Re: [R-SIG-Mac] RcppArmadillo errors

2016-09-01 Thread David Winsemius 

> On Sep 1, 2016, at 11:58 AM, David Winsemius  wrote:
> 
> 
>> On Aug 27, 2016, at 5:35 AM, Oskar Knapik  wrote:
>> 
>> Dear all
>> 
>> I am having some problems with your package.
>> 
>> It looks that I can't load it on my Mac computer (OS X El Capitan 10.11.6)
>> 
>> I got the following errors:
>> Error in dyn.load(file, DLLpath = DLLpath, ...) : 
>> can't load shared object
>> '/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so':
>> dlopen(/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so,
>>  6): Library not loaded: 
>> /Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libRlapack.dylib
>> Referenced from: 
>> /Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so
>> Reason: image not found
>> 
>> The newest OS X doesn't support X11 (I am not sure if you use it)
> 
> XQuartz is the X11 for the Mac:
> 
> https://www.xquartz.org/
> 
> This error can be found on SO and I think the second answer (to just (re-?) 
> install XQuartz) is the correct one.
> 
> http://stackoverflow.com/questions/26489928/cant-load-x11-in-r-after-os-x-yosemite-upgrade
> 
> -- 
> David.
>> 
>> I am also trying to install the package on Microsoft R
>> https://mran.microsoft.com 
>> 
>> 
>> Below the errors from the installation:
>> 
>> install.packages("RcppArmadillo", verbose=T)
>> Installing package into ‘/Users/oknapik/Library/R/3.3/library’
>> (as ‘lib’ is unspecified)
>> system (cmd0): /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL
>> trying URL 
>> 'https://mran.revolutionanalytics.com/snapshot/2016-07-01/src/contrib/RcppArmadillo_0.7.100.3.1.tar.gz
>>  
>> '
>> Content type 'application/octet-stream' length 1055712 bytes (1.0 MB)
>> ==
>> downloaded 1.0 MB
>> 
>> foundpkgs: RcppArmadillo, 
>> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
>> files: 
>> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
>> Warning
>> In command 'doTryCatch(return(expr), name, parentenv, handler)':
>> can't load the shared object  
>> '/Library/Frameworks/R.framework/Resources/modules//R_X11.so':

snipped

>> ld: warning: directory not found for option 
>> '-L/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/lib'
>> ld: warning: directory not found for option 
>> '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64'
>> ld: warning: directory not found for option '-L/usr/local/lib/x86_64'
>> ld: warning: directory not found for option 
>> '-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3'
>> ld: library not found for -lgfortran
>> clang: error: linker command failed with exit code 1 (use -v to see 
>> invocation)

Apologies for the noise. 

The XQuartz concern wasn't the actual error. I didn't read down far enough. 
Appears you do have an earlier version of RcppArmadillo although it's not clear 
which one it might be. I was able to install both a binary 
(RcppArmadillo_0.7.400.2.0.tgz) and from source: 
https://cran.cnr.berkeley.edu/src/contrib/RcppArmadillo_0.7.400.2.0.tar.gz  
without difficulty. (No warnings.)  That appears to be the current version that 
would install from CRAN and it's also the one I see at MRAN: 
https://mran.microsoft.com/src/contrib/RcppArmadillo_0.7.400.2.0.tar.gz

You are installing a somewhat older version. Using https://mran.microsoft.com 
made me wonder if you may have an earlier version of R distributed by 
Microsoft, although your directory naming suggests they have now "caught up". 
The "standard" version of Fortran for the Mac is at 
http://r.research.att.com/tools/   The MRAN distribution is not entirely 
standar. I have not heard of discrepancies with Fortran dependencies in the 
past.

-- David


>> make: *** [RcppArmadillo.so] Error 1
>> ERROR: compilation failed for package ‘RcppArmadillo’
>> * removing ‘/Users/oknapik/Library/R/3.3/library/RcppArmadillo’
>> * restoring previous ‘/Users/oknapik/Library/R/3.3/library/RcppArmadillo’
>> Warning in install.packages :
>> installation of package ‘RcppArmadillo’ had non-zero exit status
>> 
>> 
>> 
>> I would be very grateful for help.
>> 
>> Best,
>> Oskar
>>  [[alternative HTML version deleted]]
>> 
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> 
> David Winsemius
> Alameda, CA, USA
> 
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David Winsemius
Alameda, CA, USA

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Re: [R-SIG-Mac] RcppArmadillo errors

