[sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread Samuel Lelievre


2015-02-23 10:40:06 UTC+1, Dima Pasechnik:

 On 2015-02-23, John Cremona john.c...@gmail.com javascript: wrote: 
  On 22 February 2015 at 22:27, Volker Braun vbrau...@gmail.com 
 javascript: wrote: 
  Looks like your system git is incompatible with the Sage libcrypto and 
 the 
  dev scripts launch git without sage-native-execute. 
  
  THat would be quite serious -- this is a standard ubuntu 14.04 server 
  install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1. 

 Given that the current git release is 2.3, this is old... 
 So the way would be to build Sage git spkg first thing. 

 Dima


Since a serious vulnerability was found in git in December 2014,
and quickly fixed, updating to a newer version of git is advisable.

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Re: [sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread leif
On 02/23/2015 01:51 PM, Samuel Lelievre wrote:
 2015-02-23 10:40:06 UTC+1, Dima Pasechnik:
 
 On 2015-02-23, John Cremona john.c...@gmail.com javascript: wrote:
  On 22 February 2015 at 22:27, Volker Braun vbrau...@gmail.com
 javascript: wrote:
  Looks like your system git is incompatible with the Sage
 libcrypto and the
  dev scripts launch git without sage-native-execute.
 
  THat would be quite serious -- this is a standard ubuntu 14.04 server
  install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1.
 
 Given that the current git release is 2.3, this is old...
 So the way would be to build Sage git spkg first thing.
 
 Dima
 
 
 Since a serious vulnerability was found in git in December 2014,
 and quickly fixed, updating to a newer version of git is advisable.

A *couple of* git versions have been fixed, including the one above [1].

And FWIW, in most cases *nix systems aren't affected; M$ and Apple in
contrast are.


-leif

[1] https://launchpad.net/ubuntu/+source/git/1:1.9.1-1ubuntu0.1

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Re: [sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread Volker Braun
I made http://trac.sagemath.org/ticket/17839



On Monday, February 23, 2015 at 2:16:17 PM UTC+1, leif wrote:

 On 02/23/2015 01:51 PM, Samuel Lelievre wrote: 
  2015-02-23 10:40:06 UTC+1, Dima Pasechnik: 
  
  On 2015-02-23, John Cremona john.c...@gmail.com javascript: 
 wrote: 
   On 22 February 2015 at 22:27, Volker Braun vbrau...@gmail.com 
  javascript: wrote: 
   Looks like your system git is incompatible with the Sage 
  libcrypto and the 
   dev scripts launch git without sage-native-execute. 
   
   THat would be quite serious -- this is a standard ubuntu 14.04 
 server 
   install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1. 
  
  Given that the current git release is 2.3, this is old... 
  So the way would be to build Sage git spkg first thing. 
  
  Dima 
  
  
  Since a serious vulnerability was found in git in December 2014, 
  and quickly fixed, updating to a newer version of git is advisable. 

 A *couple of* git versions have been fixed, including the one above [1]. 

 And FWIW, in most cases *nix systems aren't affected; M$ and Apple in 
 contrast are. 


 -leif 

 [1] https://launchpad.net/ubuntu/+source/git/1:1.9.1-1ubuntu0.1 



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Re: [sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread John Cremona
On 23 February 2015 at 13:47, Volker Braun vbraun.n...@gmail.com wrote:
 I made http://trac.sagemath.org/ticket/17839

I'll be happy to test that when ready.

I certainly would not expect a vulnerability not to have neen fixed in
the standard ubuntu version, but have no ideal why tey are still stuck
at 1.9.1.

John




 On Monday, February 23, 2015 at 2:16:17 PM UTC+1, leif wrote:

 On 02/23/2015 01:51 PM, Samuel Lelievre wrote:
  2015-02-23 10:40:06 UTC+1, Dima Pasechnik:
 
  On 2015-02-23, John Cremona john.c...@gmail.com javascript:
  wrote:
   On 22 February 2015 at 22:27, Volker Braun vbrau...@gmail.com
  javascript: wrote:
   Looks like your system git is incompatible with the Sage
  libcrypto and the
   dev scripts launch git without sage-native-execute.
  
   THat would be quite serious -- this is a standard ubuntu 14.04
  server
   install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1.
 
  Given that the current git release is 2.3, this is old...
  So the way would be to build Sage git spkg first thing.
 
  Dima
 
 
  Since a serious vulnerability was found in git in December 2014,
  and quickly fixed, updating to a newer version of git is advisable.

 A *couple of* git versions have been fixed, including the one above [1].

