[R] error message!
Dear R-users, Can some one help me out. I tried installing some packages in R_2.5.1 but I get an error message as shown below. This is unusual since I have been installing and updatings packages in the same version of R. chooseCRANmirror() update.packages(ask='graphics') Error in .readRDS(pfile) : unknown input format or utils:::menuInstallPkgs() Error in .readRDS(pfile) : unknown input format Thanks usman ___ Want ideas for reducing your carbon footprint? Visit Yahoo! For Good http://uk.promotions.yahoo.com/forgood/environment.html [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] error message!
On 26/08/2007 6:13 AM, Usman Shehu wrote: Dear R-users, Can some one help me out. I tried installing some packages in R_2.5.1 but I get an error message as shown below. This is unusual since I have been installing and updatings packages in the same version of R. chooseCRANmirror() update.packages(ask='graphics') Error in .readRDS(pfile) : unknown input format or utils:::menuInstallPkgs() Error in .readRDS(pfile) : unknown input format I'd guess it's a problem with the mirror. Which one did you choose? Do you get the same error if you choose a different one? Duncan Murdoch __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to provide argument when opening RGui from an external application
Thanks for your reply. When you say look into Rscript.exe, do you have a specific document in mind ? I tried to google it but could not find much... I forgot to mention in my first email that I am working under the Windows XP environment. Prof Brian Ripley a écrit : Look into Rscript.exe (on Windows), which is a flexible way to run scripts. Neither using a GUI nor using source() are recommended. On Fri, 24 Aug 2007, Sébastien wrote: Dear R-users, I have written a small application (in visual basic) that automatically generate some R scripts. I would like to execute these scripts when my application is being closed. My problem is that I don't know how to pass the 'source(c:/.../myscript.r)' instruction when I programmatically start RGui. Tinn-R is capable of doing such things, so I guess there must be a way to pass arguments to RGui. Any advice or link to relevant references would be greatly appreciated. Sebastien __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] fill circles
Cristian cristian wrote:
Hi all,
I'm an R newbie,
I did this script to create a scatterplot using the tree matrix from
datasets package:
library('datasets')
with(trees,
{
plot(Height, Volume, pch=3, xlab=Height, ylab=Volume)
symbols(Height, Volume, circles=Girth/12, fg=grey, inches=FALSE,
add=FALSE)
}
)
I'd like to use the column Named Height to fill the circles with colors
(ex.: the small numbers in green then yellow and the high numbers in red).
I'd like to have a legend for the size and the colors too.
I did it manually using a script like that:
color[(x=0.001)(x0.002)]-#41FF41
color[(x=0.002)(x0.003)]-#2BFF2B
color[(x=0.003)(x0.004)]-#09FF09
color[(x=0.004)(x0.005)]-#00FE00
color[(x=0.005)(x0.006)]-#00F700
color[(x=0.006)(x0.007)]-#00E400
color[(x=0.007)(x0.008)]-#00D600
color[(x=0.008)(x0.009)]-#00C300 and so on but I don't like to do it
manually... do know a solution...
Thank you very much
chris
Hi Chris,
You can transform the numeric values in Height into colors using the
color.scale function in the plotrix package. The color.legend function
will allow you to get your legend.
Jim
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Re: [R] How to provide argument when opening RGui from an external application
On 26/08/2007 7:14 AM, Sébastien wrote: Thanks for your reply. When you say look into Rscript.exe, do you have a specific document in mind ? I tried to google it but could not find much... I forgot to mention in my first email that I am working under the Windows XP environment. You could try ?Rscript within R, or Rscript --help from the command line (assuming you have R's bin directory on your path. Duncan Murdoch Prof Brian Ripley a écrit : Look into Rscript.exe (on Windows), which is a flexible way to run scripts. Neither using a GUI nor using source() are recommended. On Fri, 24 Aug 2007, Sébastien wrote: Dear R-users, I have written a small application (in visual basic) that automatically generate some R scripts. I would like to execute these scripts when my application is being closed. My problem is that I don't know how to pass the 'source(c:/.../myscript.r)' instruction when I programmatically start RGui. Tinn-R is capable of doing such things, so I guess there must be a way to pass arguments to RGui. Any advice or link to relevant references would be greatly appreciated. Sebastien __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to provide argument when opening RGui from an external application
There are also some batch files that can be used with Rscript on XP and info in the README here: http://batchfiles.googlecode.com On 8/26/07, Sébastien [EMAIL PROTECTED] wrote: Thanks for your reply. When you say look into Rscript.exe, do you have a specific document in mind ? I tried to google it but could not find much... I forgot to mention in my first email that I am working under the Windows XP environment. Prof Brian Ripley a écrit : Look into Rscript.exe (on Windows), which is a flexible way to run scripts. Neither using a GUI nor using source() are recommended. On Fri, 24 Aug 2007, Sébastien wrote: Dear R-users, I have written a small application (in visual basic) that automatically generate some R scripts. I would like to execute these scripts when my application is being closed. My problem is that I don't know how to pass the 'source(c:/.../myscript.r)' instruction when I programmatically start RGui. Tinn-R is capable of doing such things, so I guess there must be a way to pass arguments to RGui. Any advice or link to relevant references would be greatly appreciated. Sebastien __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R-2.5.1 RedHat EL5 compilation failed
