Re: [sage-release] Sage 10.0.beta6 released

2023-03-28 Thread Matthias Köppe
The matrix failures come from the homebrew openblas update. 
See https://github.com/sagemath/sage/pull/35377

On Tuesday, March 28, 2023 at 5:52:45 PM UTC-7 list...@gmail.com wrote:

>
> FWIW, this is on Apple Silicon Macs ("M" series) with Homebrew up to date 
>  (make and make pytest and  make ptestlong), on macOS 11.7.5, macOS 12.6.4 
> and macOS 13.3.
> (Sorry for my hasty previous comment.)
>
> To make make work, make -j1 is usually needed.
>
> make ptestlong gives
>
> sage -t --long --warn-long … --random-seed=… 
> src/sage/calculus/interpolators.pyx  # 20 doctests failed
> sage -t --long --warn-long … --random-seed=… src/sage/calculus/riemann.pyx 
>  # 81 doctests failed
> sage -t --long --warn-long … --random-seed=… 
> src/sage/matrix/matrix_double_dense.pyx  # 11 doctests failed
> sage -t --long --warn-long … --random-seed=… 
> src/sage/matrix/matrix_space.py  # 2 doctests failed
> sage -t --long --warn-long … --random-seed=… src/sage/matrix/matrix2.pyx 
>  # 4 doctests failed
> (see https://github.com/scipy/scipy/issues/18208)
>
> sage -t --long --warn-long … --random-seed=… 
> src/sage/graphs/generators/families.py  # 2 doctests failed
> sage -t --long --warn-long … --random-seed=… 
> src/sage/graphs/graph_generators.py  # 1 doctest failed
> (see https://github.com/sagemath/sage/issues/35157)
>
> sage -t --long --warn-long … --random-seed=… 
> src/sage/modular/modform_hecketriangle/abstract_space.py  # 3 doctests 
> failed
> sage -t --long --warn-long … --random-seed=… 
> src/sage/modular/modform_hecketriangle/readme.py  # 1 doctest failed
> sage -t --long --warn-long … --random-seed=… 
> src/sage/modular/modform_hecketriangle/space.py  # 2 doctests failed
> (see https://github.com/sagemath/sage/issues/35273)
>
> Additionally:
>
> On macOS 11.7.5:
> sage -t --long --warn-long … --random-seed=… 
> src/sage/matrix/matrix_gf2e_dense.pyx  # 1 doctest failed
> (see https://github.com/sagemath/sage/issues/33212)
>
> On macOS 13.3:
> sage -t --long --warn-long … --random-seed=… 
> src/sage/structure/coerce_actions.pyx  # 3 doctests failed
> (perhaps due to the processor being too fast?)
>
> Guillermo
>
> On Sun, 26 Mar 2023 at 14:54, Volker Braun  wrote:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>> Also, in case you see a big scary man in the middle attack warning when 
>> you connect to github: Yes, github did rotate their ssh host key ;-)
>>
>> 82e02a10e90 (tag: 10.0.beta6, github/develop) Updated SageMath version to 
>> 10.0.beta6
>> 4452928a1a4 gh-35206: fixing some E502 (unnecessary backslash) in pyx 
>> files
>> 77a0c34f71e gh-35205: remove deprecated slicing semantics of polynomials
>> 4676d932f42 gh-35204: Remove directories leftover from improper shutdown 
>> so sage-cleaner won't kill random processes
>> e70da89c8cb gh-35203: sagemath-standard: Add dependencies 
>> `typing_extensions`, `importlib_resources`, `importlib_metadata`
>> 2540fe8f1f6 gh-35197: Fix bug with Set equality/inequality
>> e1cb236907a gh-35195: Workaround for an ecl race in maxima init
>> bd8ede6eb4d gh-35193: symbolics: add derivative operator
>> c140569c4e5 gh-35189: Add typing to tangent vectors
>> 88a9ab82d35 gh-35186: Various improvements to Weyl character rings
>> 249f67b60ea gh-35185: Bump actions/cache from 2 to 3
>> 110a3ccca4d gh-35184: Bump actions/github-script from 3.1.0 to 6.4.0
>> a3e8d990255 gh-35183: Bump codecov/codecov-action from 2 to 3
>> b2965a270b4 gh-35180: fix(docs): use double backquotes for a command
>> 002b464c35b gh-35177: Matplotlib 3.7.0 support
>> 1e777978d91 gh-35174: cleaning and enhancement to PolyDict
>> 85b1e026a2b gh-35173: Speedup of Poset characteristic polynomial
>> 81bacf5e853 gh-35170: Fix bug in is_eulerian
>> 883b99331ca gh-35169: CI: Add PDF doc building
>> 25a085387e4 gh-35165: activate W293 and E714 in pyx files
>> dc4930a5342 gh-35164: compute the matrix of an isogeny on a given 
>> n-torsion subgroup
>> e5cc348b117 gh-35163: Fix the documentation for the so matrix Lie algebra
>> af27c833462 gh-35162: Fix a slow doctest in matrix_integer_dense_hnf.py
>> 366d0cf3591 gh-35160: Move `filterwarnings` calls from `sage.all` to 
>> `sage.all__sagemath_repl`
>> 6d1467955bd gh-35159: update msolve to 0.4.9
>> f8e7176e3d7 gh-35156: Fix index out of range exception (#35031)
>> 525b34d3e76 gh-35155: Update the logo at README.md
>> a9624338824 gh-35153: `sage.matrix.operation_table`: Modularization and 
>> code style fixes
>> 670710771fe gh-35151: fix all pycodestyle E303 warnings in all folders c*
>> e97e5874d57 gh-35146: Equal hashes for non-isomorphic bipartite graphs 
>> with edge labels
>> 7bd91aab402 gh-35142: Fix broken link in README
>> a40b4883710 gh-35141: Revise the PR template
>> a21293e8801 gh-35140: Update normaliz to 3.10.0, update e_antic, 
>> pynormaliz
>> 4018a78fbe6 gh-35138: Allow skew tableaux to be hashed
>> 

