Re: [sage-release] Re: Sage 10.3.beta1 released

['tsc...@ucdavis.edu' via sage-release]

As indicated on the e-antic PR, this prevents normaliz from working. So 
this is blocking a number of optional packages, and it would be great if 
this could be resolved quickly.

Best,
Travis


On Wednesday, December 13, 2023 at 3:44:20 AM UTC+9 vdelecroix wrote:

> e-antic is indeed not compatible (yet) with flint-3.0.0, see
> https://github.com/flatsurf/e-antic/issues/263
>
> On Tue, 12 Dec 2023 at 08:32, 'tsc...@ucdavis.edu' via sage-release
>  wrote:
> >
> > I am having an issue building e_antic that was not present for building 
> 10.2 from source. I've included the log file below. I first tried without 
> installing anything extra and then with a system libantic installation. 
> Both resulted in the same log file.
> >
> > Best,
> > Travis
> >
> > Using cached file /home/travis/sage-build/upstream/e-antic-1.3.0.tar.gz
> > e_antic-1.3.0
> > 
> > Setting up build directory for e_antic-1.3.0
> > Finished extraction
> > No patch files found in ../patches
> > 
> > Host system:
> > Linux tscrim 6.2.0-37-generic #38~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Thu 
> Nov 2 18:01:13 UTC 2 x86_64 x86_64 x86_64 GNU/Linux
> > 
> > C compiler: gcc
> > C compiler version:
> > Using built-in specs.
> > COLLECT_GCC=gcc
> > COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper
> > OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa
> > OFFLOAD_TARGET_DEFAULT=1
> > Target: x86_64-linux-gnu
> > Configured with: ../src/configure -v --with-pkgversion='Ubuntu 
> 11.4.0-1ubuntu1~22.04' 
> --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs 
> --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 
> --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 
> --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id 
> --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix 
> --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu 
> --enable-libstdcxx-debug --enable-libstdcxx-time=yes 
> --with-default-libstdcxx-abi=new --enable-gnu-unique-object 
> --disable-vtable-verify --enable-plugin --enable-default-pie 
> --with-system-zlib --enable-libphobos-checking=release 
> --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch 
> --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 
> --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic 
> --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr
>  
> --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu 
> --host=x86_64-linux-gnu --target=x86_64-linux-gnu 
> --with-build-config=bootstrap-lto-lean --enable-link-serialization=2
> > Thread model: posix
> > Supported LTO compression algorithms: zlib zstd
> > gcc version 11.4.0 (Ubuntu 11.4.0-1ubuntu1~22.04)
> > 
> > Package 'e_antic' is currently not installed
> > No legacy uninstaller found for 'e_antic'; nothing to do
> > Configuring e_antic-1.3.0
> > checking for a BSD-compatible install... /usr/bin/install -c
> > checking whether build environment is sane... yes
> > checking for a race-free mkdir -p... /usr/bin/mkdir -p
> > checking for gawk... gawk
> > checking whether make sets $(MAKE)... yes
> > checking whether make supports nested variables... yes
> > checking how to create a pax tar archive... gnutar
> > checking that generated files are newer than configure... done
> > configure: creating ./config.status
> > config.status: creating Makefile
> > === configuring in libeantic 
> (/home/travis/sage-build/local/var/tmp/sage/build/e_antic-1.3.0/src/libeantic)
> > configure: running /usr/bin/bash ./configure --disable-option-checking 
> '--prefix=/home/travis/sage-build/local' 
> '--libdir=/home/travis/sage-build/local/lib' '--disable-static' 
> '--disable-maintainer-mode' '--disable-dependency-tracking' 
> '--without-byexample' '--without-doc' '--without-benchmark' 
> '--without-pyeantic' --cache-file=/dev/null --srcdir=.
> > checking for a BSD-compatible install... /usr/bin/install -c
> > checking whether build environment is sane... yes
> > checking for a race-free mkdir -p... /usr/bin/mkdir -p
> > checking for gawk... gawk
> > checking whether make sets $(MAKE)... yes
> > checking whether make supports nested variables... yes
> > checking how to create a pax tar archive... gnutar
> > checking whether make supports nested variables... (cached) yes
> > checking build system type... x86_64-pc-linux-gnu
> > checking host system type... x86_64-pc-linux-gnu
> > checking how to print strings... printf
> > checking whether make supports the include directive... yes (GNU style)
> > checking for gcc... gcc
> > checking whether the C compiler works... yes
> > checking for C compiler default output 