I can't get R-2.5.1 compiled under RedHat EL5 with gcc 4.1.1. Configure failed at the following: checking readline/history.h usability... no checking readline/history.h presence... no checking for readline/history.h... no checking readline/readline.h usability... no checking readline/readline.h presence... no checking for readline/readline.h... no checking for rl_callback_read_char in -lreadline... no checking for main in -lncurses... no checking for main in -ltermcap... no checking for main in -ltermlib... no checking for rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available Thanks. [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to provide argument when opening RGui from an external application
On Sun, 26 Aug 2007, Duncan Murdoch wrote: On 26/08/2007 7:14 AM, Sébastien wrote: Thanks for your reply. When you say look into Rscript.exe, do you have a specific document in mind ? I tried to google it but could not find much... I forgot to mention in my first email that I am working under the Windows XP environment. You could try ?Rscript within R, or Rscript --help from the command line (assuming you have R's bin directory on your path. Or read 'An Introduction to R'. Duncan Murdoch Prof Brian Ripley a écrit : Look into Rscript.exe (on Windows), which is a flexible way to run scripts. Neither using a GUI nor using source() are recommended. On Fri, 24 Aug 2007, Sébastien wrote: Dear R-users, I have written a small application (in visual basic) that automatically generate some R scripts. I would like to execute these scripts when my application is being closed. My problem is that I don't know how to pass the 'source(c:/.../myscript.r)' instruction when I programmatically start RGui. Tinn-R is capable of doing such things, so I guess there must be a way to pass arguments to RGui. Any advice or link to relevant references would be greatly appreciated. Sebastien __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UKFax: +44 1865 272595__ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R-2.5.1 RedHat EL5 compilation failed
Well, the INSTALL file said The main source of information on installation is the `R Installation and Administration Manual', an HTML copy of which is available as file `doc/html/R-admin.html'. Please read that before installing R. But if you are impatient, read on but please refer to the manual to resolve any problems. (If you obtained R using Subversion, the manual is at doc/manual/R-admin.texi.) and this _is_ discussed there. Hint: is readline-devel installed? On Sun, 26 Aug 2007, Wang Chengbin wrote: I can't get R-2.5.1 compiled under RedHat EL5 with gcc 4.1.1. Configure failed at the following: checking readline/history.h usability... no checking readline/history.h presence... no checking for readline/history.h... no checking readline/readline.h usability... no checking readline/readline.h presence... no checking for readline/readline.h... no checking for rl_callback_read_char in -lreadline... no checking for main in -lncurses... no checking for main in -ltermcap... no checking for main in -ltermlib... no checking for rl_callback_read_char in -lreadline... no checking for history_truncate_file... no configure: error: --with-readline=yes (default) and headers/libs are not available Thanks. [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UKFax: +44 1865 272595 __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] How to make an array of data.frames?
Hi, I am still struggling with the data structures in R. I know how it works in C++ but how can I get such a structure in R? Here is what I want: x[a]$dataframe1 x[a]$dataframe2 x[a]$dataframe3 x[b]$dataframe1 x[b]$dataframe2 x[b]$dataframe3 x[c]$dataframe1 x[c]$dataframe2 x[c]$dataframe3 And it would be nice if I could fill in objects a, b, c one at a time successively. What is the easiest way to get such a data structure? It would be great if someone could give me some help with this. Many thanks and kind regards, Werner __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to make an array of data.frames?
Is this what you want: DF1 - DF2 - DF3 - df1 - df2 - df3 - head(iris) list(a = list(DF1, DF2, DF3), b = list(df1, df2, df3)) or x - list() x$a - list(DF1, DF2, DF3) x$b - list(df1, df2, df3) On 8/26/07, Werner Wernersen [EMAIL PROTECTED] wrote: Hi, I am still struggling with the data structures in R. I know how it works in C++ but how can I get such a structure in R? Here is what I want: x[a]$dataframe1 x[a]$dataframe2 x[a]$dataframe3 x[b]$dataframe1 x[b]$dataframe2 x[b]$dataframe3 x[c]$dataframe1 x[c]$dataframe2 x[c]$dataframe3 And it would be nice if I could fill in objects a, b, c one at a time successively. What is the easiest way to get such a data structure? It would be great if someone could give me some help with this. Many thanks and kind regards, Werner __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] fill circles
Hi Christian,
You could use the ggplot2 package (http://had.co.nz/ggplot2) which
takes care of many of these details for you:
qplot(Height, Volume, data=trees, size = Girth)
qplot(Height, Volume, data=trees, size = Girth, colour=Height)
You can find more details on the website about how to customise the
scales for your needs, but the defaults should be pretty good.
Hadley
On 8/25/07, Cristian cristian [EMAIL PROTECTED] wrote:
Hi all,
I'm an R newbie,
I did this script to create a scatterplot using the tree matrix from
datasets package:
library('datasets')
with(trees,
{
plot(Height, Volume, pch=3, xlab=Height, ylab=Volume)
symbols(Height, Volume, circles=Girth/12, fg=grey, inches=FALSE,
add=FALSE)
}
)
I'd like to use the column Named Height to fill the circles with colors
(ex.: the small numbers in green then yellow and the high numbers in red).
I'd like to have a legend for the size and the colors too.
I did it manually using a script like that:
color[(x=0.001)(x0.002)]-#41FF41
color[(x=0.002)(x0.003)]-#2BFF2B
color[(x=0.003)(x0.004)]-#09FF09
color[(x=0.004)(x0.005)]-#00FE00
color[(x=0.005)(x0.006)]-#00F700
color[(x=0.006)(x0.007)]-#00E400
color[(x=0.007)(x0.008)]-#00D600
color[(x=0.008)(x0.009)]-#00C300 and so on but I don't like to do it
manually... do know a solution...
Thank you very much
chris
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--
http://had.co.nz/
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and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to make an array of data.frames?
