[R] help with scatterplot3d

2007-08-13 Thread Ryan Briscoe Runquist

Hello,

I am having a bit of trouble with scatterplot3d().

I was able to plot a 3d cloud of points using the following code:

my.3dplot-scatterplot3d(my.coords, pch=19, zlim=c(0,1), scale.y=0.5,
angle=30, box=FALSE)

where my.coords is a data frame that contains x, y, and z coordinates for
grid points whose elevation we sampled.

The problem occurs when I try to add points using points3d.  I tried to
follow the code in the examples of the package pdf.

First, I tried the following code to add all of the points that I wanted:

my.3dplot$points3d(seq(400,600,0.19), seq(600,400,0.295),
seq(800,500,0.24), seq(1000,1400,0.22), seq(1200,600,0.24),
seq(1200,1500,0.28), seq(1300,1400,0.205), seq(1700,500,0.26),
seq(1700,600,0.21), seq(1900,1400,0.255), seq(2300,1400,0.275),
seq(2600,1300,0.225), seq(2700,400,0.235), seq(2700,1300,0.265),
seq(3100,1000,0.135), col=blue, type=h, pch=16)

and got the following error:
Error in seq.default(600, 400, 0.295) : wrong sign in 'by' argument

So I just tried to add the first point using the following code:

my.3dplot$points3d(seq(400,600,0.19), col=blue, type=h, pch=16)

and got the following error message:

Error in xyz.coords(x, y, z) : 'x', 'y' and 'z' lengths differ.

Does anyone know how I can use this function in the scatterplot3d package?

Thanks so much!

Ryan


~~
Ryan D. Briscoe Runquist
Population Biology Graduate Group
University of California, Davis
[EMAIL PROTECTED]

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Re: [R] help with scatterplot3d

2007-08-13 Thread Duncan Murdoch
On 8/13/2007 3:03 PM, Ryan Briscoe Runquist wrote:
 Hello,
 
 I am having a bit of trouble with scatterplot3d().
 
 I was able to plot a 3d cloud of points using the following code:
 
my.3dplot-scatterplot3d(my.coords, pch=19, zlim=c(0,1), scale.y=0.5,
 angle=30, box=FALSE)
 
 where my.coords is a data frame that contains x, y, and z coordinates for
 grid points whose elevation we sampled.
 
 The problem occurs when I try to add points using points3d.  I tried to
 follow the code in the examples of the package pdf.
 
 First, I tried the following code to add all of the points that I wanted:
 
my.3dplot$points3d(seq(400,600,0.19), seq(600,400,0.295),
 seq(800,500,0.24), seq(1000,1400,0.22), seq(1200,600,0.24),
 seq(1200,1500,0.28), seq(1300,1400,0.205), seq(1700,500,0.26),
 seq(1700,600,0.21), seq(1900,1400,0.255), seq(2300,1400,0.275),
 seq(2600,1300,0.225), seq(2700,400,0.235), seq(2700,1300,0.265),
 seq(3100,1000,0.135), col=blue, type=h, pch=16)

The header to the function (which you can see by evaluating 
my.3dplot$points3d) is

function (x, y = NULL, z = NULL, type = p, ...)

so you are setting x to seq(400,600,0.19), y to seq(600,400,0.295), etc.

I think you probably want

my.3dplot$points3d(x=c(400, 600, ...),
y=c(600, 400, ...),
z=c(0.19, 0.295, ...), ...)

(where the ... is to be filled in by you.)
 
 and got the following error:
 Error in seq.default(600, 400, 0.295) : wrong sign in 'by' argument
 
 So I just tried to add the first point using the following code:
 
my.3dplot$points3d(seq(400,600,0.19), col=blue, type=h, pch=16)
 
 and got the following error message:
 
 Error in xyz.coords(x, y, z) : 'x', 'y' and 'z' lengths differ.
 
 Does anyone know how I can use this function in the scatterplot3d package?

try

my.3dplot$points3d(x=400, y=600, z=0.19, col=blue, type=h, pch=16)

Duncan Murdoch

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Re: [R] help with scatterplot3d

2007-08-13 Thread Ben Bolker
Ryan Briscoe Runquist rdbriscoe at ucdavis.edu writes:

 
 
 Hello,
 
 I am having a bit of trouble with scatterplot3d().
 
 I was able to plot a 3d cloud of points using the following code:
 
 my.3dplot-scatterplot3d(my.coords, pch=19, zlim=c(0,1), scale.y=0.5,
 angle=30, box=FALSE)
 
 where my.coords is a data frame that contains x, y, and z coordinates for
 grid points whose elevation we sampled.
 
 The problem occurs when I try to add points using points3d.  I tried to
 follow the code in the examples of the package pdf.
 
 First, I tried the following code to add all of the points that I wanted:
 
 my.3dplot$points3d(seq(400,600,0.19), seq(600,400,0.295),
 seq(800,500,0.24), seq(1000,1400,0.22), seq(1200,600,0.24),
 seq(1200,1500,0.28), seq(1300,1400,0.205), seq(1700,500,0.26),
 seq(1700,600,0.21), seq(1900,1400,0.255), seq(2300,1400,0.275),
 seq(2600,1300,0.225), seq(2700,400,0.235), seq(2700,1300,0.265),
 seq(3100,1000,0.135), col=blue, type=h, pch=16)

  I think you probably want:

xvals - c(400,600,800,1000,1200,1200,1300,1700,1700,1900,
2300,2600,2700,2700,3100)
yvals - c(600,400,500,1400,600,1500,1400,500,600,
 1400,1400,1300,400,1300,1000)
zvals - c(0.19,0.295,0.24,0.22,0.24,0.28,0.205,0.26,
   0.21,0.255,0.275,0.225,0.235,0.265,0.135)
my.3dplot$points3d(x=xvals,y=yvals,z=zvals,col=blue,type=h,pch=16)

   Look carefully at ?seq and you may understand what you've
done wrong ...

  Ben Bolker

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