2016-09-01 Thread Michael Weylandt 


> On Aug 27, 2016, at 7:35 AM, Oskar Knapik  wrote:
> 
> Dear all
> 
> I am having some problems with your package.
> 
> It looks that I can't load it on my Mac computer (OS X El Capitan 10.11.6)
> 
> I got the following errors:
> Error in dyn.load(file, DLLpath = DLLpath, ...) : 
> can't load shared object
> '/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so':
>  
> dlopen(/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so,
>  6): Library not loaded: 
> /Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libRlapack.dylib
>  Referenced from: 
> /Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so
>  Reason: image not found
> 
> The newest OS X doesn't support X11 (I am not sure if you use it)
> 
> I am also trying to install the package on Microsoft R
> https://mran.microsoft.com 
> 
> 
> Below the errors from the installation:
> 
> install.packages("RcppArmadillo", verbose=T)
> Installing package into ‘/Users/oknapik/Library/R/3.3/library’
> (as ‘lib’ is unspecified)
> system (cmd0): /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL
> trying URL 
> 'https://mran.revolutionanalytics.com/snapshot/2016-07-01/src/contrib/RcppArmadillo_0.7.100.3.1.tar.gz
>  
> '
> Content type 'application/octet-stream' length 1055712 bytes (1.0 MB)
> ==
> downloaded 1.0 MB
> 
> foundpkgs: RcppArmadillo, 
> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
> files: 
> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
> Warning
> In command 'doTryCatch(return(expr), name, parentenv, handler)':
>  can't load the shared object  
> '/Library/Frameworks/R.framework/Resources/modules//R_X11.so':
>  dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): 
> Symbol not found: _CGBitmapContextCreate
>  Referenced from: /Library/Frameworks/R.framework/Resources/modules//R_X11.so
>  Expected in: flat namespace
> in /Library/Frameworks/R.framework/Resources/modules//R_X11.so
> * installing *source* package ‘RcppArmadillo’ ...
> ** package ‘RcppArmadillo’ has been sucessuflly unpacked and  MD5 soms were 
> checked
> checking whether the C++ compiler works... yes
> checking for C++ compiler default output file name... a.out
> checking for suffix of executables... 
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C++ compiler... yes
> checking whether clang++ accepts -g... yes
> checking how to run the C++ preprocessor... clang++ -E
> checking whether we are using the GNU C++ compiler... (cached) yes
> checking whether clang++ accepts -g... (cached) yes
> checking whether g++ version is sufficient... checking LAPACK_LIBS... system 
> LAPACK found
> configure: creating ./config.status
> config.status: creating inst/include/RcppArmadilloLapack.h
> ** libs
> clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include 
> -fPIC  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
> RcppArmadillo.cpp -o RcppArmadillo.o
> clang: warning: -framework CoreFoundation: 'linker' input unused
> clang: warning: -framework CoreGraphics: 'linker' input unused
> clang: warning: -framework CoreText: 'linker' input unused
> clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include 
> -fPIC  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
> RcppExports.cpp -o RcppExports.o
> clang: warning: -framework CoreFoundation: 'linker' input unused
> clang: warning: -framework CoreGraphics: 'linker' input unused
> clang: warning: -framework CoreText: 'linker' input unused
> clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"

Re: [R-SIG-Mac] RcppArmadillo errors

2016-09-01 Thread David Winsemius 

> On Aug 27, 2016, at 5:35 AM, Oskar Knapik  wrote:
> 
> Dear all
> 
> I am having some problems with your package.
> 
> It looks that I can't load it on my Mac computer (OS X El Capitan 10.11.6)
> 
> I got the following errors:
> Error in dyn.load(file, DLLpath = DLLpath, ...) : 
> can't load shared object
> '/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so':
>  
> dlopen(/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so,
>  6): Library not loaded: 
> /Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libRlapack.dylib
>  Referenced from: 
> /Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so
>  Reason: image not found
> 
> The newest OS X doesn't support X11 (I am not sure if you use it)

XQuartz is the X11 for the Mac:

https://www.xquartz.org/

This error can be found on SO and I think the second answer (to just (re-?) 
install XQuartz) is the correct one.

http://stackoverflow.com/questions/26489928/cant-load-x11-in-r-after-os-x-yosemite-upgrade