That gives you a list of data frames. An array is a vector with a dim attribute to to make it into an array add the appropriate dim attirbute. If x is the list we created before then: dim(x) - 2 gives us an array of length 2 each of which has a list of 3 elements or dim(x) - 1:2 gives a 1x2 array or y - list(DF1, DF2, DF3, df1, df2, df3) dim(y) - 3:2 gives a 3x2 array so you can write y[[1,2]] for example. etc. On 8/26/07, Gabor Grothendieck [EMAIL PROTECTED] wrote: Is this what you want: DF1 - DF2 - DF3 - df1 - df2 - df3 - head(iris) list(a = list(DF1, DF2, DF3), b = list(df1, df2, df3)) or x - list() x$a - list(DF1, DF2, DF3) x$b - list(df1, df2, df3) On 8/26/07, Werner Wernersen [EMAIL PROTECTED] wrote: Hi, I am still struggling with the data structures in R. I know how it works in C++ but how can I get such a structure in R? Here is what I want: x[a]$dataframe1 x[a]$dataframe2 x[a]$dataframe3 x[b]$dataframe1 x[b]$dataframe2 x[b]$dataframe3 x[c]$dataframe1 x[c]$dataframe2 x[c]$dataframe3 And it would be nice if I could fill in objects a, b, c one at a time successively. What is the easiest way to get such a data structure? It would be great if someone could give me some help with this. Many thanks and kind regards, Werner __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] error message!
Usman Shehu wrote: It is not. I tried using a number of mirrors, eg Germany, Uk(Bristol), Netherlands, etc. In that case, you'll have to debug it. Run traceback after the error. .readRDS(pfile) is called in several different places; you'll need to find out where it's happening, and why it's failing. The traceback() will tell you where; you can use debug() on that function to single step through until you get to this line, and see what pfile is set to. BTW, please keep the discussion in R-help; someone else may have better contributions than me. Duncan - Original Message From: Duncan Murdoch [EMAIL PROTECTED] To: Usman Shehu [EMAIL PROTECTED] Cc: r-help@stat.math.ethz.ch Sent: Sunday, 26 August, 2007 12:02:13 PM Subject: Re: [R] error message! On 26/08/2007 6:13 AM, Usman Shehu wrote: Dear R-users, Can some one help me out. I tried installing some packages in R_2.5.1 but I get an error message as shown below. This is unusual since I have been installing and updatings packages in the same version of R. chooseCRANmirror() update.packages(ask='graphics') Error in .readRDS(pfile) : unknown input format or utils:::menuInstallPkgs() Error in .readRDS(pfile) : unknown input format I'd guess it's a problem with the mirror. Which one did you choose? Do you get the same error if you choose a different one? Duncan Murdoch ___ Yahoo! Answers - Got a question? Someone out there knows the answer. Try it now. http://uk.answers.yahoo.com/ __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] FAQ 7.x when 7 does not exist. Useability question
Deepayan Sarkar wrote:
On 8/23/07, Duncan Murdoch [EMAIL PROTECTED] wrote:
On 8/23/2007 11:28 AM, Prof Brian Ripley wrote:
On Thu, 23 Aug 2007, John Kane wrote:
The FAQ Section 7 is a very useful place for new users
to find out any number of R idiosycracies. However
there is no numbering on the FAQ Table of Content or
on the Sections Tables of Contents.
Hmm, doc/FAQ does have a numbered table of contents and numbered sections
and doc/manual/R-FAQ.html does have numbered sections and my browser's
search finds 7.10 straight away.
I think the suggestion is to change the contents lists in HTML from ul
lists to ol lists. Then one would see
1. Introduction
2. R Basics
3. R and S
4. R Web Interfaces
5. R Add-On Packages
6. R and Emacs
7. R Miscellanea
8. R Programming
9. R Bugs
10. Acknowledgments
instead of
* Introduction
* R Basics
* R and S
* R Web Interfaces
* R Add-On Packages
* R and Emacs
* R Miscellanea
* R Programming
* R Bugs
* Acknowledgments
in a browser, and I agree that would be preferable (assuming the
numbering is consistent with what we get in the other formats).
However, I don't see how to tell makeinfo --html to do this. Adding
--number-sections isn't enough.
A simple CSS hack is to have
ul{
list-style-type: decimal;
}
in the style. The result can be seen in
http://dsarkar.fhcrc.org/R/RFAQ-1.png
A more sophisticated hack is to have something like
---
body{
counter-reset: chapter;
counter-reset: section;
}
h2.chapter {
counter-increment: chapter;
counter-reset: section;
}
ul {
list-style-type: none;
}
li:before {
counter-increment: section;
content: counter(chapter) . counter(section) ;
}
-
which results in
http://dsarkar.fhcrc.org/R/RFAQ-2.png
The only problem here is that there is no way to distinguish between
the chapter listing and the section listings (both are ul
class=menu). If that could be made to have a different class, the
chapter listing could be improved.
I like the first, simple suggestion best; I'll put it into R-devel.
(With the slight change to use ul.menu instead
of just ul, because FAQ 2.7 includes a plain ul list.)
Duncan Murdoch
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[R] How is R CMD INSTALL --help executed?
