Re: [R-sig-Fedora] Cannot install knitr
On Thu, Jun 29, 2017 at 3:15 PM, Tom Callaway wrote:
>> Dear All,
>>
>> I am trying to install the package
>>
>> knitr
>>
>> but getting the following error:
>>
>> --
>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>> unable to load shared object
>> '/usr/lib64/R/library/stringi/libs/stringi.so':
>> libicui18n.so.56: cannot open shared object file: No such file or directory
>> Error : unable to load R code in package ‘knitr’
>> ERROR: lazy loading failed for package ‘knitr’
>> * removing ‘/usr/lib64/R/library/knitr’
>> * restoring previous ‘/usr/lib64/R/library/knitr’
>> --
>>
>> I suppose that the problem is that knitr expects
>>
>> libicu-56
>>
>> installed, but it is
>>
>> libicu-57
>>
>> that is installed.
>
> Close, but this isn't knitr complaining.
> /usr/lib64/R/library/stringi/libs/stringi.so comes from the "stringi"
> CRAN module:
>
> https://cran.r-project.org/package=stringi
>
> You might have installed that from source, before updating libicu? You
> might not have done this manually, it could have been pulled in as a
> dependency of something else. "stringi" does not come with the core R
> software, so it wasn't built wrong for Fedora/EPEL. :)
>
> To reinstall it, just invoke (again):
>
> install.packages("stringi")
>
> That should succeed, and then the "stringi" shared object should be able
> to load.
Thanks, Tom. That did the trick!
Paul
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Re: [R-sig-Fedora] Cannot install knitr
On 06/29/2017 06:04 AM, Paul Smith wrote:
> Dear All,
>
> I am trying to install the package
>
> knitr
>
> but getting the following error:
>
> --
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
> unable to load shared object '/usr/lib64/R/library/stringi/libs/stringi.so':
> libicui18n.so.56: cannot open shared object file: No such file or directory
> Error : unable to load R code in package ‘knitr’
> ERROR: lazy loading failed for package ‘knitr’
> * removing ‘/usr/lib64/R/library/knitr’
> * restoring previous ‘/usr/lib64/R/library/knitr’
> --
>
> I suppose that the problem is that knitr expects
>
> libicu-56
>
> installed, but it is
>
> libicu-57
>
> that is installed.
Close, but this isn't knitr complaining.
/usr/lib64/R/library/stringi/libs/stringi.so comes from the "stringi"
CRAN module:
https://cran.r-project.org/package=stringi
You might have installed that from source, before updating libicu? You
might not have done this manually, it could have been pulled in as a
dependency of something else. "stringi" does not come with the core R
software, so it wasn't built wrong for Fedora/EPEL. :)
To reinstall it, just invoke (again):
install.packages("stringi")
That should succeed, and then the "stringi" shared object should be able
to load.
~tom
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[R-sig-Fedora] Cannot install knitr
Dear All, I am trying to install the package knitr but getting the following error: -- Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib64/R/library/stringi/libs/stringi.so': libicui18n.so.56: cannot open shared object file: No such file or directory Error : unable to load R code in package ‘knitr’ ERROR: lazy loading failed for package ‘knitr’ * removing ‘/usr/lib64/R/library/knitr’ * restoring previous ‘/usr/lib64/R/library/knitr’ -- I suppose that the problem is that knitr expects libicu-56 installed, but it is libicu-57 that is installed. Any help? Thanks in advance, Paul ___ R-SIG-Fedora mailing list R-SIG-Fedora@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-fedora
