Re: [sage-release] Sage 9.2.beta1 released
> On Jun 17, 2020, at 13:22 , Dima Pasechnik wrote: > > On Wed, Jun 17, 2020 at 6:38 PM kcrisman wrote: >> >> >> >> >>> >>> mkdir ../../../../library/tools/libs >>> >>> installing 'sysdata.rda' >>> >>> dyld: Library not loaded: >>> /Users/.../sage/local/lib/libopenblas_haswellp-r0.3.6.dylib >>> >>> Referenced from: /Users/.../sage/local/lib/R/lib/libR.dylib >> >> >> For reference, doing >> >> $ rm -rf local/lib/R/ >> >> ended up solving the problem. But that seems like a bug - shouldn't the >> previous R install properly be deleted, in our current paradigm of first >> uninstalling (if I understand it correctly)? > > yes, it appears to be a bug (macOS-specific?). Probably the list of > files installed by R spkg is incomplete, and so what's in the list is > removed, but > this one is not. > You can see the file list in local/var/lib/sage/installed/ > and check whether libR.dylib > is there. Not sure this is related to the above problem, but I checked the results of the builds in each of my macOS systems (10.13, 10.14, 10.15), and there are no “libR.*” files in either SAGE_ROOT/local/var/lib/sage/installed or SAGE_ROOT/local/lib. Is one of the Mac package gizmos (macports/homebrew/etc) involved? Justin -- Justin C. Walker Curmudgeon-at-large -- Network, n., Difference between work charged for and work done -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/19F6CB6C-942B-4B87-ABE5-A05F60F27365%40mac.com.
[sage-release] Re: Sage 9.2.beta1 released
A possibly related ticket: https://trac.sagemath.org/ticket/28008 On Wednesday, June 17, 2020 at 9:41:43 AM UTC-7, kcrisman wrote: > > On Mac OS X 10.11. Upgrading via git pull trac develop and make from > somewhere in the 9.0 betas, I get a lot of good things, until: > > mkdir ../../../../library/tools/libs > > installing 'sysdata.rda' > > dyld: Library not loaded: > /Users/.../sage/local/lib/libopenblas_haswellp-r0.3.6.dylib > > Referenced from: /Users/.../sage/local/lib/R/lib/libR.dylib > > Reason: image not found > > /bin/bash: line 1: 24759 Doneecho > "tools:::sysdata2LazyLoadDB(\"./R/sysdata.rda\",\"../../../library/tools/R\")" > > 24760 Trace/BPT trap: 5 | R_DEFAULT_PACKAGES=NULL LC_ALL=C > R_ENABLE_JIT=0 TZ=UTC ../../../bin/R --vanilla --slave > > make[8]: *** [sysdata] Error 133 > > make[7]: *** [all] Error 2 > > make[6]: *** [R] Error 1 > > make[5]: *** [R] Error 1 > > make[4]: *** [R] Error 1 > > > > > Error building r-3.6.2.p0 > > > > > > real2m5.131s > > user0m47.882s > > sys 0m46.001s > > > > Error installing package r-3.6.2.p0 > > > > > $ ls local/lib/libopenblas[tab] > > libopenblas.0.dyliblibopenblas.dylib > libopenblas_haswellp-r0.3.9.dylib > > > So I'm not sure why it's asking for an older version of libopenblas. Full > R log at http://www.math.gordon.edu/~kcrisman/r-3.6.2.p0.log > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/e41416e6-3a4e-46c4-b8eb-93a6ae3e9a91o%40googlegroups.com.
Re: [sage-release] Re: Sage 9.2.beta1 released
On Wed, Jun 17, 2020 at 6:38 PM kcrisman wrote: > > > > >> >> mkdir ../../../../library/tools/libs >> >> installing 'sysdata.rda' >> >> dyld: Library not loaded: >> /Users/.../sage/local/lib/libopenblas_haswellp-r0.3.6.dylib >> >> Referenced from: /Users/.../sage/local/lib/R/lib/libR.dylib > > > For reference, doing > > $ rm -rf local/lib/R/ > > ended up solving the problem. But that seems like a bug - shouldn't the > previous R install properly be deleted, in our current paradigm of first > uninstalling (if I understand it correctly)? yes, it appears to be a bug (macOS-specific?). Probably the list of files installed by R spkg is incomplete, and so what's in the list is removed, but this one is not. You can see the file list in local/var/lib/sage/installed/ and check whether libR.dylib is there. HTH Dima > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-release+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-release/f50588d7-2094-498a-870c-b63716e105d3o%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/CAAWYfq0Qk1NziyquXC6bL5ajoFMaFPkAD07m6AMa%3DLE17gPGaA%40mail.gmail.com.
[sage-release] Re: Sage 9.2.beta1 released
> mkdir ../../../../library/tools/libs > > installing 'sysdata.rda' > > dyld: Library not loaded: > /Users/.../sage/local/lib/libopenblas_haswellp-r0.3.6.dylib > > Referenced from: /Users/.../sage/local/lib/R/lib/libR.dylib > > For reference, doing $ rm -rf local/lib/R/ ended up solving the problem. But that seems like a bug - shouldn't the previous R install properly be deleted, in our current paradigm of first uninstalling (if I understand it correctly)? -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/f50588d7-2094-498a-870c-b63716e105d3o%40googlegroups.com.
[sage-release] Re: Sage 9.1 released
> Binaries are now on their way to the mirrors! >> > > Thanks. What about the binaries for Windows? Some users are asking for > them on ask.sagemath and apparently, they are not yet on the mirrors. > Still not on the mirrors, or Github pages as https://www.sagemath.org/download.html implies they should be. Presumably they haven't been created yet. See also https://github.com/sagemath/website/issues/198 - which is simply a "current status" issue, not a "complaining" issue. Goodness knows just keeping Sage up-to-date is a big job, much less producing binaries. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/a9969806-0632-4114-aea5-ffee0619cea0o%40googlegroups.com.
[sage-release] Re: Sage 9.2.beta1 released
On Mac OS X 10.11. Upgrading via git pull trac develop and make from somewhere in the 9.0 betas, I get a lot of good things, until: mkdir ../../../../library/tools/libs installing 'sysdata.rda' dyld: Library not loaded: /Users/.../sage/local/lib/libopenblas_haswellp-r0.3.6.dylib Referenced from: /Users/.../sage/local/lib/R/lib/libR.dylib Reason: image not found /bin/bash: line 1: 24759 Doneecho "tools:::sysdata2LazyLoadDB(\"./R/sysdata.rda\",\"../../../library/tools/R\")" 24760 Trace/BPT trap: 5 | R_DEFAULT_PACKAGES=NULL LC_ALL=C R_ENABLE_JIT=0 TZ=UTC ../../../bin/R --vanilla --slave make[8]: *** [sysdata] Error 133 make[7]: *** [all] Error 2 make[6]: *** [R] Error 1 make[5]: *** [R] Error 1 make[4]: *** [R] Error 1 Error building r-3.6.2.p0 real2m5.131s user0m47.882s sys 0m46.001s Error installing package r-3.6.2.p0 $ ls local/lib/libopenblas[tab] libopenblas.0.dyliblibopenblas.dylib libopenblas_haswellp-r0.3.9.dylib So I'm not sure why it's asking for an older version of libopenblas. Full R log at http://www.math.gordon.edu/~kcrisman/r-3.6.2.p0.log -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/46fe726e-0808-4a2e-a1de-e1aa3b361289o%40googlegroups.com.