Installation Configuration: Windows XP version 5.1 with Service Pack 2, Rtools (bin, MnGW, perl), and HTML HelpWorkshop, and R-2.5.1. Files Located: Scrips build, check and install are in C:\Program Files\R\R-2.5.1\bin. Path Verified: Windows path begins with c:\Rtools\bin; c:\Rtools\perl\bin; c:\Rtools\MinGW\bin; (without quotes). Documents Being Read: Writing R Extensions, and The Windows toolset in R-admin. The Problem: The example in R Help package.skeleton was created and the produced files were edited. In what window, at what prompt, or in what other way is R CMD INSTALL --help entered or executed? What additional setup is required for the system to recognize this command? Found example R CMD build --force --binary --auto-zip %1 pkgname in search.R-project.org . What must be done so system can find package pkgname? Bill Morphet ATK Launch Systems, RSRM Postfire Evaluation Eng---BeginMessage--- ---BeginMessage--- ---End Message--- ---End Message--- __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Program of matrix of seasonal dummy variable(Econometrics)
Dear R users,
I would like to construct a matrix of seasonal dummy variables, such matrix can
be written as follows(i.e format(T,4))
10 0 0
01 0 0
00 1 0
00 0 1
10 0 0
01 0 0
00 1 0
00 0 1
10 0 0
01 0 0
00 1 0
00 0 1
.. ..
.. . .
etc
I have written the following small program:
T=100
br-matrix(0,T,4)
for (i in 1:T)
{
+ for (j in 1:4)
{
+ if i=j
{+ br[i,j]=1
+ }
+ if else (abs(i-j)%%4==0)
{+ br[i,j]=1
+}
+ else
{+ br[i,j]=0
+}
+}
+}
I have obtained the following message from R consol:
T=100
br-matrix(0,T,4)
for (i in 1:T)
+ {
+ + for (j in 1:4)
+ {
++ if i=j
Erreur : syntax error, unexpected SYMBOL, expecting '(' dans :
{+ br[i,j]=1
+ + }
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=1
+ if else (abs(i-j)%%4==0)
Erreur : syntax error, unexpected ELSE, expecting '(' dans+ if else
{+ br[i,j]=1
+ +}
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=1
+ else
Erreur : syntax error, unexpected ELSE dans+ else
{+ br[i,j]=0
+ +}
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=0
+}
Erreur : syntax error, unexpected '}' dans +}
+}
Erreur : syntax error, unexpected '}' dans +}
I would require if you can rectify my program in order to obtain this matrix of
seasonal dummies. Many thanks in advance.
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and provide commented, minimal, self-contained, reproducible code.
[R] IRT model nonparametric from Ramsay in R
Hi: I need to apply the IRT model from Ramsay (1991), He apply the Smoothing Kernel to multiple choice test. Is possible in R?. Thank you, Xavier G. Ordonez Doctoral Student __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] partial AUC and SE in R
Hi, I need to apply the Partial AUC in ROC curves. How I do this?. And I need the SE of partial AUC too. I have been reading ?caTool, ?Epi, ?verification, ?ROC, ?ROCR, ?genefilter and more. I only see the partial AUC, but I do not the SE. Thank you, if you can help me. Xavier G. Ordoñez Doctoral Student __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How is R CMD INSTALL --help executed?
On 26/08/2007 3:55 PM, [EMAIL PROTECTED] wrote: Installation Configuration: Windows XP version 5.1 with Service Pack 2, Rtools (bin, MnGW, perl), and HTML HelpWorkshop, and R-2.5.1. Files Located: Scrips build, check and install are in C:\Program Files\R\R-2.5.1\bin. Path Verified: Windows path begins with c:\Rtools\bin; c:\Rtools\perl\bin; c:\Rtools\MinGW\bin; (without quotes). Documents Being Read: Writing R Extensions, and The Windows toolset in R-admin. The Problem: The example in R Help package.skeleton was created and the produced files were edited. In what window, at what prompt, or in what other way is R CMD INSTALL --help entered or executed? At a command prompt, i.e. in a DOS window, or Cygwin, or some other shell, outside of R. What additional setup is required for the system to recognize this command? What you list above should be sufficient. Duncan Murdoch Found example R CMD build --force --binary --auto-zip %1 pkgname in search.R-project.org . What must be done so system can find package pkgname? Bill Morphet ATK Launch Systems, RSRM Postfire Evaluation Eng Subject: Returned mail: User unknown From: [EMAIL PROTECTED] (Webmail Postmaster) Date: Sun, 26 Aug 2007 17:43:16 + To: [EMAIL PROTECTED] To: [EMAIL PROTECTED] Subject: How is R CMD INSTALL --help executed? From: [EMAIL PROTECTED] Date: Sun, 26 Aug 2007 17:43:15 + To: r-help_at_stat.math.ethz.ch To: r-help_at_stat.math.ethz.ch BCC: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Program of matrix of seasonal dummy variable(Econometrics)
Try this:
kronecker(rep(1, 3), diag(4))
[,1] [,2] [,3] [,4]
[1,]1000
[2,]0100
[3,]0010
[4,]0001
[5,]1000
[6,]0100
[7,]0010
[8,]0001
[9,]1000
[10,]0100
[11,]0010
[12,]0001
On 8/26/07, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote:
Dear R users,
I would like to construct a matrix of seasonal dummy variables, such matrix
can be written as follows(i.e format(T,4))
10 0 0
01 0 0
00 1 0
00 0 1
10 0 0
01 0 0
00 1 0
00 0 1
10 0 0
01 0 0
00 1 0
00 0 1
.. ..
.. . .
etc
I have written the following small program:
T=100
br-matrix(0,T,4)
for (i in 1:T)
{
+ for (j in 1:4)
{
+ if i=j
{+ br[i,j]=1
+ }
+ if else (abs(i-j)%%4==0)
{+ br[i,j]=1
+}
+ else
{+ br[i,j]=0
+}
+}
+}
I have obtained the following message from R consol:
T=100
br-matrix(0,T,4)
for (i in 1:T)
+ {
+ + for (j in 1:4)
+ {
++ if i=j
Erreur : syntax error, unexpected SYMBOL, expecting '(' dans :
{+ br[i,j]=1
+ + }
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=1
+ if else (abs(i-j)%%4==0)
Erreur : syntax error, unexpected ELSE, expecting '(' dans+ if else
{+ br[i,j]=1
+ +}
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=1
+ else
Erreur : syntax error, unexpected ELSE dans+ else
{+ br[i,j]=0
+ +}
Erreur : syntax error, unexpected '}' dans {+ br[i,j]=0
+}
Erreur : syntax error, unexpected '}' dans +}
+}
Erreur : syntax error, unexpected '}' dans +}
I would require if you can rectify my program in order to obtain this matrix
of seasonal dummies. Many thanks in advance.