Re: [sage-release] Sage 10.0.beta6 released

2023-03-28 Thread G. M.-S.
FWIW, this is on Apple Silicon Macs ("M" series) with Homebrew up to date
 (make and make pytest and  make ptestlong), on macOS 11.7.5, macOS 12.6.4
and macOS 13.3.
(Sorry for my hasty previous comment.)

To make make work, make -j1 is usually needed.

make ptestlong gives

sage -t --long --warn-long … --random-seed=…
src/sage/calculus/interpolators.pyx  # 20 doctests failed
sage -t --long --warn-long … --random-seed=… src/sage/calculus/riemann.pyx
 # 81 doctests failed
sage -t --long --warn-long … --random-seed=…
src/sage/matrix/matrix_double_dense.pyx  # 11 doctests failed
sage -t --long --warn-long … --random-seed=…
src/sage/matrix/matrix_space.py  # 2 doctests failed
sage -t --long --warn-long … --random-seed=… src/sage/matrix/matrix2.pyx  #
4 doctests failed
(see https://github.com/scipy/scipy/issues/18208)

sage -t --long --warn-long … --random-seed=…
src/sage/graphs/generators/families.py  # 2 doctests failed
sage -t --long --warn-long … --random-seed=…
src/sage/graphs/graph_generators.py  # 1 doctest failed
(see https://github.com/sagemath/sage/issues/35157)

sage -t --long --warn-long … --random-seed=…
src/sage/modular/modform_hecketriangle/abstract_space.py  # 3 doctests
failed
sage -t --long --warn-long … --random-seed=…
src/sage/modular/modform_hecketriangle/readme.py  # 1 doctest failed
sage -t --long --warn-long … --random-seed=…
src/sage/modular/modform_hecketriangle/space.py  # 2 doctests failed
(see https://github.com/sagemath/sage/issues/35273)

Additionally:

On macOS 11.7.5:
sage -t --long --warn-long … --random-seed=…
src/sage/matrix/matrix_gf2e_dense.pyx  # 1 doctest failed
(see https://github.com/sagemath/sage/issues/33212)

On macOS 13.3:
sage -t --long --warn-long … --random-seed=…
src/sage/structure/coerce_actions.pyx  # 3 doctests failed
(perhaps due to the processor being too fast?)

Guillermo

On Sun, 26 Mar 2023 at 14:54, Volker Braun  wrote:

