Re: [R-SIG-Mac] Yosemite and R

2014-10-20 Thread Ben Clark
Simon Urbanek simon.urbanek at r-project.org writes:

 
 On Oct 17, 2014, at 5:01 PM, Gregory Sawyer gdsawyer at 
greatergood.com wrote:
 
  
  On Oct 17, 2014, at 1:49 PM, Marc Schwartz marc_schwartz at 
me.com wrote:
  
  
  On Oct 17, 2014, at 2:17 PM, Spencer Mass masss at 
newpaltz.edu wrote:
  
  Has anyone had issues installing/running  R3.1.1 2014-07-11, R.app 
1.65 on Yosemite?
  
  Thanks,
  
  - SM
  
  
  I upgraded (over Mavericks) to Yosemite last night. R was already 
installed and I have had no issues at
 this point.
  
  I don't normally use R.app and use Emacs with ESS, however, R.app 
appears to be running without issue with
 the limited use that I attempted.
  
  Regards,
  
  Marc Schwartz
  
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  I upgraded to 10.10 Yosemite this morning; R.app seems to be having 
some problems launching, but not all
 the time.  It's crashed twice on startup, but the second attempt (e.g. 
clicking 'Re-open' on the crash
 stack trace panel) seems to work.(running a very recent 27-inch iMac 
w/ 32Gib core, a 1tb drive, and a
 second 27-inch Apple LED cinema display, and I suspect it might be that 
second display that's causing the
 problems, but that's just speculation right now.)
 
 If you have a crash, please send me the crash report. If in doubt, check 
your preferences and startup files.
 
 I have been running Yosemite for quite a while and didn't see any issues 
so far. Given how little changed in
 Yosemite I don't expect any changes to the Mavericks build at this point 
(i.e. Mavericks will remain the
 base target for all recent OS X builds).
 
 Cheers,
 Simon
 

I've been having issues getting the 'tcltk' package to run. I had this with 
Mavericks at first as well, but once X11 got updated the issue went away. 
But alas for now X11 is up to date and a number of other other packages 
that require the tcltk won't work. Good fun.
-Ben

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Re: [R-SIG-Mac] Yosemite and R

2014-10-20 Thread Hadley Wickham

 I have been running Yosemite for quite a while and didn't see any issues so 
 far. Given how little changed in Yosemite I don't expect any changes to the 
 Mavericks build at this point (i.e. Mavericks will remain the base target for 
 all recent OS X builds).

At RStudio, we've seen one problem - the PATH is not passed along to
sub-processes, e.g. these two functions return different values:

Sys.getenv(PATH)
system(echo $PATH)

This breaks Sys.which().

Hadley

-- 
http://had.co.nz/

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Re: [R-SIG-Mac] Yosemite and R

2014-10-20 Thread peter dalgaard

 On 20 Oct 2014, at 14:50 , Ben Clark b.y.cl...@csuohio.edu wrote:
 
 Simon Urbanek simon.urbanek at r-project.org writes:
 
 
 On Oct 17, 2014, at 5:01 PM, Gregory Sawyer gdsawyer at 
 greatergood.com wrote:
 
 
 On Oct 17, 2014, at 1:49 PM, Marc Schwartz marc_schwartz at 
 me.com wrote:
 
 
 On Oct 17, 2014, at 2:17 PM, Spencer Mass masss at 
 newpaltz.edu wrote:
 
 Has anyone had issues installing/running  R3.1.1 2014-07-11, R.app 
 1.65 on Yosemite?
 
 Thanks,
 
 - SM
 
 
 I upgraded (over Mavericks) to Yosemite last night. R was already 
 installed and I have had no issues at
 this point.
 
 I don't normally use R.app and use Emacs with ESS, however, R.app 
 appears to be running without issue with
 the limited use that I attempted.
 
 Regards,
 
 Marc Schwartz
 
 ___
 R-SIG-Mac mailing list
 R-SIG-Mac at r-project.org
 https://stat.ethz.ch/mailman/listinfo/r-sig-mac
 
 I upgraded to 10.10 Yosemite this morning; R.app seems to be having 
 some problems launching, but not all
 the time.  It's crashed twice on startup, but the second attempt (e.g. 
 clicking 'Re-open' on the crash
 stack trace panel) seems to work.(running a very recent 27-inch iMac 
 w/ 32Gib core, a 1tb drive, and a
 second 27-inch Apple LED cinema display, and I suspect it might be that 
 second display that's causing the
 problems, but that's just speculation right now.)
 
 If you have a crash, please send me the crash report. If in doubt, check 
 your preferences and startup files.
 
 I have been running Yosemite for quite a while and didn't see any issues 
 so far. Given how little changed in
 Yosemite I don't expect any changes to the Mavericks build at this point 
 (i.e. Mavericks will remain the
 base target for all recent OS X builds).
 
 Cheers,
 Simon
 
 
 I've been having issues getting the 'tcltk' package to run. I had this with 
 Mavericks at first as well, but once X11 got updated the issue went away. 
 But alas for now X11 is up to date and a number of other other packages 
 that require the tcltk won't work. Good fun.
 -Ben
 

Yes, things don't seem quite well for me either. With a locally compiled R, I 
can get three of the four demos to run, but tkdensity dies with a floating 
point error. With 3.0.2-snowleopard build, all demos work on the command line, 
but R.app hangs on tkdensity.

-pd

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-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Email: pd@cbs.dk  Priv: pda...@gmail.com

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Re: [R-SIG-Mac] Yosemite and R

2014-10-20 Thread David Winsemius

On Oct 20, 2014, at 8:21 AM, Hadley Wickham wrote:

 
 I have been running Yosemite for quite a while and didn't see any issues so 
 far. Given how little changed in Yosemite I don't expect any changes to the 
 Mavericks build at this point (i.e. Mavericks will remain the base target 
 for all recent OS X builds).
 
 At RStudio, we've seen one problem - the PATH is not passed along to
 sub-processes, e.g. these two functions return different values:
 
 Sys.getenv(PATH)
 system(echo $PATH)

I seem to remember discussions on R-SIG-Mac that system(echo $PATH) gets 
passed to the bash environment which is not the same as the R environment. It 
is expected that the $PATH variable is different in the two environments.

From terminal window in Mac 10.7.5 (Lion):

david-winsemiuss-mac-pro:~ davidwinsemius$ /usr/bin/which which
/sw/bin/which

From R (Snow Leopard) on a MacPro:

 Sys.which(which)
  which 
/sw/bin/which 


On a laptop running 3.1.1 in Yosemite with the Mavericks build I get instead:

Sys.which(which)
usr/bin/which

And from the terminal I see 

/sw/bin/which

 
 This breaks Sys.which().

Not sure what breaks means. I'm not getting an error, and I wasn't 
necessarily expecting the same result
 
 Hadley
 

-- 
David Winsemius
Alameda, CA, USA

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