[R-SIG-Mac] Problem upgrading to R version 2.10.0.
First I downloaded the Mac binary from CRAN, but when I double clicked
on install icon it told me ``Couldn't open R-2.10.0.pkg. This package
type requires Mac OS X 10.5.''
I guess I don't have 10.5.
Session info:
R version 2.9.1 (2009-06-26)
i386-apple-darwin8.11.1
locale:
C
attached base packages:
[1] datasets utils stats graphics grDevices methods base
other attached packages:
[1] misc_0.0-11fortunes_1.3-6 MASS_7.2-47
(None of the information that I can extract from my machine refers to
``MAC OS X 10.x''; it only refers to apple-darwinwhatever --- and
there never appears to be any information as to the connection between
the different forms of referent.)
Anyhow, I then decided to try to roll my own. (This has worked in the
past.) I downloaded the tar file of R 2.10.0, did ./configure and make.
It went about its business for a while and then stopped with an error
message.
The tail end of the screen output is:
.
.
.
building package 'tcltk'
mkdir ../../../library/tcltk
mkdir ../../../library/tcltk/R
mkdir ../../../library/tcltk/exec
mkdir ../../../library/tcltk/po
making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_unix.d from tcltk_unix.c
gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/
local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/
include-fPIC -g -O2 -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/
local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/
include-fPIC -g -O2 -c tcltk.c -o tcltk.o
gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/
local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/
include-fPIC -g -O2 -c tcltk_unix.c -o tcltk_unix.o
In file included from tcltk_unix.c:23:
../../../../include/R_ext/eventloop.h:73: warning: 'struct timeval'
declared inside parameter list
../../../../include/R_ext/eventloop.h:73: warning: its scope is
only this definition or declaration, which is probably not what you
want
gcc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -
mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -
multiply_defined suppress -L/sw/lib -L/usr/local/lib -o tcltk.so
init.o tcltk.o tcltk_unix.o -L/usr/local/lib -ltcl8.5 -L/usr/local/
lib -ltk8.5 -L/usr/X11R6/lib -lX11 -Wl,-weak-lXss -lXext -
L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/
libRblas.dylib -lintl -liconv -lc -Wl,-framework -Wl,CoreFoundation
/usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: for architecture
x86_64 object: /usr/local/lib/libtk8.5.dylib malformed object
(unknown load command 7)
make[4]: *** [tcltk.so] Error 1
make[3]: *** [all] Error 1
make[2]: *** [R] Error 1
make[1]: *** [R] Error 1
make: *** [R] Error 1
I haven't a clue what to do about this. And so I'm stuck. I'd
really like to be using
the latest version of R, but I seem to be thwarted at every turn.
Can anyone help me out?
cheers,
Rolf Turner
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Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.
On Oct 27, 2009, at 16:43 , Rolf Turner wrote: First I downloaded the Mac binary from CRAN, but when I double clicked on install icon it told me ``Couldn't open R-2.10.0.pkg. This package type requires Mac OS X 10.5.'' I guess I don't have 10.5. Click on the Apple icon on the left-top corner and then on About this Mac. It will say something like Mac OS X Version 10.5.8 (or whatever version you have). The pkg build is for 10.5 and higher only (as the description prominently says). Session info: R version 2.9.1 (2009-06-26) i386-apple-darwin8.11.1 locale: C attached base packages: [1] datasets utils stats graphics grDevices methods base other attached packages: [1] misc_0.0-11fortunes_1.3-6 MASS_7.2-47 (None of the information that I can extract from my machine refers to ``MAC OS X 10.x''; it only refers to apple-darwinwhatever --- and there never appears to be any information as to the connection between the different forms of referent.) Anyhow, I then decided to try to roll my own. (This has worked in the past.) I downloaded the tar file of R 2.10.0, did ./configure and make. It went about its business for a while and then stopped with an error message. The tail end of the screen output is: . . . building package 'tcltk' mkdir ../../../library/tcltk mkdir ../../../library/tcltk/R mkdir ../../../library/tcltk/exec mkdir ../../../library/tcltk/po making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/ local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/ include-fPIC -g -O2 -c init.c -o init.o gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/ local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/ include-fPIC -g -O2 -c tcltk.c -o tcltk.o gcc -std=gnu99 -I../../../../include -I/usr/local/include -I/usr/ local/include -I/usr/X11R6/include -I/sw/include -I/usr/local/ include-fPIC -g -O2 -c tcltk_unix.c -o tcltk_unix.o In file included from tcltk_unix.c:23: ../../../../include/R_ext/eventloop.h:73: warning: 'struct timeval' declared inside parameter list ../../../../include/R_ext/eventloop.h:73: warning: its scope is only this definition or declaration, which is probably not what you want gcc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names - mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module - multiply_defined suppress -L/sw/lib -L/usr/local/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/local/lib -ltcl8.5 -L/usr/local/ lib -ltk8.5 -L/usr/X11R6/lib -lX11 -Wl,-weak-lXss -lXext - L../../../../lib -lR -dylib_file libRblas.dylib:../../../../lib/ libRblas.dylib -lintl -liconv -lc -Wl,-framework -Wl,CoreFoundation /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: for architecture x86_64 object: /usr/local/lib/libtk8.5.dylib malformed object (unknown load command 7) make[4]: *** [tcltk.so] Error 1 make[3]: *** [all] Error 1 make[2]: *** [R] Error 1 make[1]: *** [R] Error 1 make: *** [R] Error 1 I haven't a clue what to do about this. And so I'm stuck. I'd really like to be using the latest version of R, Well, if that's all you want then just go to http://r.research.att.com/ but I seem to be thwarted at every turn. Can anyone help me out? It seems as if you're trying to compile 64-bit version of R on Tiger which won't work. Without further details on the tools you installed, exact OS version and the like there is not much we can help with (please have a look at the R for Mac FAQ). Cheers, Simon ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.
