly=TRUE)) 
suppressMessages(install.packages("dplyr",quietly=TRUE))
if (!require("stringr",quietly=TRUE)) 
suppressMessages(install.packages("stringr",quietly=TRUE))
if (!require("readr",quietly=TRUE)) 
suppressMessages(install.packages("readr",quietly=TRUE))
if (!require("tidyr",quietly=TRUE)) 
suppressMessages(install.packages("tidyr",quietly=TRUE))
if (!require("XML",quietly=TRUE)) 
suppressMessages(install.packages("XML",quietly=TRUE))
if (!require("Rcpp",quietly=TRUE)) 
suppressMessages(install.packages("Rcpp",quietly=TRUE))
if (!require("rbenchmark",quietly=TRUE)) 
suppressMessages(install.packages("rbenchmark",quietly=TRUE))
if (!require("tiff",quietly=TRUE)) 
suppressMessages(install.packages("tiff",quietly=TRUE))
if (!require("xlsx",quietly=TRUE)) 
suppressMessages(install.packages("xlsx",quietly=TRUE))
if (!require("ROracle",quietly=TRUE)) 
suppressMessages(install.packages("T:/CH/R/ROracle_1.2-2.zip", repos = 
NULL, type = "source",quietly=TRUE))

print("step 2")

and I run the code in this way:
> source("./init.R",encoding = 
"UTF-8",verbose=FALSE,echo=FALSE,print.eval=FALSE)


and I get the following output that I don't manage to remove:

[1] "step 1"

Attache Paket: ‘dplyr’

Die folgenden Objekte sind maskiert von ‘package:plyr’:

arrange, count, desc, failwith, id, mutate, rename, summarise, 
summarize


Die folgenden Objekte sind maskiert von ‘package:stats’:

filter, lag

Die folgenden Objekte sind maskiert von ‘package:base’:

intersect, setdiff, setequal, union
[1] "step 2"

What is the way to get no messages at all when loading library ? ( or 
using other R function in general).
I am trying to keep only the important messages and so far I am getting 
way too much messages.


Thanks
Cheers
Fabien


--
Dr Fabien Tarrade

Quantitative Analyst/Developer - Data Scientist

Senior data analyst specialised in the modelling, processing and 
statistical treatment of data.
PhD in Physics, 10 years of experience as researcher at the forefront of 
international scientific research.

Fascinated by finance and data modelling.

Zurich, Switzerland

Email : cont...@fabien-tarrade.eu 
Phone : www.fabien-tarrade.eu 

LinkedIn  Twitter 
 Google 
 Facebook 
 Google 
 Xing 

__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.