Re: [R] Help About R-Package Portability

[Jeff Newmiller]

Your lack of permissions is highly operating-system-specific and 
local-policy-specific and therefore outside the scope of this mailing list... I 
suggest you have a conversation with your system administrator(s). Insuring the 
ability to run R code when the admin is not cooperating is not really something 
we can help with. (Some systems are configured to prevent any executables from 
running off removable media at all.)

You should also read

?.libPaths

as well as the R Installation and Administration manual.

On May 31, 2018 6:02:35 AM PDT, BEDIRHAN CALDIR  wrote:
>Hi,
>
>I'm having an issue with R package configurations which I thought the
>community would help me. I have two softwares written in R, DECoN and
>panelcn.mops, and need to run both of them isolated. The problem is
>that I
>couldn't install them onto neither the OS with the sudo permissions nor
>the
>home folder of a specific user with the right permissions. What I need
>is
>making them as portable as possible by installing R-related packages
>separately once and for all, so that I can run any of them even from a
>USB
>drive where no further R installation would be required. I'll run both
>of
>them from Python as a subprocess.
>
>I'd appreciate any suggession to overcome this issue. Thank you in
>advance.

-- 
Sent from my phone. Please excuse my brevity.

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Re: [R] Help in R package

[David Winsemius]

> On Oct 5, 2017, at 7:19 PM, Akram Alhadainy  wrote:
> 
> Hello,
> 
> I watched your YouTube videos for explanation for R package.

Rhelp is a mailing list. It does not release Youtube videos.

> They are
> really helpful for new beginner for using R. Please I need your help for
> solving inequalities that contain beta functions using R studio. I attached
> the file that contains this inequalities.

We are also not a code writing service and we don't do homework. Please read 
the Posting Guide.


> 
> I appreciate your help and looking forward to hear from you.
> 
> Akram
> __


David Winsemius
Alameda, CA, USA

'Any technology distinguishable from magic is insufficiently advanced.'   
-Gehm's Corollary to Clarke's Third Law

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Re: [R] help with r package "trip"

[Jim Lemon]

Hi Alice,
Have you tried creating a vector of the start position (xpos[1],ypos[1]):

xstart<-rep(xpos[1],n)
ystart<-rep(ypos[1],n)
# where "n" is the number of subsequent positions in the trip
max(trackDistance(xstart,ystart,xpos[2:n],ypos[2:n],...))

may then give you the value of the longest distance from the start. I
don't have the trip package or I could see if you really need to
replicate the start positions.

JIm


On Wed, Jun 15, 2016 at 1:43 PM, Alice Domalik  wrote:
> Hi List,
>
> I'm relatively new to R, so apologies if my question is rather elementary.
> I'm working with some bird tracking data and I would like to calculate the 
> maximum distance traveled from the colony.
> For the maximum distance traveled, I was going to use the function 
> homedist(). However, when I try to use this function I get the following 
> error:
> Error: could not find function "homedist"
> Anyone know why I would get this error? I have been using other functions in 
> "trip" without an issue. Is there an alternative way I can calculate this?
>
> Thanks in advance for any help!
>
> [[alternative HTML version deleted]]
>
> __
> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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> and provide commented, minimal, self-contained, reproducible code.

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Re: [R] Help with R package

[Uwe Ligges]

On 07.06.2014 23:34, Milan Bimali wrote:

Dear R Community,
   I am in process of developing an R package which in turn depends on a
package that is not available in CRAN but has to be downloaded from a web
source (as follows). Could someone guide me on how to include the package
listed in Depends of the Description file. I have the package installed
in my computer:

Source of Package:
source(“http://bioconductor.org/biocLite.R�)
biocLite(“Packagename�)
library(Packagename)



A user just need to set BioC as a default repository as in

setRepositories()

and then install.package(yourPackage) will also automatically install 
the dependencies from BioC.


Best,
Uwe Ligges




Thank you in advance,
Milan

[[alternative HTML version deleted]]



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Re: [R] Help with R package forecast

[jason]

When I type library() to see what is installed the following list in RED
comes up.

