Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
On the following cfg: Intel macmini 2018 macos 14.3.1 R 4.1.2 XQuartz 2.8.5 RStudio 2023.03.0+386 Running the example from the "abline" command in R (cmd line) and RStudio, I get the same results that María-Ángeles and Michael G. described (i.e., no plots via R and plots via RStudiio). When I switched back to an older version of XQuartz (2.7.11) the plots worked well. cheers, roy On Fri, Feb 16, 2024 at 5:11 AM Michael Grundler wrote: > I am also observing the same behavior as María with the 4.3.2 Patched > binary from mac.r-project.org running under Sonoma 14.3.1 on an m3 > mac. Using the default quartz() device and running the example line by > line shows a blank device. If the device window is resized, however, > the expected result appears. The example runs fine using x11(). The > example also runs fine on both quartz() and x11() on my old x86 > running under Sonoma 14.2.1. > > > sessionInfo() > R version 4.3.2 Patched (2024-02-13 r85905) > Platform: aarch64-apple-darwin20 (64-bit) > Running under: macOS Sonoma 14.3.1 > > Matrix products: default > BLAS: > > /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRblas.0.dylib > LAPACK: > /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; > LAPACK version 3.11.0 > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > time zone: America/New_York > tzcode source: internal > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > loaded via a namespace (and not attached): > [1] compiler_4.3.2 > > On Fri, Feb 16, 2024 at 7:32 AM Michael Hall wrote: > > > > It also works for me on both my current m3 and also my old x86. > > > > I also always assumed Quartz meant XQuartz. However with neither > architecture did it seem to start XQuartz in order to render. > > > > Sonoma on both machines. M3 = R 4.3.2. X86 = R 4.3.1 > > ___ > > R-SIG-Mac mailing list > > R-SIG-Mac@r-project.org > > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
I am also observing the same behavior as María with the 4.3.2 Patched binary from mac.r-project.org running under Sonoma 14.3.1 on an m3 mac. Using the default quartz() device and running the example line by line shows a blank device. If the device window is resized, however, the expected result appears. The example runs fine using x11(). The example also runs fine on both quartz() and x11() on my old x86 running under Sonoma 14.2.1. > sessionInfo() R version 4.3.2 Patched (2024-02-13 r85905) Platform: aarch64-apple-darwin20 (64-bit) Running under: macOS Sonoma 14.3.1 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRblas.0.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0 locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 time zone: America/New_York tzcode source: internal attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] compiler_4.3.2 On Fri, Feb 16, 2024 at 7:32 AM Michael Hall wrote: > > It also works for me on both my current m3 and also my old x86. > > I also always assumed Quartz meant XQuartz. However with neither architecture > did it seem to start XQuartz in order to render. > > Sonoma on both machines. M3 = R 4.3.2. X86 = R 4.3.1 > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
It also works for me on both my current m3 and also my old x86. I also always assumed Quartz meant XQuartz. However with neither architecture did it seem to start XQuartz in order to render. Sonoma on both machines. M3 = R 4.3.2. X86 = R 4.3.1 ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
You need to make clear what graphics device and R build you used: the default on a CRAN build of macOS is quartz(), which has nothing to do with XQuartz. But is this a CRAN build? AFAIK quartz() is not the default device in RStudio. And also give the information (sessionInfo()) requested in the posting guide. As Christophe Dutang has posted, this works for him on arm64 macOS (and also for me). CRAN provides both Intel and arm64 builds As the posting guide also asks, you should try R-patched: binary installers are available at https://mac.r-project.org/ for both architectures. The macOS GUI is usually called R.app (see e.g. the R-admin manual). RGUI is for Windows. On 16/02/2024 09:25, María de los Ángeles Casares de Cal via R-SIG-Mac wrote: Dear Simon and anyone else who might be interested in this: I have studied in more detail the problem referred to in the message below, and can confirm that R does not work well on macOS when I do graphics (plots). I have only tested with the "abline” command, using the examples that are in R’s help. And it does not work. I have tested it on several computers, in Terminal and with RGUI. I have also checked it in RStudio in macOS (it does work) and with R in Windows (it does work). What I have done is the following: In the "abline" command help, the first example is: ## Setup