Re: [R-pkg-devel] r-hub status
Thank you Gabor! I've posted an issue. https://github.com/r-hub/rhub/issues/338 Thank you Bill! I think the solution for this may be simple. But I wanted to make sure I could reproduce the warning so that I can validate that my fix resolves the issue. And thank you Uwe for all the work you do helping package developers! Brian On Tue, Feb 4, 2020 at 9:32 AM Uwe Ligges wrote: > > > On 04.02.2020 18:21, William Dunlap wrote: > > CRAN's check gives a warning > > > > checking Rd \usage sections ... WARNING > > Documented arguments not in \usage in documentation object 'Process > chromR > > objects': > >‘...’ > > > > > > and man/proc_chromR.Rd on github does list '...' in the \arguments > section > > but no function listed in the \usage section uses '...'. > > > > The question is why you don't always get that warning. > > Because there was a bug in R that the warnings was not produced for a > long time, and this is now fixed in recent verisons of R-devel. Hence ou > only get it here. > > Best, > Uwe Ligges > > > > > Bill Dunlap > > TIBCO Software > > wdunlap tibco.com > > > > > > On Tue, Feb 4, 2020 at 8:47 AM brian knaus > wrote: > > > >> Does anyone know the current status of r-hub? My package ( > >> https://github.com/knausb/vcfR) is throwing warnings on R-devel ( > >> https://cran.r-project.org/web/checks/check_results_vcfR.html) and CRAN > >> has > >> asked me to fix it. Tried r-hub but it failed. > >> > >> > >> > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-ad6bc014056941a58d94765de3134c4e > >> > >> > >> > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-f673df2011864365ae5f7f66b4d16bf3 > >> > >> My interpretation is that this is not due to my package. Is anyone else > >> having issues with r-hub? > >> > >> Thanks! > >> Brian > >> > >> [[alternative HTML version deleted]] > >> > >> __ > >> R-package-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/r-package-devel > >> > > > > [[alternative HTML version deleted]] > > > > __ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] r-hub status
On 04.02.2020 18:21, William Dunlap wrote: CRAN's check gives a warning checking Rd \usage sections ... WARNING Documented arguments not in \usage in documentation object 'Process chromR objects': ‘...’ and man/proc_chromR.Rd on github does list '...' in the \arguments section but no function listed in the \usage section uses '...'. The question is why you don't always get that warning. Because there was a bug in R that the warnings was not produced for a long time, and this is now fixed in recent verisons of R-devel. Hence ou only get it here. Best, Uwe Ligges Bill Dunlap TIBCO Software wdunlap tibco.com On Tue, Feb 4, 2020 at 8:47 AM brian knaus wrote: Does anyone know the current status of r-hub? My package ( https://github.com/knausb/vcfR) is throwing warnings on R-devel ( https://cran.r-project.org/web/checks/check_results_vcfR.html) and CRAN has asked me to fix it. Tried r-hub but it failed. https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-ad6bc014056941a58d94765de3134c4e https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-f673df2011864365ae5f7f66b4d16bf3 My interpretation is that this is not due to my package. Is anyone else having issues with r-hub? Thanks! Brian [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] r-hub status
CRAN's check gives a warning checking Rd \usage sections ... WARNING Documented arguments not in \usage in documentation object 'Process chromR objects': ‘...’ and man/proc_chromR.Rd on github does list '...' in the \arguments section but no function listed in the \usage section uses '...'. The question is why you don't always get that warning. Bill Dunlap TIBCO Software wdunlap tibco.com On Tue, Feb 4, 2020 at 8:47 AM brian knaus wrote: > Does anyone know the current status of r-hub? My package ( > https://github.com/knausb/vcfR) is throwing warnings on R-devel ( > https://cran.r-project.org/web/checks/check_results_vcfR.html) and CRAN > has > asked me to fix it. Tried r-hub but it failed. > > > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-ad6bc014056941a58d94765de3134c4e > > > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-f673df2011864365ae5f7f66b4d16bf3 > > My interpretation is that this is not due to my package. Is anyone else > having issues with r-hub? > > Thanks! > Brian > > [[alternative HTML version deleted]] > > __ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel > [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] r-hub status
This is the R-hub issue tracker: https://github.com/r-hub/rhub/issues Gabor On Tue, Feb 4, 2020 at 4:47 PM brian knaus wrote: > > Does anyone know the current status of r-hub? My package ( > https://github.com/knausb/vcfR) is throwing warnings on R-devel ( > https://cran.r-project.org/web/checks/check_results_vcfR.html) and CRAN has > asked me to fix it. Tried r-hub but it failed. > > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-ad6bc014056941a58d94765de3134c4e > > https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-f673df2011864365ae5f7f66b4d16bf3 > > My interpretation is that this is not due to my package. Is anyone else > having issues with r-hub? > > Thanks! > Brian > > [[alternative HTML version deleted]] > > __ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
[R-pkg-devel] r-hub status
Does anyone know the current status of r-hub? My package ( https://github.com/knausb/vcfR) is throwing warnings on R-devel ( https://cran.r-project.org/web/checks/check_results_vcfR.html) and CRAN has asked me to fix it. Tried r-hub but it failed. https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-ad6bc014056941a58d94765de3134c4e https://builder.r-hub.io/status/vcfR_1.9.0.9000.tar.gz-f673df2011864365ae5f7f66b4d16bf3 My interpretation is that this is not due to my package. Is anyone else having issues with r-hub? Thanks! Brian [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