[[alternative HTML version deleted]]
__
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https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
__
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https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] subset using noncontiguous variables by name (not index)
Hi All, I'm using the subset function to select a list of variables, some of which are contiguous in the data frame, and others of which are not. It works fine when I use the form: subset(mydata,select=c(x1,x3:x5,x7) ) In reality, my list is far more complex. So I would like to store it in a variable to substitute in for c(x1,x3:x5,x7) but cannot get it to work. That use of the c function seems to violate R rules, so I'm not sure how it works at all. A small simulation of the problem is below. If the variable names orders were really this simple, I could use indices like summary( mydata[ ,c(1,3:5,7) ] ) but alas, they are not. How does the c function work this way in the first place, and how can I make this substitution? Thanks, Bob mydata - data.frame( x1=c(1,2,3,4,5), x2=c(1,2,3,4,5), x3=c(1,2,3,4,5), x4=c(1,2,3,4,5), x5=c(1,2,3,4,5), x6=c(1,2,3,4,5), x7=c(1,2,3,4,5) ) mydata # This does what I want. summary( subset(mydata,select=c(x1,x3:x5,x7) ) ) # Can I substitute myVars? attach(mydata) myVars1 - c(x1,x3:x5,x7) # Not looking good! myVars1 # This doesn't do the right thing. summary( subset(mydata,select=myVars1 ) ) # Total desperation on this attempt: myVars2 - x1,x3:x5,x7 myVars2 # This doesn't work either. summary( subset(mydata,select=myVars2 ) ) = Bob Muenchen (pronounced Min'-chen), Manager Statistical Consulting Center U of TN Office of Information Technology 200 Stokely Management Center, Knoxville, TN 37996-0520 Voice: (865) 974-5230 FAX: (865) 974-4810 Email: [EMAIL PROTECTED] Web: http://oit.utk.edu/scc, News: http://listserv.utk.edu/archives/statnews.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] subset using noncontiguous variables by name (not index)
Using builtin data frame anscombe try this. First we set up a data frame anscombe.seq which has one row containing 1, 2, 3, ... . Then select out from that data frame and unlist it to get the desired index vector. anscombe.seq - replace(anscombe[1,], TRUE, seq_along(anscombe)) idx - unlist(subset(anscombe.seq, select = c(x1, x3:x4, y2))) anscombe[idx] x1 x3 x4 y2 1 10 10 8 9.14 2 8 8 8 8.14 3 13 13 8 8.74 4 9 9 8 8.77 5 11 11 8 9.26 6 14 14 8 8.10 7 6 6 8 6.13 8 4 4 19 3.10 9 12 12 8 9.13 10 7 7 8 7.26 11 5 5 8 4.74 On 8/26/07, Muenchen, Robert A (Bob) [EMAIL PROTECTED] wrote: Hi All, I'm using the subset function to select a list of variables, some of which are contiguous in the data frame, and others of which are not. It works fine when I use the form: subset(mydata,select=c(x1,x3:x5,x7) ) In reality, my list is far more complex. So I would like to store it in a variable to substitute in for c(x1,x3:x5,x7) but cannot get it to work. That use of the c function seems to violate R rules, so I'm not sure how it works at all. A small simulation of the problem is below. If the variable names orders were really this simple, I could use indices like summary( mydata[ ,c(1,3:5,7) ] ) but alas, they are not. How does the c function work this way in the first place, and how can I make this substitution? Thanks, Bob mydata - data.frame( x1=c(1,2,3,4,5), x2=c(1,2,3,4,5), x3=c(1,2,3,4,5), x4=c(1,2,3,4,5), x5=c(1,2,3,4,5), x6=c(1,2,3,4,5), x7=c(1,2,3,4,5) ) mydata # This does what I want. summary( subset(mydata,select=c(x1,x3:x5,x7) ) ) # Can I substitute myVars? attach(mydata) myVars1 - c(x1,x3:x5,x7) # Not looking good! myVars1 # This doesn't do the right thing. summary( subset(mydata,select=myVars1 ) ) # Total desperation on this attempt: myVars2 - x1,x3:x5,x7 myVars2 # This doesn't work either. summary( subset(mydata,select=myVars2 ) ) = Bob Muenchen (pronounced Min'-chen), Manager Statistical Consulting Center U of TN Office of Information Technology 200 Stokely Management Center, Knoxville, TN 37996-0520 Voice: (865) 974-5230 FAX: (865) 974-4810 Email: [EMAIL PROTECTED] Web: http://oit.utk.edu/scc, News: http://listserv.utk.edu/archives/statnews.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] subset using noncontiguous variables by name (not index)
[Muenchen, Robert A (Bob)] I'm using the subset function to select a list of variables, some of which are contiguous in the data frame, and others of which are not. It works fine when I use the form: subset(mydata,select=c(x1,x3:x5,x7)) In reality, my list is far more complex. So I would like to store it in a variable to substitute in for c(x1,x3:x5,x7) but cannot get it to work. That use of the c function seems to violate R rules, so I'm not sure how it works at all. A small simulation of the problem is below. mydata - data.frame( x1=c(1,2,3,4,5), x2=c(1,2,3,4,5), x3=c(1,2,3,4,5), x4=c(1,2,3,4,5), x5=c(1,2,3,4,5), x6=c(1,2,3,4,5), x7=c(1,2,3,4,5) ) mydata # This does what I want. summary(subset(mydata, select=c(x1, x3:x5, x7))) Maybe: variables - expression(c(x1, x3:x5, x7)) and later: summary(subset(mydata, select=eval(variables))) However, I do not know how one computes the expression piecemeal, that is, better than by building a string and parsing the result. -- François Pinard http://pinard.progiciels-bpi.ca __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] subset using noncontiguous variables by name (not index)