Packages in library '/home/jason/R/i686-pc-linux-gnu-library/2.13':

abind   Combine multi-dimensional arrays
aplpack Another Plot PACKage: stem.leaf, bagplot,
faces, spin3R, and some slider functions
biglm   bounded memory linear and generalized linear
models
DBI R Database Interface
forensimStatistical tools for the interpretation of
forensic DNA mixtures
leaps   regression subset selection
quadprogFunctions to solve Quadratic Programming
Problems.
RSQLite SQLite interface for R
RUnit   R Unit test framework
tseries Time series analysis and computational finance
zoo S3 Infrastructure for Regular and Irregular
Time Series (Z's ordered observations)

Packages in library '/usr/lib/R/site-library':

abind   Combine multi-dimensional arrays
car Companion to Applied Regression
chron   Chronological objects which can handle dates
and times
colorspace  Color Space Manipulation
effects Effect Displays for Linear, Generalized Linear,
Multinomial-Logit, and Proportional-Odds Logit
Models
Hmisc   Harrell Miscellaneous
lmtest  Testing Linear Regression Models
multcompSimultaneous Inference in General Parametric
Models
mvtnorm Multivariate Normal and t Distributions
Rcmdr   R Commander
relimp  Relative Contribution of Effects in a
Regression Model
rgl 3D visualization device system (OpenGL)
rkward  Provides some helper functions for the RKWard
frontend
rkwardtests RKWard Plugin Test Suite Framework
sandwichRobust Covariance Matrix Estimators
sm  Smoothing methods for nonparametric regression
and density estimation
strucchange Testing, Monitoring and Dating Structural
Changes
zoo S3 Infrastructure for Regular and Irregular
Time Series (Z's ordered observations)

Packages in library '/usr/lib/R/library':

baseThe R Base Package
bootBootstrap Functions (originally by Angelo Canty
for S)
class   Functions for Classification
cluster Cluster Analysis Extended Rousseeuw et al.
codetools   Code Analysis Tools for R
compilerThe R Compiler Package
datasetsThe R Datasets Package
foreign Read Data Stored by Minitab, S, SAS, SPSS,
Stata, Systat, dBase, ...
graphicsThe R Graphics Package
grDevices   The R Graphics Devices and Support for Colours
and Fonts
gridThe Grid Graphics Package
KernSmooth  Functions for kernel smoothing for Wand  Jones
(1995)
lattice Lattice Graphics
MASSSupport Functions and Datasets for Venables and
Ripley's MASS
Matrix  Sparse and Dense Matrix Classes and Methods
methods Formal Methods and Classes
mgcvGAMs with GCV/AIC/REML smoothness estimation
and GAMMs by PQL
nlmeLinear and Nonlinear Mixed Effects Models
nnetFeed-forward Neural Networks and Multinomial
Log-Linear Models
rpart   Recursive Partitioning
spatial Functions for Kriging and Point Pattern
Analysis
splines Regression Spline Functions and Classes
stats   The R Stats Package
stats4  Statistical Functions using S4 Classes
survivalSurvival analysis, including penalised
likelihood.
tcltk   Tcl/Tk Interface
tools   Tools for Package Development
utils   The R Utils Package



When I type install.packages(), select the mirror, the following list of
packages appears but  the package FORECAST is not listed Please see
attchament http://r.789695.n4.nabble.com/file/n4498680/08.png 

Any suggestions ?

thanks in advance

Jason 

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Re: [R] Help with R package forecast

[Uwe Ligges]

 while yours 
is older. Hence it cannot be offered for you.


Hence upgrade to R-2.15.0 RC.

Uwe Ligges




thanks in advance

Jason

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Re: [R] Help with R package forecast

[David Winsemius]

On Mar 23, 2012, at 8:47 AM, jason wrote:

When I type library() to see what is installed the following list in  
RED

comes up.

Packages in library '/home/jason/R/i686-pc-linux-gnu-library/2.13':


This suggests you are using an old copy of R. Many time the current  
repository will only be serving packages for the current version of R  
and you will need to locate an archived package if you are for some  
reason reluctant to upgrade.




abind   Combine multi-dimensional arrays
aplpack Another Plot PACKage: stem.leaf, bagplot,



snipped useless list. It doesn't matter much what packages you have  
installed as far as what appears on that pick-list,  although I do see  
upon updating package::forecast that it also installed  
Rcpp_0.9.10.tgz'  and RcppArmadillo_0.2.36.tgz'





When I type install.packages(), select the mirror, the following  
list of
packages appears but  the package FORECAST is not listed Please  
see

attchament http://r.789695.n4.nabble.com/file/n4498680/08.png


Well, it would not have been spelled that way, but it's either not in  
that repository (which you didn't tell us) or it's not available for  
your R version and OS combination (which I guess you did tell us.)


--
David Winsemius, MD
West Hartford, CT

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