 And FWIW, in most cases *nix systems aren't affected; M$ and Apple in
 contrast are.


 -leif

 [1] https://launchpad.net/ubuntu/+source/git/1:1.9.1-1ubuntu0.1

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Re: [sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread Volker Braun
it is ready ;-)

On Monday, February 23, 2015 at 2:49:53 PM UTC+1, John Cremona wrote:

 On 23 February 2015 at 13:47, Volker Braun vbrau...@gmail.com 
 javascript: wrote: 
  I made http://trac.sagemath.org/ticket/17839 

 I'll be happy to test that when ready. 

 I certainly would not expect a vulnerability not to have neen fixed in 
 the standard ubuntu version, but have no ideal why tey are still stuck 
 at 1.9.1. 

 John 

  
  
  
  On Monday, February 23, 2015 at 2:16:17 PM UTC+1, leif wrote: 
  
  On 02/23/2015 01:51 PM, Samuel Lelievre wrote: 
   2015-02-23 10:40:06 UTC+1, Dima Pasechnik: 
   
   On 2015-02-23, John Cremona john.c...@gmail.com javascript: 
   wrote: 
On 22 February 2015 at 22:27, Volker Braun vbrau...@gmail.com 
   javascript: wrote: 
Looks like your system git is incompatible with the Sage 
   libcrypto and the 
dev scripts launch git without sage-native-execute. 

THat would be quite serious -- this is a standard ubuntu 14.04 
   server 
install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1. 
   
   Given that the current git release is 2.3, this is old... 
   So the way would be to build Sage git spkg first thing. 
   
   Dima 
   
   
   Since a serious vulnerability was found in git in December 2014, 
   and quickly fixed, updating to a newer version of git is advisable. 
  
  A *couple of* git versions have been fixed, including the one above 
 [1]. 
  
  And FWIW, in most cases *nix systems aren't affected; M$ and Apple in 
  contrast are. 
  
  
  -leif 
  
  [1] https://launchpad.net/ubuntu/+source/git/1:1.9.1-1ubuntu0.1 
  
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 Groups 
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 javascript:. 
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Re: [sage-release] Sage 6.6.beta1 released

2015-02-23 Thread Emmanuel Charpentier
Datapoint : starting from scratch (make distclean), a sage 6.6-beta1 built 
in *parallell* (export MAKE=make -j8) gives a lot of git-related errors 
(same error as the parent) when making ptestlong.; restarting from scrach 
and building *serially* (MAKE is not defined) gives a sage that passes al 
testlong.

Something in the scripts might be fishy...

HTH,

--
Emmanuel Charpentier

Le dimanche 22 février 2015 23:27:23 UTC+1, Volker Braun a écrit :

 Looks like your system git is incompatible with the Sage libcrypto and the 
 dev scripts launch git without sage-native-execute.

 On Sunday, February 22, 2015 at 10:34:27 PM UTC+1, John Cremona wrote:

 I upgraded and buiult OK on ubuntu 14.04, but ptestlong produces many 
 errors, including this sort of thing: 

 sage -t --long src/sage/dev/test/trac_server.py  # 2 doctests failed 
 File src/sage/dev/test/trac_server.py, line 40, in 
 sage.dev.test.trac_server.DoctestTracServer.__init__ 
 Failed example: 
 type(DoctestTracServer()) 
 Expected: 
 class 'sage.dev.test.trac_server.DoctestTracServer' 
 Got: 
 git: /home/jec/sage/local/lib/libcrypto.so.1.0.0: no version 
 information available (required by git) 
 class 'sage.dev.test.trac_server.DoctestTracServer' 

 The file /home/jec/sage/local/lib/libcrypto.so.1.0.0 exists and looks 
 ok to me.  Why would git want any version information about a lib 
 file? 

 John 

 On 21 February 2015 at 14:06, Volker Braun vbrau...@gmail.com wrote: 
  As usual, get the develop branch or the source tarball from 
  http://www.sagemath.org/download-latest.html 
  