On 28/10/2009, at 10:34 AM, Simon Urbanek wrote:
snip
Well, if that's all you want then just go to
http://r.research.att.com/
Thanks, I'll try that ... but why isn't that directly available
on CRAN? Or at least pointed to there? In other words, how
would I have known to go there if you hadn't told me?
but I seem to be thwarted at every turn. Can anyone help me out?
It seems as if you're trying to compile 64-bit version of R on Tiger
which won't work. Without further details on the tools you installed,
exact OS version and the like there is not much we can help with
(please have a look at the R for Mac FAQ).
I certainly didn't ***want*** to build a 64-bit version. I
just downloaded the tar file file and went thought the usual
routine.
Is there some ``flag'' that I should set to obtain a build of
a 32-bit version? I would have thought that this would be the
default.
cheers,
Rolf Turner
##
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Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.
From: r-sig-mac-boun...@stat.math.ethz.ch [r-sig-mac-boun...@stat.math.ethz.ch]
On Behalf Of Rolf Turner [r.tur...@auckland.ac.nz]
Sent: October 27, 2009 2:59 PM
To: Simon Urbanek
Cc: R-Sig Mac
Subject: Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.
On 28/10/2009, at 10:34 AM, Simon Urbanek wrote:
snip
Well, if that's all you want then just go to
http://r.research.att.com/
Thanks, I'll try that ... but why isn't that directly available
on CRAN? Or at least pointed to there? In other words, how
would I have known to go there if you hadn't told me?
It's there, visit http://cran.r-project.org/, select the MacOS X option in the
Download and
Install R area, then look down near the bottom of that page to see
Information, tools and most recent daily builds of the R GUI, R-patched and
R-devel can be
found at http://R.research.att.com/. Please visit that page especially during
beta stages to
help us test the Mac OS X binaries before final release! The page has links to
other builds,
including a 'Leopart build' which includes 64-bit architectures.
HTH
Steve McKinney
but I seem to be thwarted at every turn. Can anyone help me out?
It seems as if you're trying to compile 64-bit version of R on Tiger
which won't work. Without further details on the tools you installed,
exact OS version and the like there is not much we can help with
(please have a look at the R for Mac FAQ).
I certainly didn't ***want*** to build a 64-bit version. I
just downloaded the tar file file and went thought the usual
routine.
Is there some ``flag'' that I should set to obtain a build of
a 32-bit version? I would have thought that this would be the
default.
cheers,
Rolf Turner
##
Attention:\ This e-mail message is privileged and confid...{{dropped:9}}
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R-SIG-Mac@stat.math.ethz.ch
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Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.
On 28/10/2009, at 12:11 PM, Steven McKinney wrote:
On 28/10/2009, at 10:34 AM, Simon Urbanek wrote:
snip
Well, if that's all you want then just go to
http://r.research.att.com/
Thanks, I'll try that ... but why isn't that directly
available
on CRAN? Or at least pointed to there? In other words, how
would I have known to go there if you hadn't told me?
It's there, visit http://cran.r-project.org/, select the MacOS X
option in the Download and
Install R area, then look down near the bottom of that page to see
Information, tools and most recent daily builds of the R GUI, R-
patched and R-devel can be
found at http://R.research.att.com/. Please visit that page
especially during beta stages to
help us test the Mac OS X binaries before final release! The page
has links to other builds,
including a 'Leopart build' which includes 64-bit architectures.
HTH
Yes, thanks, I see it now. But it wasn't clear to me that I needed
to go there.
I just assumed (silly me!) that the top listed item would be the
appropriate
one. However I now see that it does clearly say it is for Mac OS X
10.5 and
above. (This was less than completely helpful to me until just now
when a
couple of people explained to me how to determine what the number of
my MAC OS X actually is. I should explain that I am ***not*** a Mac
user
by nature. I am forced by my work place to use a Mac --- the choice was
either that or Windoze. No poss. of using Linux. Psigh!)
cheers,
Rolf Turner
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