Re: [R-sig-Geo] Wavelet analysis of anisotropy in point patterns
Hi Domenico, AFAIK, you should build your own functions to get the same analysis provided by the PASSaGE software. If you have some elementary R programming skills, following the description of the analysis proposed by Rosenberg(2004) shouldn't be much complicated. Otherwise...I don't know. Good luck! Marcelino El 19/07/2017 a las 12:12, Domenico Giusti escribió: Thank you Marcelino, I already had a look at those functions and, although they do the job, I was wondering how to analyze anisotropy in point pattern using wavelet analysis. I tried to use the WaveletComp package, but with no success. It looks to me that packages for wavelet analysis work fine with temporal data, but I couldn't find the way to use it with spatial point patterns. How could I get in R the same analysis provided by the PASSaGE software? Thank you! On 07/18/2017 06:17 PM, Marcelino de la Cruz Rot wrote: Hi Domenico, In spatstat you have several functions to detect anysotropy in point patterns: - the sector K-function, Ksector(); - the pair orientation distribution, pairorient(); - the anisotropic pair correlation function, Kmeasure(). See the help pages of these functios or, even better, consult pages 236:242 in Adrian Baddeley, Ege Rubak, Rolf Turner (2015). Spatial Point Patterns: Methodology and Applications with R. London: Chapman and Hall/CRC Press, 2015. http://www.crcpress.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/ Cheers, Marcelino El 18/07/2017 a las 16:30, Domenico Giusti escribió: Hi all, I'm running wavelet analysis of anisotropy in point patterns using the PASSaGE software by Rosenberg et al. Rosenberg, M.S., and C.D. Anderson (2011) PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2. Methods in Ecology & Evolution 2(3):229-232. http://www.passagesoftware.net Rosenberg, M.S. 2004. Wavelet analysis for detecting anisotropy in point patterns. Journal of Vegetation Science 15:277-284. DOI: 10./j.1654-1103.2004.tb02262.x I wonder how I can do the same analysis using R. Thanks, Dome ___ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo -- Marcelino de la Cruz Rot Depto. de Biología y Geología Física y Química Inorgánica Universidad Rey Juan Carlos Móstoles España ___ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo
Re: [R-sig-Geo] Wavelet analysis of anisotropy in point patterns
Thank you Marcelino, I already had a look at those functions and, although they do the job, I was wondering how to analyze anisotropy in point pattern using wavelet analysis. I tried to use the WaveletComp package, but with no success. It looks to me that packages for wavelet analysis work fine with temporal data, but I couldn't find the way to use it with spatial point patterns. How could I get in R the same analysis provided by the PASSaGE software? Thank you! On 07/18/2017 06:17 PM, Marcelino de la Cruz Rot wrote: Hi Domenico, In spatstat you have several functions to detect anysotropy in point patterns: - the sector K-function, Ksector(); - the pair orientation distribution, pairorient(); - the anisotropic pair correlation function, Kmeasure(). See the help pages of these functios or, even better, consult pages 236:242 in Adrian Baddeley, Ege Rubak, Rolf Turner (2015). Spatial Point Patterns: Methodology and Applications with R. London: Chapman and Hall/CRC Press, 2015. http://www.crcpress.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/ Cheers, Marcelino El 18/07/2017 a las 16:30, Domenico Giusti escribió: Hi all, I'm running wavelet analysis of anisotropy in point patterns using the PASSaGE software by Rosenberg et al. Rosenberg, M.S., and C.D. Anderson (2011) PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2. Methods in Ecology & Evolution 2(3):229-232. http://www.passagesoftware.net Rosenberg, M.S. 2004. Wavelet analysis for detecting anisotropy in point patterns. Journal of Vegetation Science 15:277-284. DOI: 10./j.1654-1103.2004.tb02262.x I wonder how I can do the same analysis using R. Thanks, Dome ___ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo
Re: [R-sig-Geo] Wavelet analysis of anisotropy in point patterns
Hi Domenico, In spatstat you have several functions to detect anysotropy in point patterns: - the sector K-function, Ksector(); - the pair orientation distribution, pairorient(); - the anisotropic pair correlation function, Kmeasure(). See the help pages of these functios or, even better, consult pages 236:242 in Adrian Baddeley, Ege Rubak, Rolf Turner (2015). Spatial Point Patterns: Methodology and Applications with R. London: Chapman and Hall/CRC Press, 2015. http://www.crcpress.com/Spatial-Point-Patterns-Methodology-and-Applications-with-R/Baddeley-Rubak-Turner/9781482210200/ Cheers, Marcelino El 18/07/2017 a las 16:30, Domenico Giusti escribió: Hi all, I'm running wavelet analysis of anisotropy in point patterns using the PASSaGE software by Rosenberg et al. Rosenberg, M.S., and C.D. Anderson (2011) PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2. Methods in Ecology & Evolution 2(3):229-232. http://www.passagesoftware.net Rosenberg, M.S. 2004. Wavelet analysis for detecting anisotropy in point patterns. Journal of Vegetation Science 15:277-284. DOI: 10./j.1654-1103.2004.tb02262.x I wonder how I can do the same analysis using R. Thanks, Dome -- Marcelino de la Cruz Rot Depto. de Biología y Geología Física y Química Inorgánica Universidad Rey Juan Carlos Móstoles España ___ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo
[R-sig-Geo] Wavelet analysis of anisotropy in point patterns
Hi all, I'm running wavelet analysis of anisotropy in point patterns using the PASSaGE software by Rosenberg et al. Rosenberg, M.S., and C.D. Anderson (2011) PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2. Methods in Ecology & Evolution 2(3):229-232. http://www.passagesoftware.net Rosenberg, M.S. 2004. Wavelet analysis for detecting anisotropy in point patterns. Journal of Vegetation Science 15:277-284. DOI: 10./j.1654-1103.2004.tb02262.x I wonder how I can do the same analysis using R. Thanks, Dome -- Domenico GiustiGPG keyID: 2048R/A3AB7054F6E5D778 ___ R-sig-Geo mailing list R-sig-Geo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-geo