> As always, you can get the latest beta version from the "develop" git
> branch. Alternatively, the self-contained source tarball is at
> http://www.sagemath.org/download-latest.html
>
> Also, in case you see a big scary man in the middle attack warning when
> you connect to github: Yes, github did rotate their ssh host key ;-)
>
> 82e02a10e90 (tag: 10.0.beta6, github/develop) Updated SageMath version to
> 10.0.beta6
> 4452928a1a4 gh-35206: fixing some E502 (unnecessary backslash) in pyx files
> 77a0c34f71e gh-35205: remove deprecated slicing semantics of polynomials
> 4676d932f42 gh-35204: Remove directories leftover from improper shutdown
> so sage-cleaner won't kill random processes
> e70da89c8cb gh-35203: sagemath-standard: Add dependencies
> `typing_extensions`, `importlib_resources`, `importlib_metadata`
> 2540fe8f1f6 gh-35197: Fix bug with Set equality/inequality
> e1cb236907a gh-35195: Workaround for an ecl race in maxima init
> bd8ede6eb4d gh-35193: symbolics: add derivative operator
> c140569c4e5 gh-35189: Add typing to tangent vectors
> 88a9ab82d35 gh-35186: Various improvements to Weyl character rings
> 249f67b60ea gh-35185: Bump actions/cache from 2 to 3
> 110a3ccca4d gh-35184: Bump actions/github-script from 3.1.0 to 6.4.0
> a3e8d990255 gh-35183: Bump codecov/codecov-action from 2 to 3
> b2965a270b4 gh-35180: fix(docs): use double backquotes for a command
> 002b464c35b gh-35177: Matplotlib 3.7.0 support
> 1e777978d91 gh-35174: cleaning and enhancement to PolyDict
> 85b1e026a2b gh-35173: Speedup of Poset characteristic polynomial
> 81bacf5e853 gh-35170: Fix bug in is_eulerian
> 883b99331ca gh-35169: CI: Add PDF doc building
> 25a085387e4 gh-35165: activate W293 and E714 in pyx files
> dc4930a5342 gh-35164: compute the matrix of an isogeny on a given
> n-torsion subgroup
> e5cc348b117 gh-35163: Fix the documentation for the so matrix Lie algebra
> af27c833462 gh-35162: Fix a slow doctest in matrix_integer_dense_hnf.py
> 366d0cf3591 gh-35160: Move `filterwarnings` calls from `sage.all` to
> `sage.all__sagemath_repl`
> 6d1467955bd gh-35159: update msolve to 0.4.9
> f8e7176e3d7 gh-35156: Fix index out of range exception (#35031)
> 525b34d3e76 gh-35155: Update the logo at README.md
> a9624338824 gh-35153: `sage.matrix.operation_table`: Modularization and
> code style fixes
> 670710771fe gh-35151: fix all pycodestyle E303 warnings in all folders c*
> e97e5874d57 gh-35146: Equal hashes for non-isomorphic bipartite graphs
> with edge labels
> 7bd91aab402 gh-35142: Fix broken link in README
> a40b4883710 gh-35141: Revise the PR template
> a21293e8801 gh-35140: Update normaliz to 3.10.0, update e_antic, pynormaliz
> 4018a78fbe6 gh-35138: Allow skew tableaux to be hashed
> b6b5c2cce14 gh-35136: `sage.{geometry,rings}`: More `# optional` tags in
> doctests
> 9e9842541bc gh-35135: `sage.geometry.integral_points`: Use generic impl if
> no `matrix_integer_dense`
> 63ab60df4a4 gh-35132: fix pep8 E303 in various folders (plot, quadratic
> forms, etc)
> e6bc06f274f gh-35131: PR for issue 32136: Add parameter 'induced' to
> 

[sage-release] Re: Sage 10.0.beta6 released

2023-03-28 Thread Emmanuel Charpentier
On Debian testing running on core i7 + 16 GB RAM, upgrading 10.0.beta4 to 
beta6 (with rebuilding sagelib, see above...), ptestlong gives the foursae 
permanent errors alreadu reported for the previous beta.

HTH,

Le dimanche 26 mars 2023 à 14:54:16 UTC+2, Volker Braun a écrit :

