Re: [R] Unbalanced Manova

2006-04-01 Thread Spencer Graves
  What have you tried?  I just did help.searhc(manova), which led me 
to manova and summary.manova, which contained a balanced example, which 
I unbalanced as follows:

tear - c(6.5, 6.2, 5.8, 6.5, 6.5, 6.9, 7.2, 6.9, 6.1, 6.3,
6.7, 6.6, 7.2, 7.1, 6.8, 7.1, 7.0, 7.2, 7.5, 7.6)
gloss - c(9.5, 9.9, 9.6, 9.6, 9.2, 9.1, 10.0, 9.9, 9.5, 9.4,
 9.1, 9.3, 8.3, 8.4, 8.5, 9.2, 8.8, 9.7, 10.1, 9.2)
opacity - c(4.4, 6.4, 3.0, 4.1, 0.8, 5.7, 2.0, 3.9, 1.9, 5.7,
   2.8, 4.1, 3.8, 1.6, 3.4, 8.4, 5.2, 6.9, 2.7, 1.9)
rate - factor(gl(2,10), labels=c(Low, High))
additive - factor(gl(2, 5, len=20), labels=c(Low, High))
DF - data.frame(tear, gloss, opacity, rate, additive)

fit - manova(cbind(tear, gloss, opacity) ~ rate * additive, DF)
f18 - manova(cbind(tear, gloss, opacity) ~ rate * additive, DF[1:18,])
summary(fit, test=Wilks) # ANOVA table of Wilks' lambda

   summary(fit, test=Wilks) # ANOVA table of Wilks' lambda
   Df  Wilks approx F num Df den Df   Pr(F)
rate   1 0.3819   7.5543  3 14 0.003034 **
additive   1 0.5230   4.2556  3 14 0.024745 *
rate:additive  1 0.7771   1.3385  3 14 0.301782
Residuals 16
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
   summary(f18, test=Wilks) # ANOVA table of Wilks' lambda
   Df  Wilks approx F num Df den Df   Pr(F)
rate   1 0.3743   6.6880  3 12 0.006637 **
additive   1 0.5825   2.8671  3 12 0.080857 .
rate:additive  1 0.7012   1.7047  3 12 0.218966
Residuals 14
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
 
  If you would like further help from this listserve, PLEASE do read 
the posting guide! www.R-project.org/posting-guide.html and provide a 
self-contained example of what you tried, explaining why it does not 
meet your needs.

  hope this helps,
  spencer graves

Naiara S. Pinto wrote:

 Dear all,
 
 I need to do a Manova but I have an unbalanced design. I have
 morphological measurements similar to the iris dataset, but I don't have
 the same number of measurements for all species. Does anyone know a
 procedure to do Manova with this kind of input in R?
 
 Thank you very much,
 
 Naiara.
 
 
 Naiara S. Pinto
 Ecology, Evolution and Behavior
 1 University Station A6700
 Austin, TX, 78712
 
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Re: [R] Unbalanced Manova

2006-04-01 Thread Peter Dalgaard
Naiara S. Pinto [EMAIL PROTECTED] writes:

 Dear all,
 
 I need to do a Manova but I have an unbalanced design. I have
 morphological measurements similar to the iris dataset, but I don't have
 the same number of measurements for all species. Does anyone know a
 procedure to do Manova with this kind of input in R?
 
 Thank you very much,

If you have complete *responses*, the anova and summary methods for
mlm objects (from lm(Y~) where Y is a matrix) should do it. 

-- 
   O__   Peter Dalgaard Ă˜ster Farimagsgade 5, Entr.B
  c/ /'_ --- Dept. of Biostatistics PO Box 2099, 1014 Cph. K
 (*) \(*) -- University of Copenhagen   Denmark  Ph:  (+45) 35327918
~~ - ([EMAIL PROTECTED])  FAX: (+45) 35327907

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[R] Unbalanced Manova

2006-03-30 Thread Naiara S. Pinto
Dear all,

I need to do a Manova but I have an unbalanced design. I have
morphological measurements similar to the iris dataset, but I don't have
the same number of measurements for all species. Does anyone know a
procedure to do Manova with this kind of input in R?

Thank you very much,

Naiara.


Naiara S. Pinto
Ecology, Evolution and Behavior
1 University Station A6700
Austin, TX, 78712

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