The problem is that x3:x5 does not mean what you think it means. The only reason it does the right thing in subset() is because a clever trick is used there (read the code -- it's not hard to understand) to ensure that it does. Gabor has essentially mimicked that trick in his solution. However, it is not necessary do this. You can construct the call directly as you tried to do. Using the anscombe example, here's how: chooz - c(x1,x3:x4,y2) ## enclose the desired expression in quotes do.call (subset, list( x = anscombe, select = parse(text = chooz))) -- Bert Gunter Genentech Non-Clinical Statistics South San Francisco, CA The business of the statistician is to catalyze the scientific learning process. - George E. P. Box -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Gabor Grothendieck Sent: Sunday, August 26, 2007 2:10 PM To: Muenchen, Robert A (Bob) Cc: r-help@stat.math.ethz.ch Subject: Re: [R] subset using noncontiguous variables by name (not index) Using builtin data frame anscombe try this. First we set up a data frame anscombe.seq which has one row containing 1, 2, 3, ... . Then select out from that data frame and unlist it to get the desired index vector. anscombe.seq - replace(anscombe[1,], TRUE, seq_along(anscombe)) idx - unlist(subset(anscombe.seq, select = c(x1, x3:x4, y2))) anscombe[idx] x1 x3 x4 y2 1 10 10 8 9.14 2 8 8 8 8.14 3 13 13 8 8.74 4 9 9 8 8.77 5 11 11 8 9.26 6 14 14 8 8.10 7 6 6 8 6.13 8 4 4 19 3.10 9 12 12 8 9.13 10 7 7 8 7.26 11 5 5 8 4.74 On 8/26/07, Muenchen, Robert A (Bob) [EMAIL PROTECTED] wrote: Hi All, I'm using the subset function to select a list of variables, some of which are contiguous in the data frame, and others of which are not. It works fine when I use the form: subset(mydata,select=c(x1,x3:x5,x7) ) In reality, my list is far more complex. So I would like to store it in a variable to substitute in for c(x1,x3:x5,x7) but cannot get it to work. That use of the c function seems to violate R rules, so I'm not sure how it works at all. A small simulation of the problem is below. If the variable names orders were really this simple, I could use indices like summary( mydata[ ,c(1,3:5,7) ] ) but alas, they are not. How does the c function work this way in the first place, and how can I make this substitution? Thanks, Bob mydata - data.frame( x1=c(1,2,3,4,5), x2=c(1,2,3,4,5), x3=c(1,2,3,4,5), x4=c(1,2,3,4,5), x5=c(1,2,3,4,5), x6=c(1,2,3,4,5), x7=c(1,2,3,4,5) ) mydata # This does what I want. summary( subset(mydata,select=c(x1,x3:x5,x7) ) ) # Can I substitute myVars? attach(mydata) myVars1 - c(x1,x3:x5,x7) # Not looking good! myVars1 # This doesn't do the right thing. summary( subset(mydata,select=myVars1 ) ) # Total desperation on this attempt: myVars2 - x1,x3:x5,x7 myVars2 # This doesn't work either. summary( subset(mydata,select=myVars2 ) ) = Bob Muenchen (pronounced Min'-chen), Manager Statistical Consulting Center U of TN Office of Information Technology 200 Stokely Management Center, Knoxville, TN 37996-0520 Voice: (865) 974-5230 FAX: (865) 974-4810 Email: [EMAIL PROTECTED] Web: http://oit.utk.edu/scc, News: http://listserv.utk.edu/archives/statnews.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] subset using noncontiguous variables by name (not index)
Thanks Bert Gabor for two very interesting solutions! It would be very handy in R if string1:stringN generated string1,string2...stringN it would make selections like this much more obvious. I know it's easy to with the colon operator and paste function but that's quite a step up in complexity compared to SAS' x1 x3-x4 y2 or SPSS' x1,x3 to x4, y2. And it's complexity that beginners face early in learning R. While on the subject of the colon operator, why doesn't anscombe[[1:4]] select the x variables in list form as anscombe[,1:4] or anscombe[1:4] do in data frame form? Thanks, Bob = Bob Muenchen (pronounced Min'-chen), Manager Statistical Consulting Center U of TN Office of Information Technology 200 Stokely Management Center, Knoxville, TN 37996-0520 Voice: (865) 974-5230 FAX: (865) 974-4810 Email: [EMAIL PROTECTED] Web: http://oit.utk.edu/scc, News: http://listserv.utk.edu/archives/statnews.html = -Original Message- From: Bert Gunter [mailto:[EMAIL PROTECTED] Sent: Sunday, August 26, 2007 6:50 PM To: 'Gabor Grothendieck'; Muenchen, Robert A (Bob) Cc: r-help@stat.math.ethz.ch Subject: RE: [R] subset using noncontiguous variables by name (not index) The problem is that x3:x5 does not mean