  6c5572a Updated Sage version to 6.6.beta1 
  3463371 Trac #17820: Update to IPython 2.4.1 
  392ddf7 Trac #10257: Add checking memory functions 
  30ee360 Trac #17796: Configure the gp interface in a single place 
  fc874a2 Trac #17761: clean-up of Tamari lattice and add them as example 
 of 
  poset 
  306efcb Trac #17706: failing 4ti2-related doctests in sandpiles 
  b3e81de Trac #12822: Portuguese translation of Tutorial 
  7c473f5 Trac #17812: Remove unused 'html-no-pix' docbuild format 
  1bd24a2 Trac #17804: Cleanup of sage.graphs.pq_trees 
  ee8936b Trac #17794: Fix csage build 
  3386971 Trac #17323: Implement primes_of_bad_reduction to work over 
 Number 
  Fields 
  ed2927b Trac #17194: Minimal bindings for optional arb package 
  26eb8fa Trac #16630: Fix category for finite Coxeter groups 
  9fad27f Trac #14109: Quasisymmetric_inject_shorthands help file 
 improved 
  efe44a0 Trac #13304: Very inefficient scalar multiplication on 
  FreeModule_ambient with somewhat large rank 
  46fd685 Trac #17390: GAP 4.7.7 
  c1579f7 Trac #17816: upgrade flint to version 2.4.5 
  ab81a5c Trac #17752: finite_state_module: Update references 
  3c59b0e Trac #17734: RealNumber constructor from short literal ignores 
  rounding mode 
  2ce8998 Trac #13613: implement residue() for padic extensions 
  5fb1fd6 Trac #17802: correct some bad doc formatting in combinat folder 
  b85c3eb Trac #17779: Remove deprecated group_algebra.py 
  66c264d Trac #17775: Remove hasattr(x, 'parent') 
  7ec7080 Trac #17751: add cross-link to finite_state_machines_generators 
  4d14a92 Trac #17717: Failure to reduce int modulo large prime 
  da9ed4e Trac #17712: Adds memoization to the branch and bound for 
 vertex 
  separation 
  c771663 Trac #17711: Pre-processing for vertex separation 
  6591052 Trac #17707: Test if a graph is asteroidal triple free 
  45fea10 Trac #17704: Small clean-up in expect.py 
  a84430a Trac #16055: Implement Jordan algebras 
  0b960be Trac #17695: Slightly fasten is_cyclotomic() 
  58fe311 Trac #17688: Upgrade optional arb spkg to 2.5.0 
  29634dc Trac #17653: Deprecate src/sage/misc/db.py 
  417b107 Trac #17584: Simplify numpy import in vectors 
  9ff4fea Trac #17480: Improve documentation of element.pyx 
  3518eb6 Trac #17386: Enumerate points of bounded height in 
 projective/affine 
  space over number fields 
  efe7953 Trac #17293: Taking the dual of a negated isogeny raises an 
 error 
  47b587c Trac #17245: Matrix class __init__ for sparse matrices is 
  incorrectly documented 
  30bb116 Trac #17064: Convert `database_odlyzko_zeta` to new-style 
 package 
  a4ea588 Updated Sage version to 6.6.beta0 
  
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 Groups 
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Re: [sage-release] Sage 6.6.beta1 released

2015-02-23 Thread John Cremona
On 22 February 2015 at 22:27, Volker Braun vbraun.n...@gmail.com wrote:
 Looks like your system git is incompatible with the Sage libcrypto and the
 dev scripts launch git without sage-native-execute.

THat would be quite serious -- this is a standard ubuntu 14.04 server
install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1.

As for Emmanuel, I built this in parallel.  I will try make distclean
and a non-parallel build and report back (but not for a while!)

John


 On Sunday, February 22, 2015 at 10:34:27 PM UTC+1, John Cremona wrote:

 I upgraded and buiult OK on ubuntu 14.04, but ptestlong produces many
 errors, including this sort of thing:

 sage -t --long src/sage/dev/test/trac_server.py  # 2 doctests failed
 File src/sage/dev/test/trac_server.py, line 40, in
 sage.dev.test.trac_server.DoctestTracServer.__init__
 Failed example:
 type(DoctestTracServer())
 Expected:
 class 'sage.dev.test.trac_server.DoctestTracServer'
 Got:
 git: /home/jec/sage/local/lib/libcrypto.so.1.0.0: no version
 information available (required by git)
 class 'sage.dev.test.trac_server.DoctestTracServer'

 The file /home/jec/sage/local/lib/libcrypto.so.1.0.0 exists and looks
 ok to me.  Why would git want any version information about a lib
 file?

