That looks like a package issue, so I would contact the author. Some authors
can be very helpful.
Ken
> On 2 Sep 2019, at 12:05 pm, Timothy Dickinson
> wrote:
>
> I have repeatedly been encountering a problem reading into R nexus files that
> I created in PAUP* 4.0a. I use the savetrees command in PAUP in order to get
> rid of edge lengths in .tre files received from my collaborator. This is
> useful to me since I thought I could edit things like tree and tip labels in
> the nexus file. But even without modifying the file exported by PAUP, I
> encounter this error message when I try to read the file into R (3.6.0
> running on a Mac under OS 10.12.6). The Translate block has 26 labels, for
> the 26 taxa.
>
>> read.nexus("CDS_loci.treefile244.nex")
> 244 phylogenetic trees
> Warning message:
> In matrix(x, ncol = 2, byrow = TRUE) :
> data length [51] is not a sub-multiple or multiple of the number of rows [26]
>>
>
> Any suggestions as to what the problem might be would be most welcome.
>
> Thank you, ---tad.
>
>
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