Re: [R-pkg-devel] package test returns error when R version 4.1.0

2021-07-08 Thread Dirk Eddelbuettel 


On 8 July 2021 at 10:41, Uwe Ligges wrote:
| It was likely an interim version of Rcpp (which never made it to CRAN) 
| that was causing trouble.

Yup, our bad.

While we test against 2300+ reverse depends, we only test against them _under
the most recent versions we have seen_ which affects the Rcpp under test, and
we do not have an (explicit) test vector for these 2300+ packages tested
against everything built under the _CRAN_ version of Rcpp.  So the need for
one small adjustment slipped til we made it to CRAN, which caused this issue,
and one for broom.mixed (as we communicated off-list to Ben).

In short, no matter how large you try to span your test coverage and surface,
there will always be a residual chance for something slipping through.

Dirk

-- 
https://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org

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Re: [R-pkg-devel] package test returns error when R version 4.1.0

2021-07-08 Thread Alex Chubaty 
Thanks Uwe! That fixed the issue for me too.

On Thu, Jul 8, 2021 at 2:41 AM Uwe Ligges 
wrote:

> It was likely an interim version of Rcpp (which never made it to CRAN)
> that was causing trouble.
> The winbuilder queues are set up to test against most recent CRAN
> submissions which caused the trouble in this case.
>
> Best,
> Uwe Ligges
>
> On 07.07.2021 22:42, Murray Efford wrote:
> > Likewise: secr now passes on Winbuilder for R-release.
> > Thanks
> > Murray
> >
> > 
> > From: Gianmarco Alberti 
> > Sent: 08 July 2021 08:21
> > To: r-package-devel@r-project.org
> > Cc: Murray Efford; Duncan Murdoch; Alex Chubaty; Uwe Ligges
> > Subject: Re: [R-pkg-devel] package test returns error when R version
> 4.1.0
> >
> > Dear All,
> > Thanks for the useful discussion.
> >
> > After Uwe’s prompt, I have tested the package again, and everything is
> fine now.
> > Was it a CRAN issue?
> >
> > Whatever the issue was, I am glad my new version is bound to be on CRAN
> soon (I have just submitted it).
> >
> > Best
> > Gianmarco
> >
> > 
> > Dr Gianmarco Alberti (PhD Udine)
> > Lecturer in Spatial Forensics
> > Coordinator of the BA dissertations
> > Department of Criminology
> > Faculty for Social Wellbeing
> > Room 332, Humanities B (FEMA)
> > University of Malta, Msida, Malta (Europe) - MSD 2080
> > tel +356 2340 3718
> >
> > Academic profiles
> > https://www.researchgate.net/profile/Gianmarco_Alberti4<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.researchgate.net%2Fprofile%2FGianmarco_Alberti4=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130923706%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=h8Vd1hD4UYCABtO2KXooCaVJ20XkNPizQUisles3WG4%3D=0
> >
> > https://malta.academia.edu/GianmarcoAlberti<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmalta.academia.edu%2FGianmarcoAlberti=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130933658%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=zts7AUM0HDuFCDEIY8bKnZ9gtW2XNlsc%2FmGyRpldKc4%3D=0
> >
> >
> > Google Scholar profile
> > https://scholar.google.com/citations?user=tFrJKQ0J=en<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fscholar.google.com%2Fcitations%3Fuser%3DtFrJKQ0J%26hl%3Den=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130933658%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=1EFXaEOiQUnYxmyH3YXpeY7UnxJmJIlNs4J4kyYLkfs%3D=0
> >
> >
> > Correspondence Analysis website
> > http://cainarchaeology.weebly.com/<
> https://apc01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fcainarchaeology.weebly.com%2F=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130933658%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=CsvmSG6H6Hdo32dt95ylIXFJL80zBFKpwp8Jck5awns%3D=0
> >
> >
> > R packages on CRAN:
> > CAinterprTools
> > https://cran.r-project.org/web/packages/CAinterprTools/index.html<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcran.r-project.org%2Fweb%2Fpackages%2FCAinterprTools%2Findex.html=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130943618%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=LAeqHw6HR8j99IxLlt142lRP9Zr0OHvQuaRSMgE6tz4%3D=0
> >
> >
> > GmAMisc
> > https://cran.r-project.org/package=GmAMisc<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcran.r-project.org%2Fpackage%3DGmAMisc=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130943618%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=0g8Doj4UduPhPihoTd0M5i8UkHEAu526hW8bw%2FLqW2A%3D=0
> >
> >
> > movecost
> > https://cran.r-project.org/web/packages/movecost/index.html<
> https://apc01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcran.r-project.org%2Fweb%2Fpackages%2Fmovecost%2Findex.html=04%7C01%7Cmurray.efford%40otago.ac.nz%7Cc4dbf78cce0a48d0d11708d94184c644%7C0225efc578fe4928b1579ef24809e9ba%7C1%7C0%7C637612862130953573%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000=NTlgzW0PBh7RvbhNWb9ZCWsUG8Fh2NcVIqX%2Flta9%2FJ4%3D=0
> >
> > 
> > On 7 Jul 2021, 16:47 +0200, Uwe Ligges ,
> wrote:
> > Can you pls try again now.
> >
> > Best,
> >

Re: [R-pkg-devel] package test returns error when R version 4.1.0

2021-07-08 Thread Uwe Ligges 
It was likely an interim version of Rcpp (which never made it to CRAN) 
that was causing trouble.
The winbuilder queues are set up to test against most recent CRAN 
submissions which caused the trouble in this case.


Best,
Uwe Ligges

On 07.07.2021 22:42, Murray Efford wrote:

Likewise: secr now passes on Winbuilder for R-release.
Thanks
Murray


From: Gianmarco Alberti 
Sent: 08 July 2021 08:21
To: r-package-devel@r-project.org
Cc: Murray Efford; Duncan Murdoch; Alex Chubaty; Uwe Ligges
Subject: Re: [R-pkg-devel] package test returns error when R version 4.1.0

Dear All,
Thanks for the useful discussion.

After Uwe’s prompt, I have tested the package again, and everything is fine now.
Was it a CRAN issue?

Whatever the issue was, I am glad my new version is bound to be on CRAN soon (I 
have just submitted it).

Best
Gianmarco


Dr Gianmarco Alberti (PhD Udine)
Lecturer in Spatial Forensics
Coordinator of the BA dissertations
Department of Criminology
Faculty for Social Wellbeing
Room 332, Humanities B (FEMA)
University of Malta, Msida, Malta (Europe) - MSD 2080
tel +356 2340 3718

Academic profiles
https://www.researchgate.net/profile/Gianmarco_Alberti4
https://malta.academia.edu/GianmarcoAlberti

Google Scholar profile
https://scholar.google.com/citations?user=tFrJKQ0J=en

Correspondence Analysis website
http://cainarchaeology.weebly.com/

R packages on CRAN:
CAinterprTools
https://cran.r-project.org/web/packages/CAinterprTools/index.html

GmAMisc
https://cran.r-project.org/package=GmAMisc

movecost
https://cran.r-project.org/web/packages/movecost/index.html

On 7 Jul 2021, 16:47 +0200, Uwe Ligges , wrote:
Can you pls try again now.

Best,
Uwe Ligges

On 06.07.2021 23:18, Murray Efford wrote:
I also get from Winbuilder:

** byte-compile and prepare package for lazy loading
ERROR: lazy loading failed for package 'secr'

even for the tar.gz of the version secr 4.4.4 that currently passes all checks 
on CRAN. Perhaps it is significant that secr also imports from raster that had 
a new version on CRAN 18th June.