-- 
David.
> 
> I am also trying to install the package on Microsoft R
> https://mran.microsoft.com 
> 
> 
> Below the errors from the installation:
> 
> install.packages("RcppArmadillo", verbose=T)
> Installing package into ‘/Users/oknapik/Library/R/3.3/library’
> (as ‘lib’ is unspecified)
> system (cmd0): /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL
> trying URL 
> 'https://mran.revolutionanalytics.com/snapshot/2016-07-01/src/contrib/RcppArmadillo_0.7.100.3.1.tar.gz
>  
> '
> Content type 'application/octet-stream' length 1055712 bytes (1.0 MB)
> ==
> downloaded 1.0 MB
> 
> foundpkgs: RcppArmadillo, 
> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
> files: 
> /var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
> Warning
> In command 'doTryCatch(return(expr), name, parentenv, handler)':
>  can't load the shared object  
> '/Library/Frameworks/R.framework/Resources/modules//R_X11.so':
>  dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): 
> Symbol not found: _CGBitmapContextCreate
>  Referenced from: /Library/Frameworks/R.framework/Resources/modules//R_X11.so
>  Expected in: flat namespace
> in /Library/Frameworks/R.framework/Resources/modules//R_X11.so
> * installing *source* package ‘RcppArmadillo’ ...
> ** package ‘RcppArmadillo’ has been sucessuflly unpacked and  MD5 soms were 
> checked
> checking whether the C++ compiler works... yes
> checking for C++ compiler default output file name... a.out
> checking for suffix of executables... 
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C++ compiler... yes
> checking whether clang++ accepts -g... yes
> checking how to run the C++ preprocessor... clang++ -E
> checking whether we are using the GNU C++ compiler... (cached) yes
> checking whether clang++ accepts -g... (cached) yes
> checking whether g++ version is sufficient... checking LAPACK_LIBS... system 
> LAPACK found
> configure: creating ./config.status
> config.status: creating inst/include/RcppArmadilloLapack.h
> ** libs
> clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include 
> -fPIC  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
> RcppArmadillo.cpp -o RcppArmadillo.o
> clang: warning: -framework CoreFoundation: 'linker' input unused
> clang: warning: -framework CoreGraphics: 'linker' input unused
> clang: warning: -framework CoreText: 'linker' input unused
> clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include 
> -fPIC  
> -I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
> -DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
> -framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
> RcppExports.cpp -o RcppExports.o
> clang: warning: -framework CoreFoundation: 'linker' input unused
> clang: warning: -framework CoreGraphics: 'linker' input unused
> clang: warning: -framework CoreText: 'linker' input unused
>

[R-SIG-Mac] RcppArmadillo errors

2016-09-01 Thread Oskar Knapik 
Dear all

I am having some problems with your package.

It looks that I can't load it on my Mac computer (OS X El Capitan 10.11.6)

I got the following errors:
Error in dyn.load(file, DLLpath = DLLpath, ...) : 
 can't load shared object
'/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so':
  
dlopen(/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so,
 6): Library not loaded: 
/Library/Frameworks/R.framework/Versions/3.3/Resources/lib/libRlapack.dylib
  Referenced from: 
/Users/oknapik/Library/R/3.3/library/RcppArmadillo/libs/RcppArmadillo.so
  Reason: image not found

The newest OS X doesn't support X11 (I am not sure if you use it)

I am also trying to install the package on Microsoft R
https://mran.microsoft.com 


Below the errors from the installation:

install.packages("RcppArmadillo", verbose=T)
Installing package into ‘/Users/oknapik/Library/R/3.3/library’
(as ‘lib’ is unspecified)
system (cmd0): /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL
trying URL 
'https://mran.revolutionanalytics.com/snapshot/2016-07-01/src/contrib/RcppArmadillo_0.7.100.3.1.tar.gz
 
'
Content type 'application/octet-stream' length 1055712 bytes (1.0 MB)
==
downloaded 1.0 MB