 John

 On 21 February 2015 at 14:06, Volker Braun vbrau...@gmail.com wrote:
  As usual, get the develop branch or the source tarball from
  http://www.sagemath.org/download-latest.html
 
  6c5572a Updated Sage version to 6.6.beta1
  3463371 Trac #17820: Update to IPython 2.4.1
  392ddf7 Trac #10257: Add checking memory functions
  30ee360 Trac #17796: Configure the gp interface in a single place
  fc874a2 Trac #17761: clean-up of Tamari lattice and add them as example
  of
  poset
  306efcb Trac #17706: failing 4ti2-related doctests in sandpiles
  b3e81de Trac #12822: Portuguese translation of Tutorial
  7c473f5 Trac #17812: Remove unused 'html-no-pix' docbuild format
  1bd24a2 Trac #17804: Cleanup of sage.graphs.pq_trees
  ee8936b Trac #17794: Fix csage build
  3386971 Trac #17323: Implement primes_of_bad_reduction to work over
  Number
  Fields
  ed2927b Trac #17194: Minimal bindings for optional arb package
  26eb8fa Trac #16630: Fix category for finite Coxeter groups
  9fad27f Trac #14109: Quasisymmetric_inject_shorthands help file improved
  efe44a0 Trac #13304: Very inefficient scalar multiplication on
  FreeModule_ambient with somewhat large rank
  46fd685 Trac #17390: GAP 4.7.7
  c1579f7 Trac #17816: upgrade flint to version 2.4.5
  ab81a5c Trac #17752: finite_state_module: Update references
  3c59b0e Trac #17734: RealNumber constructor from short literal ignores
  rounding mode
  2ce8998 Trac #13613: implement residue() for padic extensions
  5fb1fd6 Trac #17802: correct some bad doc formatting in combinat folder
  b85c3eb Trac #17779: Remove deprecated group_algebra.py
  66c264d Trac #17775: Remove hasattr(x, 'parent')
  7ec7080 Trac #17751: add cross-link to finite_state_machines_generators
  4d14a92 Trac #17717: Failure to reduce int modulo large prime
  da9ed4e Trac #17712: Adds memoization to the branch and bound for vertex
  separation
  c771663 Trac #17711: Pre-processing for vertex separation
  6591052 Trac #17707: Test if a graph is asteroidal triple free
  45fea10 Trac #17704: Small clean-up in expect.py
  a84430a Trac #16055: Implement Jordan algebras
  0b960be Trac #17695: Slightly fasten is_cyclotomic()
  58fe311 Trac #17688: Upgrade optional arb spkg to 2.5.0
  29634dc Trac #17653: Deprecate src/sage/misc/db.py
  417b107 Trac #17584: Simplify numpy import in vectors
  9ff4fea Trac #17480: Improve documentation of element.pyx
  3518eb6 Trac #17386: Enumerate points of bounded height in
  projective/affine
  space over number fields
  efe7953 Trac #17293: Taking the dual of a negated isogeny raises an
  error
  47b587c Trac #17245: Matrix class __init__ for sparse matrices is
  incorrectly documented
  30bb116 Trac #17064: Convert `database_odlyzko_zeta` to new-style
  package
  a4ea588 Updated Sage version to 6.6.beta0
 
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[sage-release] Re: Sage 6.6.beta1 released

2015-02-23 Thread Dima Pasechnik
On 2015-02-23, John Cremona john.crem...@gmail.com wrote:
 On 22 February 2015 at 22:27, Volker Braun vbraun.n...@gmail.com wrote:
 Looks like your system git is incompatible with the Sage libcrypto and the
 dev scripts launch git without sage-native-execute.

 THat would be quite serious -- this is a standard ubuntu 14.04 server
 install, and the ubuntu git package is 1:1.9.1-1ubuntu0.1.

Given that the current git release is 2.3, this is old...
So the way would be to build Sage git spkg first thing.

Dima


 As for Emmanuel, I built this in parallel.  I will try make distclean
 and a non-parallel build and report back (but not for a while!)

 John


 On Sunday, February 22, 2015 at 10:34:27 PM UTC+1, John Cremona wrote:

 I upgraded and buiult OK on ubuntu 14.04, but ptestlong produces many
 errors, including this sort of thing:

 sage -t --long src/sage/dev/test/trac_server.py  # 2 doctests failed
 File src/sage/dev/test/trac_server.py, line 40, in
 sage.dev.test.trac_server.DoctestTracServer.__init__
 Failed example:
 type(DoctestTracServer())
 Expected:
 class 'sage.dev.test.trac_server.DoctestTracServer'
 Got:
 git: /home/jec/sage/local/lib/libcrypto.so.1.0.0: no version
 information available (required by git)
 class 'sage.dev.test.trac_server.DoctestTracServer'

 The file /home/jec/sage/local/lib/libcrypto.so.1.0.0 exists and looks
 ok to me.  Why would git want any version information about a lib
 file?