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
> Also, in case you see a big scary man in the middle attack warning when 
> you connect to github: Yes, github did rotate their ssh host key ;-)
>
>
> 82e02a10e90 (tag: 10.0.beta6, github/develop) Updated SageMath version to 
> 10.0.beta6
> 4452928a1a4 gh-35206: fixing some E502 (unnecessary backslash) in pyx files
> 77a0c34f71e gh-35205: remove deprecated slicing semantics of polynomials
> 4676d932f42 gh-35204: Remove directories leftover from improper shutdown 
> so sage-cleaner won't kill random processes
> e70da89c8cb gh-35203: sagemath-standard: Add dependencies 
> `typing_extensions`, `importlib_resources`, `importlib_metadata`
> 2540fe8f1f6 gh-35197: Fix bug with Set equality/inequality
> e1cb236907a gh-35195: Workaround for an ecl race in maxima init
> bd8ede6eb4d gh-35193: symbolics: add derivative operator
> c140569c4e5 gh-35189: Add typing to tangent vectors
> 88a9ab82d35 gh-35186: Various improvements to Weyl character rings
> 249f67b60ea gh-35185: Bump actions/cache from 2 to 3
> 110a3ccca4d gh-35184: Bump actions/github-script from 3.1.0 to 6.4.0
> a3e8d990255 gh-35183: Bump codecov/codecov-action from 2 to 3
> b2965a270b4 gh-35180: fix(docs): use double backquotes for a command
> 002b464c35b gh-35177: Matplotlib 3.7.0 support
> 1e777978d91 gh-35174: cleaning and enhancement to PolyDict
> 85b1e026a2b gh-35173: Speedup of Poset characteristic polynomial
> 81bacf5e853 gh-35170: Fix bug in is_eulerian
> 883b99331ca gh-35169: CI: Add PDF doc building
> 25a085387e4 gh-35165: activate W293 and E714 in pyx files
> dc4930a5342 gh-35164: compute the matrix of an isogeny on a given 
> n-torsion subgroup
> e5cc348b117 gh-35163: Fix the documentation for the so matrix Lie algebra
> af27c833462 gh-35162: Fix a slow doctest in matrix_integer_dense_hnf.py
> 366d0cf3591 gh-35160: Move `filterwarnings` calls from `sage.all` to 
> `sage.all__sagemath_repl`
> 6d1467955bd gh-35159: update msolve to 0.4.9
> f8e7176e3d7 gh-35156: Fix index out of range exception (#35031)
> 525b34d3e76 gh-35155: Update the logo at README.md
> a9624338824 gh-35153: `sage.matrix.operation_table`: Modularization and 
> code style fixes
> 670710771fe gh-35151: fix all pycodestyle E303 warnings in all folders c*
> e97e5874d57 gh-35146: Equal hashes for non-isomorphic bipartite graphs 
> with edge labels
> 7bd91aab402 gh-35142: Fix broken link in README
> a40b4883710 gh-35141: Revise the PR template
> a21293e8801 gh-35140: Update normaliz to 3.10.0, update e_antic, pynormaliz
> 4018a78fbe6 gh-35138: Allow skew tableaux to be hashed
> b6b5c2cce14 gh-35136: `sage.{geometry,rings}`: More `# optional` tags in 
> doctests
> 9e9842541bc gh-35135: `sage.geometry.integral_points`: Use generic impl if 
> no `matrix_integer_dense`
> 63ab60df4a4 gh-35132: fix pep8 E303 in various folders (plot, quadratic 
> forms, etc)
> e6bc06f274f gh-35131: PR for issue 32136: Add parameter 'induced' to 
> `connected_subgraphs_iterator`
> b80d04e4591 gh-35128: Fix French notation for Tableau plots
> 53362d1e69a gh-35127: Fix a very slow doctest in 
> `sage/data_structures/stream.py`
> 9955e921ee7 gh-35123: fixing most of pycodestyle E271
> b2e6ba78074 gh-35120: Add optional package cvxpy, update cylp, add CVXPY 
> MIP backend
> e6be37bbe59 gh-35118: `sage.env.sage_include_directories`: Don't use 
> `distutils` and `SAGE_LIB`
> 8c79facb5c8 gh-35117: fix pep E303 in modular/ and algebras/
> 06db831d50f gh-35115: Make the key polynomials know their degree
> 0d01c38713d gh-35114: libgap: Remove some GC hazards
> f18723da821 gh-35113: added check for invalid range in contour_plot and 
> derivatives
> 90f14dc52ba gh-35111: Partly fix conda ci and update python versions tested
> 80511e167b8 gh-35110: Meta-PR: Replace imports from sage.*.all for 
> namespace packages
> eaf63933d94 gh-35080: Use the Docker images published on ghcr.io without 
> 'docker' in the name
> ce41bee6d97 gh-35056: Make automatic codecov report less noisy
> c00e6c204b2 (tag: 10.0.beta5) Updated SageMath version to 10.0.beta5
>

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Re: [sage-release] Re: Sage 10.0.beta6 released

2023-03-28 Thread Emmanuel Charpentier
Ditto here.

Thanks again !

Le lundi 27 mars 2023 à 21:25:31 UTC+2, egourg...@gmail.com a écrit :

> Le lundi 27 mars 2023 à 17:06:35 UTC+2, Dima Pasechnik a écrit :
>
> make sagelib-clean sagelib-uninstall 
> make
>
>
> This solved the issue. 
> Thank you Dima!
>
> Eric. 
>  
>
>
> On Mon, 27 Mar 2023, 16:03 Eric Gourgoulhon,  wrote:
>
> Le lundi 27 mars 2023 à 17:00:12 UTC+2, Eric Gourgoulhon a écrit :
>
> Hi, 
>
> On Ubuntu 22.04 running on Intel Core i7-8665U @1.9 GHz + 32 GB RAM, 
> incremental parallel (-j8) build from Sage 10.0.beta4 failed while building 
> the documentation. 
> Running 
> make doc-clean doc-uninstall
> and then make again did not help. 
> The issue seems to be in sage.geometry.integral_points;
>
>
> This is the same error as reported by Emanuel, our messages being posted 
> at almost the same time.
>
>

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