foundpkgs: RcppArmadillo, 
/var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
files: 
/var/folders/mr/_t437jvd5v5fty4z3pypn_ycgn/T//RtmpPj3WB7/downloaded_packages/RcppArmadillo_0.7.100.3.1.tar.gz
Warning
In command 'doTryCatch(return(expr), name, parentenv, handler)':
  can't load the shared object  
'/Library/Frameworks/R.framework/Resources/modules//R_X11.so':
  dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): 
Symbol not found: _CGBitmapContextCreate
  Referenced from: /Library/Frameworks/R.framework/Resources/modules//R_X11.so
  Expected in: flat namespace
 in /Library/Frameworks/R.framework/Resources/modules//R_X11.so
* installing *source* package ‘RcppArmadillo’ ...
** package ‘RcppArmadillo’ has been sucessuflly unpacked and  MD5 soms were 
checked
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking how to run the C++ preprocessor... clang++ -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether clang++ accepts -g... (cached) yes
checking whether g++ version is sufficient... checking LAPACK_LIBS... system 
LAPACK found
configure: creating ./config.status
config.status: creating inst/include/RcppArmadilloLapack.h
** libs
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include -fPIC  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
RcppArmadillo.cpp -o RcppArmadillo.o
clang: warning: -framework CoreFoundation: 'linker' input unused
clang: warning: -framework CoreGraphics: 'linker' input unused
clang: warning: -framework CoreText: 'linker' input unused
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include -fPIC  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
RcppExports.cpp -o RcppExports.o
clang: warning: -framework CoreFoundation: 'linker' input unused
clang: warning: -framework CoreGraphics: 'linker' input unused
clang: warning: -framework CoreText: 'linker' input unused
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATION -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-I"/Users/oknapik/Library/R/3.3/library/Rcpp/include"  -I../inst/include -fPIC  
-I/private/var/root/jenkins/workspace/External-R-3.3.1/vendor/build/include 
-DU_STATIC_IMPLEMENTATIN -Wall -mtune=core2 -g -O2 -I/opt/X11/include 
-framework CoreFoundation -framework CoreGraphics -framework CoreText  -c 
fastLm.cpp

Re: [R-SIG-Mac] Problems with R CMD config

2016-09-01 Thread Ken Beath 

> On 1 Sep 2016, at 5:46 PM, Prof Brian Ripley  wrote:
> 
> On 01/09/2016 00:43, Ken Beath wrote:
>> I’m trying to use STAN which uses R CMD config to check the availability of 
>> the compilers.
>> 
>> This works fine on my MacBook but on my iMac I have the documents on a 
>> separate hard drive. Within R CMD config it uses the location of the home  
>> folder which because of my choice of name of hard drive has a space in it, 
>> and that causes problems with the batch file. In the following the volume 
>> should be Ken Main.
>> 
>> Kens-iMac:~ kjbeath1$ R CMD config CXX
>> make: /Volumes/Ken: No such file or directory
>> make: *** No rule to make target `/Volumes/Ken'.  Stop.
>> 
>> For those who are wondering why I don’t just change the name, this produces 
>> problems with other software.
>> 
>> Any ideas on a solution?
> 
> Edit the script config.
> 
> We have nothing to reproduce here (what is your home directory?), but I am 
> guessing that in
> 
>elif test -f "${HOME}/.R/Makevars-${R_PLATFORM}"; then
>  makefiles="${makefiles} -f ${HOME}/.R/Makevars-${R_PLATFORM}"
>elif test -f "${HOME}/.R/Makevars"; then
>  makefiles="${makefiles} -f ${HOME}/.R/Makevars"
> 
> you need \"${HOME}\" twice.
> 

Yes, works perfectly.

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Re: [R-SIG-Mac] Problems with R CMD config

2016-09-01 Thread Prof Brian Ripley 

On 01/09/2016 00:43, Ken Beath wrote:

I’m trying to use STAN which uses R CMD config to check the availability of the 
compilers.

This works fine on my MacBook but on my iMac I have the documents on a separate 
hard drive. Within R CMD config it uses the location of the home  folder which 
because of my choice of name of hard drive has a space in it, and that causes 
problems with the batch file. In the following the volume should be Ken Main.

Kens-iMac:~ kjbeath1$ R CMD config CXX
make: /Volumes/Ken: No such file or directory
make: *** No rule to make target `/Volumes/Ken'.  Stop.

For those who are wondering why I don’t just change the name, this produces 
problems with other software.

Any ideas on a solution?


Edit the script config.

We have nothing to reproduce here (what is your home directory?), but I 
am guessing that in


elif test -f "${HOME}/.R/Makevars-${R_PLATFORM}"; then
  makefiles="${makefiles} -f ${HOME}/.R/Makevars-${R_PLATFORM}"
elif test -f "${HOME}/.R/Makevars"; then
  makefiles="${makefiles} -f ${HOME}/.R/Makevars"

you need \"${HOME}\" twice.

Or set R_MAKEVARS_USER to a path without spaces.


--
Brian D. Ripley,  rip...@stats.ox.ac.uk
Emeritus Professor of Applied Statistics, University of Oxford

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