what you think it means. The only reason it does the right thing in subset() is because a clever trick is used there (read the code -- it's not hard to understand) to ensure that it does. Gabor has essentially mimicked that trick in his solution. However, it is not necessary do this. You can construct the call directly as you tried to do. Using the anscombe example, here's how: chooz - c(x1,x3:x4,y2) ## enclose the desired expression in quotes do.call (subset, list( x = anscombe, select = parse(text = chooz))) -- Bert Gunter Genentech Non-Clinical Statistics South San Francisco, CA The business of the statistician is to catalyze the scientific learning process. - George E. P. Box -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Gabor Grothendieck Sent: Sunday, August 26, 2007 2:10 PM To: Muenchen, Robert A (Bob) Cc: r-help@stat.math.ethz.ch Subject: Re: [R] subset using noncontiguous variables by name (not index) Using builtin data frame anscombe try this. First we set up a data frame anscombe.seq which has one row containing 1, 2, 3, ... . Then select out from that data frame and unlist it to get the desired index vector. anscombe.seq - replace(anscombe[1,], TRUE, seq_along(anscombe)) idx - unlist(subset(anscombe.seq, select = c(x1, x3:x4, y2))) anscombe[idx] x1 x3 x4 y2 1 10 10 8 9.14 2 8 8 8 8.14 3 13 13 8 8.74 4 9 9 8 8.77 5 11 11 8 9.26 6 14 14 8 8.10 7 6 6 8 6.13 8 4 4 19 3.10 9 12 12 8 9.13 10 7 7 8 7.26 11 5 5 8 4.74 On 8/26/07, Muenchen, Robert A (Bob) [EMAIL PROTECTED] wrote: Hi All, I'm using the subset function to select a list of variables, some of which are contiguous in the data frame, and others of which are not. It works fine when I use the form: subset(mydata,select=c(x1,x3:x5,x7) ) In reality, my list is far more complex. So I would like to store it in a variable to substitute in for c(x1,x3:x5,x7) but cannot get it to work. That use of the c function seems to violate R rules, so I'm not sure how it works at all. A small simulation of the problem is below. If the variable names orders were really this simple, I could use indices like summary( mydata[ ,c(1,3:5,7) ] ) but alas, they are not. How does the c function work this way in the first place, and how can I make this substitution? Thanks, Bob mydata - data.frame( x1=c(1,2,3,4,5), x2=c(1,2,3,4,5), x3=c(1,2,3,4,5), x4=c(1,2,3,4,5), x5=c(1,2,3,4,5), x6=c(1,2,3,4,5), x7=c(1,2,3,4,5) ) mydata # This does what I want. summary( subset(mydata,select=c(x1,x3:x5,x7) ) ) # Can I substitute myVars? attach(mydata) myVars1 - c(x1,x3:x5,x7) # Not looking good! myVars1 # This doesn't do the right thing. summary( subset(mydata,select=myVars1 ) ) # Total desperation on this attempt: myVars2 - x1,x3:x5,x7 myVars2 # This doesn't work either. summary( subset(mydata,select=myVars2 ) ) = Bob Muenchen (pronounced Min'-chen), Manager Statistical Consulting Center U of TN Office of Information Technology 200 Stokely Management Center, Knoxville, TN 37996-0520 Voice: (865) 974-5230 FAX: (865) 974-4810 Email: [EMAIL PROTECTED] Web: http://oit.utk.edu/scc, News: http://listserv.utk.edu/archives/statnews.html __
Re: [R] subset using noncontiguous variables by name (not index)
Try this:
%:% - function(x, y) {
+prex - gsub([0-9], , x); postx - gsub([^0-9], , x)
+prey - gsub([0-9], , y); posty - gsub([^0-9], , y)
+stopifnot(prex == prey)
+paste(prex, seq(from = as.numeric(postx), to =
as.numeric(posty)), sep = )
+ }
x2 %:% x4
[1] x2 x3 x4
On 8/26/07, Muenchen, Robert A (Bob) [EMAIL PROTECTED] wrote:
Thanks Bert Gabor for two very interesting solutions!
It would be very handy in R if string1:stringN generated
string1,string2...stringN it would make selections like this much
more obvious. I know it's easy to with the colon operator and paste
function but that's quite a step up in complexity compared to SAS' x1
x3-x4 y2 or SPSS' x1,x3 to x4, y2. And it's complexity that beginners
face early in learning R.
While on the subject of the colon operator, why doesn't anscombe[[1:4]]
select the x variables in list form as anscombe[,1:4] or anscombe[1:4]
do in data frame form?
Thanks,
Bob
=
Bob Muenchen (pronounced Min'-chen), Manager
Statistical Consulting Center
U of TN Office of Information Technology
200 Stokely Management Center, Knoxville, TN 37996-0520
Voice: (865) 974-5230
FAX: (865) 974-4810
Email: [EMAIL PROTECTED]
Web: http://oit.utk.edu/scc,
News: http://listserv.utk.edu/archives/statnews.html
=
-Original Message-
From: Bert Gunter [mailto:[EMAIL PROTECTED]
Sent: Sunday, August 26, 2007 6:50 PM
To: 'Gabor Grothendieck'; Muenchen, Robert A (Bob)
Cc: r-help@stat.math.ethz.ch
Subject: RE: [R] subset using noncontiguous variables by name (not
index)
The problem is that x3:x5 does not mean what you think it means. The
only
reason it does the right thing in subset() is because a clever trick
is
used
there (read the code -- it's not hard to understand) to ensure that it
does.
Gabor has essentially mimicked that trick in his solution.