up coordinate system (with x == y aspect ratio): plot(c(-2,3), c(-1,5), type = "n", xlab = "x", ylab = "y", asp = 1) ## the x- and y-axis, and an integer grid abline(h = 0, v = 0, col = "gray60") text(1,0, "abline( h = 0 )", col = "gray60", adj = c(0, -.1)) abline(h = -1:5, v = -2:3, col = "lightgray", lty = 3) abline(a = 1, b = 2, col = 2) text(1,3, "abline( 1, 2 )", col = 2, adj = c(-.1, -.1)) if I run line by line, R does not do the plots (only open the Quartz window). If I run all together, R does the plots sometimes yes and sometimes no. I have the latest stable version of XQuartz (2.8.5) What could be the problem? Thank you in advance. Best regards. María-Ángeles Casares-de-Cal Inicio del mensaje reenviado: De: María de los Ángeles Casares de Cal Asunto: Spanish version of R, version 4.3.2, does not work Fecha: 14 de febrero de 2024, 20:29:09 CET Para: r-sig-mac@r-project.org Hi everyone, I have a problem since I have installed the last version of R 4.3.2 (spanish version) R does not work! For example: x <- 1:20#this is ok y <- 10 + rnorm(n=20,mean=0,sd=1)#this is ok plot(x,y,pch=20,col="red")#this is ok, but I have to run some times this model <- lm(y~x)#this is ok summary(model) #this is ok abline(model) #R does not plot the regression line in the window where I have the points. (And this code in RStudio works well). (I have installed the last version of XQuartz.) I do not know what is the problem. Perhaps, because is the Spanish version? How can I install the English version? Any help? Thank you in advance. Best regards. María-Ángeles Casares-de-Cal [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Brian D. Ripley, rip...@stats.ox.ac.uk Emeritus Professor of Applied Statistics, University of Oxford ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
I don't think you have described how you installed R. Did you use the installer from CRAN, or build it yourself, or get it from some other source like Homebrew or MacPorts? Duncan Murdoch On 16/02/2024 4:25 a.m., María de los Ángeles Casares de Cal via R-SIG-Mac wrote: Dear Simon and anyone else who might be interested in this: I have studied in more detail the problem referred to in the message below, and can confirm that R does not work well on macOS when I do graphics (plots). I have only tested with the "abline” command, using the examples that are in R’s help. And it does not work. I have tested it on several computers, in Terminal and with RGUI. I have also checked it in RStudio in macOS (it does work) and with R in Windows (it does work). What I have done is the following: In the "abline" command help, the first example is: ## Setup up coordinate system (with x == y aspect ratio): plot(c(-2,3), c(-1,5), type = "n", xlab = "x", ylab = "y", asp = 1) ## the x- and y-axis, and an integer grid abline(h = 0, v = 0, col = "gray60") text(1,0, "abline( h = 0 )", col = "gray60", adj = c(0, -.1)) abline(h = -1:5, v = -2:3, col = "lightgray", lty = 3) abline(a = 1, b = 2, col = 2) text(1,3, "abline( 1, 2 )", col = 2, adj = c(-.1, -.1)) if I run line by line, R does not do the plots (only open the Quartz window). If I run all together, R does the plots sometimes yes and sometimes no. I have the latest stable version of XQuartz (2.8.5) What could be the problem? Thank you in advance. Best regards. María-Ángeles Casares-de-Cal Inicio del mensaje reenviado: De: María de los Ángeles Casares de Cal Asunto: Spanish version of R, version 4.3.2, does not work Fecha: 14 de febrero de 2024, 20:29:09 CET Para: r-sig-mac@r-project.org Hi everyone, I have a problem since I have installed the last version of R 4.3.2 (spanish version) R does not work! For example: x <- 1:20#this is ok y <- 10 + rnorm(n=20,mean=0,sd=1)#this is ok plot(x,y,pch=20,col="red")#this is ok, but I have to run some times this model <- lm(y~x)#this is ok summary(model) #this is ok abline(model) #R does not plot the regression line in the window where I have the points. (And this code in RStudio works well). (I have installed the last version of XQuartz.) I do not know what is the problem. Perhaps, because is the Spanish version? How can I install the English version? Any help? Thank you in advance. Best regards. María-Ángeles Casares-de-Cal [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