 John

 On 21 February 2015 at 14:06, Volker Braun vbrau...@gmail.com wrote:
  As usual, get the develop branch or the source tarball from
  http://www.sagemath.org/download-latest.html
 
  6c5572a Updated Sage version to 6.6.beta1
  3463371 Trac #17820: Update to IPython 2.4.1
  392ddf7 Trac #10257: Add checking memory functions
  30ee360 Trac #17796: Configure the gp interface in a single place
  fc874a2 Trac #17761: clean-up of Tamari lattice and add them as example
  of
  poset
  306efcb Trac #17706: failing 4ti2-related doctests in sandpiles
  b3e81de Trac #12822: Portuguese translation of Tutorial
  7c473f5 Trac #17812: Remove unused 'html-no-pix' docbuild format
  1bd24a2 Trac #17804: Cleanup of sage.graphs.pq_trees
  ee8936b Trac #17794: Fix csage build
  3386971 Trac #17323: Implement primes_of_bad_reduction to work over
  Number
  Fields
  ed2927b Trac #17194: Minimal bindings for optional arb package
  26eb8fa Trac #16630: Fix category for finite Coxeter groups
  9fad27f Trac #14109: Quasisymmetric_inject_shorthands help file improved
  efe44a0 Trac #13304: Very inefficient scalar multiplication on
  FreeModule_ambient with somewhat large rank
  46fd685 Trac #17390: GAP 4.7.7
  c1579f7 Trac #17816: upgrade flint to version 2.4.5
  ab81a5c Trac #17752: finite_state_module: Update references
  3c59b0e Trac #17734: RealNumber constructor from short literal ignores
  rounding mode
  2ce8998 Trac #13613: implement residue() for padic extensions
  5fb1fd6 Trac #17802: correct some bad doc formatting in combinat folder
  b85c3eb Trac #17779: Remove deprecated group_algebra.py
  66c264d Trac #17775: Remove hasattr(x, 'parent')
  7ec7080 Trac #17751: add cross-link to finite_state_machines_generators
  4d14a92 Trac #17717: Failure to reduce int modulo large prime
  da9ed4e Trac #17712: Adds memoization to the branch and bound for vertex
  separation
  c771663 Trac #17711: Pre-processing for vertex separation
  6591052 Trac #17707: Test if a graph is asteroidal triple free
  45fea10 Trac #17704: Small clean-up in expect.py
  a84430a Trac #16055: Implement Jordan algebras
  0b960be Trac #17695: Slightly fasten is_cyclotomic()
  58fe311 Trac #17688: Upgrade optional arb spkg to 2.5.0
  29634dc Trac #17653: Deprecate src/sage/misc/db.py
  417b107 Trac #17584: Simplify numpy import in vectors
  9ff4fea Trac #17480: Improve documentation of element.pyx
  3518eb6 Trac #17386: Enumerate points of bounded height in
  projective/affine
  space over number fields
  efe7953 Trac #17293: Taking the dual of a negated isogeny raises an
  error
  47b587c Trac #17245: Matrix class __init__ for sparse matrices is
  incorrectly documented
  30bb116 Trac #17064: Convert `database_odlyzko_zeta` to new-style
  package
  a4ea588 Updated Sage version to 6.6.beta0
 
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Re: [sage-release] Sage 6.6.beta1 released

2015-02-23 Thread Justin C. Walker

On Feb 21, 2015, at 06:06 , Volker Braun wrote:

 As usual, get the develop branch or the source tarball from 
 http://www.sagemath.org/download-latest.html

Built from tarball on two OS X systems:
10.6.8: no problems on build; tests ('ptestlong') showed one failure:
sage -t --long --warn-long 84.5 
src/sage/schemes/projective/projective_rational_point.py
**
File src/sage/schemes/projective/projective_rational_point.py, line 162, in 
sage.schemes.projective.projective_rational_point.enum_projective_number_field
Failed example:
enum_projective_number_field(X(K),125)
Expected:
[(0 : 0 : 1), (-1 : -1 : 1), (1 : 1 : 1), (-1/5*v^2 : -1/5*v^2 : 1), (-v : 
-v : 1),
(1/5*v^2 : 1/5*v^2 : 1), (v : v : 1), (1 : 1 : 0)]
Got:
[(0 : 0 : 1), (-1 : -1 : 1), (1 : 1 : 1), (1 : 1 : 0)]
**

10.10.2:
Built w/o problems, and all tests ('ptestlong') passed.

Justin

--
Justin C. Walker, Curmudgeon at Large
Director
Institute for the Enhancement of the Director's Income
---
If you don't know where you're going,
you might wind up someplace else.
   - Yogi Berra
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