However, it is not necessary do this. You can construct the call
directly as
you tried to do. Using the anscombe example, here's how:
chooz - c(x1,x3:x4,y2) ## enclose the desired expression in quotes
do.call (subset, list( x = anscombe, select = parse(text = chooz)))
-- Bert Gunter
Genentech Non-Clinical Statistics
South San Francisco, CA
The business of the statistician is to catalyze the scientific
learning
process. - George E. P. Box
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Gabor
Grothendieck
Sent: Sunday, August 26, 2007 2:10 PM
To: Muenchen, Robert A (Bob)
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] subset using noncontiguous variables by name
(not index)
Using builtin data frame anscombe try this. First we set up a
data frame
anscombe.seq which has one row containing 1, 2, 3, ... . Then
select
out from that data frame and unlist it to get the desired
index vector.
anscombe.seq - replace(anscombe[1,], TRUE, seq_along(anscombe))
idx - unlist(subset(anscombe.seq, select = c(x1, x3:x4, y2)))
anscombe[idx]
x1 x3 x4 y2
1 10 10 8 9.14
2 8 8 8 8.14
3 13 13 8 8.74
4 9 9 8 8.77
5 11 11 8 9.26
6 14 14 8 8.10
7 6 6 8 6.13
8 4 4 19 3.10
9 12 12 8 9.13
10 7 7 8 7.26
11 5 5 8 4.74
On 8/26/07, Muenchen, Robert A (Bob) [EMAIL PROTECTED] wrote:
Hi All,
I'm using the subset function to select a list of variables, some
of
which are contiguous in the data frame, and others of which
are not. It
works fine when I use the form:
subset(mydata,select=c(x1,x3:x5,x7) )
In reality, my list is far more complex. So I would like to
store it in
a variable to substitute in for c(x1,x3:x5,x7) but cannot get it
to
work. That use of the c function seems to violate R rules,
so I'm not
sure how it works at all. A small simulation of the problem
is below.
If the variable names orders were really this simple, I could
use
indices like
summary( mydata[ ,c(1,3:5,7) ] )
but alas, they are not.
How does the c function work this way in the first place,
and how can I
make this substitution?
Thanks,
Bob
mydata - data.frame(
x1=c(1,2,3,4,5),
x2=c(1,2,3,4,5),
x3=c(1,2,3,4,5),
x4=c(1,2,3,4,5),
x5=c(1,2,3,4,5),
x6=c(1,2,3,4,5),
x7=c(1,2,3,4,5)
)
mydata
# This does what I want.
summary(
subset(mydata,select=c(x1,x3:x5,x7) )
)
# Can I substitute myVars?
attach(mydata)
myVars1 - c(x1,x3:x5,x7)
# Not looking good!
myVars1
# This doesn't do the right thing.
summary(
subset(mydata,select=myVars1 )
)
# Total desperation on this attempt:
myVars2 - x1,x3:x5,x7
myVars2
# This doesn't work either.
summary(
[R] Help on coxph
I am new to R. I just installed R2.5.1 in my computer and tried to use coxph, but it gives me this message: No documentation for 'coxph' in specified packages and libraries: you could try 'help.search(coxph)' can anyone tell me how to install this package? thanks a lot [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] Help on coxph
In the R-surface menu, go to packages - install packages. Select a server and install the package survival. Then, on the prompt, type: library(survival) Then it works. Look up the numerous manual on using R if you need further help. If that's not the issue, give us more detailed information on the problem. Daniel PhD Program Strategy Dept. of Management and Organization Robert H. Smith School of Business University of Maryland Van Munching Hall College Park, MD 20742 www.rhsmith.umd.edu www.umd.edu mailto:[EMAIL PROTECTED] mailto:[EMAIL PROTECTED] -Ursprüngliche Nachricht- Von: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Im Auftrag von Wei Hu Gesendet: Sunday, August 26, 2007 9:49 PM An: r-help@stat.math.ethz.ch Betreff: [R] Help on coxph I am new to R. I just installed R2.5.1 in my computer and tried to use coxph, but it gives me this message: No documentation for 'coxph' in specified packages and libraries: you could try 'help.search(coxph)' can anyone tell me how to install this package? thanks a lot [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R 2.5.1 - Rscript through tee
Hi, people. I met a little problem for which someone might have a solution. Let's say I have an executable file (named pp.R) with this contents: #!/usr/bin/Rscript options(echo=TRUE) a - 1 Sys.sleep(3) a - 2 If I execute ./pp.R at the shell prompt, the output shows the timely progress of the script as expected. If I use ./pp.R | tee OUT instead, the output seems buffered and I see it all at once at the end. The problem does not come from the tee program, as if I use this command: (echo a; sleep 5; echo b) | tee OUT the output is timely, not batched. So, is there a way to tell R (or Rscript) that standard output should be unbuffered, even if it is not directly connected to a terminal? In case useful, here is local R information: Version: platform = x86_64-unknown-linux-gnu arch = x86_64 os = linux-gnu system = x86_64, linux-gnu status = major = 2 minor = 5.1 year = 2007 month = 06 day = 27 svn rev = 42083 language = R version.string = R version 2.5.1 (2007-06-27) Locale: LC_CTYPE=fr_CA.UTF-8;LC_NUMERIC=C;LC_TIME=fr_CA.UTF-8;LC_COLLATE=fr_CA.UTF-8;LC_MONETARY=fr_CA.UTF-8;LC_MESSAGES=fr_CA.UTF-8;LC_PAPER=fr_CA.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=fr_CA.UTF-8;LC_IDENTIFICATION=C Search Path: .GlobalEnv, package:stats, package:utils, package:datasets, fp.etc, package:graphics, package:grDevices, package:methods, Autoloads, package:base -- François Pinard http://pinard.progiciels-bpi.ca __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