Dear Maria, It works perfectly my MacBook (Apple M1). > R.version _ platform aarch64-apple-darwin20 arch aarch64 os darwin20 system aarch64, darwin20 status major 4 minor 3.2 year 2023 month 10 day31 svn rev85441 language R version.string R version 4.3.2 (2023-10-31) nickname Eye Holes Do you use the correct version of R? Christophe - Christophe DUTANG LJK, Ensimag, Grenoble INP, UGA, France ILB research fellow Web: http://dutangc.free.fr - > Le 16 févr. 2024 à 10:25, María de los Ángeles Casares de Cal via R-SIG-Mac > a écrit : > > Dear Simon and anyone else who might be interested in this: > > I have studied in more detail the problem referred to in the message below, > and can confirm that R does not work well on macOS when I do graphics (plots). > I have only tested with the "abline” command, using the examples that are in > R’s help. And it does not work. > I have tested it on several computers, in Terminal and with RGUI. > I have also checked it in RStudio in macOS (it does work) and with R in > Windows (it does work). > > What I have done is the following: > In the "abline" command help, the first example is: > ## Setup up coordinate system (with x == y aspect ratio): > plot(c(-2,3), c(-1,5), type = "n", xlab = "x", ylab = "y", asp = 1) > ## the x- and y-axis, and an integer grid > abline(h = 0, v = 0, col = "gray60") > text(1,0, "abline( h = 0 )", col = "gray60", adj = c(0, -.1)) > abline(h = -1:5, v = -2:3, col = "lightgray", lty = 3) > abline(a = 1, b = 2, col = 2) > text(1,3, "abline( 1, 2 )", col = 2, adj = c(-.1, -.1)) > > if I run line by line, R does not do the plots (only open the Quartz window). > If I run all together, R does the plots sometimes yes and sometimes no. > > I have the latest stable version of XQuartz (2.8.5) > > What could be the problem? > > Thank you in advance. > Best regards. > María-Ángeles Casares-de-Cal > > >> Inicio del mensaje reenviado: >> >> De: María de los Ángeles Casares de Cal >> Asunto: Spanish version of R, version 4.3.2, does not work >> Fecha: 14 de febrero de 2024, 20:29:09 CET >> Para: r-sig-mac@r-project.org >> >> Hi everyone, >> >> I have a problem since I have installed the last version of R 4.3.2 (spanish >> version) >> R does not work! >> >> For example: >> >> x <- 1:20 #this is ok >> y <- 10 + rnorm(n=20,mean=0,sd=1) #this is ok >> plot(x,y,pch=20,col="red") #this is ok, but I have to run some >> times this >> model <- lm(y~x)#this is ok >> summary(model) #this is ok >> abline(model) #R does not plot the regression line in the >> window where I have the points. >> >> (And this code in RStudio works well). >> >> (I have installed the last version of XQuartz.) >> >> I do not know what is the problem. >> Perhaps, because is the Spanish version? >> How can I install the English version? >> >> Any help? >> Thank you in advance. >> >> Best regards. >> María-Ángeles Casares-de-Cal > > > [[alternative HTML version deleted]] > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
[R-SIG-Mac] Graphics in R, version 4.3.2, does not work well in MacOS
Dear Simon and anyone else who might be interested in this: I have studied in more detail the problem referred to in the message below, and can confirm that R does not work well on macOS when I do graphics (plots). I have only tested with the "abline” command, using the examples that are in R’s help. And it does not work. I have tested it on several computers, in Terminal and with RGUI. I have also checked it in RStudio in macOS (it does work) and with R in Windows (it does work). What I have done is the following: In the "abline" command help, the first example is: ## Setup up coordinate system (with x == y aspect ratio): plot(c(-2,3), c(-1,5), type = "n", xlab = "x", ylab = "y", asp = 1) ## the x- and y-axis, and an integer grid abline(h = 0, v = 0, col = "gray60") text(1,0, "abline( h = 0 )", col = "gray60", adj = c(0, -.1)) abline(h = -1:5, v = -2:3, col = "lightgray", lty = 3) abline(a = 1, b = 2, col = 2) text(1,3, "abline( 1, 2 )", col = 2, adj = c(-.1, -.1)) if I run line by line, R does not do the plots (only open the Quartz window). If I run all together, R does the plots sometimes yes and sometimes no. I have the latest stable version of XQuartz (2.8.5) What could be the problem? Thank you in advance. Best regards. María-Ángeles Casares-de-Cal > Inicio del mensaje reenviado: > > De: María de los Ángeles Casares de Cal > Asunto: Spanish version of R, version 4.3.2, does not work > Fecha: 14 de febrero de 2024, 20:29:09 CET > Para: r-sig-mac@r-project.org > > Hi everyone, > > I have a problem since I have installed the last version of R 4.3.2 (spanish > version) > R does not work! > > For example: > > x <- 1:20 #this is ok > y <- 10 + rnorm(n=20,mean=0,sd=1) #this is ok > plot(x,y,pch=20,col="red")#this is ok, but I have to run some > times this > model <- lm(y~x)#this is ok > summary(model)#this is ok > abline(model) #R does not plot the regression line in > the window where I have the points. > > (And this code in RStudio works well). > > (I have installed the last version of XQuartz.) > > I do not know what is the problem. > Perhaps, because is the Spanish version? > How can I install the English version? > > Any help? > Thank you in advance. > > Best regards. > María-Ángeles Casares-de-Cal [[alternative HTML version deleted]] ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