Re: [sage-release] Re: Sage 10.3.beta1 released

[Vincent Delecroix]

e-antic is indeed not compatible (yet) with flint-3.0.0, see
https://github.com/flatsurf/e-antic/issues/263

On Tue, 12 Dec 2023 at 08:32, 'tsc...@ucdavis.edu' via sage-release
 wrote:
>
> I am having an issue building e_antic that was not present for building 10.2 
> from source. I've included the log file below. I first tried without 
> installing anything extra and then with a system libantic installation. Both 
> resulted in the same log file.
>
> Best,
> Travis
>
> Using cached file /home/travis/sage-build/upstream/e-antic-1.3.0.tar.gz
> e_antic-1.3.0
> 
> Setting up build directory for e_antic-1.3.0
> Finished extraction
> No patch files found in ../patches
> 
> Host system:
> Linux tscrim 6.2.0-37-generic #38~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Thu Nov  
> 2 18:01:13 UTC 2 x86_64 x86_64 x86_64 GNU/Linux
> 
> C compiler: gcc
> C compiler version:
> Using built-in specs.
> COLLECT_GCC=gcc
> COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper
> OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa
> OFFLOAD_TARGET_DEFAULT=1
> Target: x86_64-linux-gnu
> Configured with: ../src/configure -v --with-pkgversion='Ubuntu 
> 11.4.0-1ubuntu1~22.04' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs 
> --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr 
> --with-gcc-major-version-only --program-suffix=-11 
> --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id 
> --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix 
> --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu 
> --enable-libstdcxx-debug --enable-libstdcxx-time=yes 
> --with-default-libstdcxx-abi=new --enable-gnu-unique-object 
> --disable-vtable-verify --enable-plugin --enable-default-pie 
> --with-system-zlib --enable-libphobos-checking=release 
> --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch 
> --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 
> --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic 
> --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr
>  --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu 
> --host=x86_64-linux-gnu --target=x86_64-linux-gnu 
> --with-build-config=bootstrap-lto-lean --enable-link-serialization=2
> Thread model: posix
> Supported LTO compression algorithms: zlib zstd
> gcc version 11.4.0 (Ubuntu 11.4.0-1ubuntu1~22.04)
> 
> Package 'e_antic' is currently not installed
> No legacy uninstaller found for 'e_antic'; nothing to do
> Configuring e_antic-1.3.0
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a race-free mkdir -p... /usr/bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking whether make supports nested variables... yes
> checking how to create a pax tar archive... gnutar
> checking that generated files are newer than configure... done
> configure: creating ./config.status
> config.status: creating Makefile
> === configuring in libeantic 
> (/home/travis/sage-build/local/var/tmp/sage/build/e_antic-1.3.0/src/libeantic)
> configure: running /usr/bin/bash ./configure --disable-option-checking 
> '--prefix=/home/travis/sage-build/local'  
> '--libdir=/home/travis/sage-build/local/lib' '--disable-static' 
> '--disable-maintainer-mode' '--disable-dependency-tracking' 
> '--without-byexample' '--without-doc' '--without-benchmark' 
> '--without-pyeantic' --cache-file=/dev/null --srcdir=.
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a race-free mkdir -p... /usr/bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking whether make supports nested variables... yes
> checking how to create a pax tar archive... gnutar
> checking whether make supports nested variables... (cached) yes
> checking build system type... x86_64-pc-linux-gnu
> checking host system type... x86_64-pc-linux-gnu
> checking how to print strings... printf
> checking whether make supports the include directive... yes (GNU style)
> checking for gcc... gcc
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether the compiler supports GNU C... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to enable C11 features... none needed
> checking whether gcc understands -c and -o together... yes
> checking dependency 

Re: [sage-release] Sage 10.3.beta0 released

[David Coudert]

Issue resolved after upgrading the system to Fedora 39.
Thank you.
David.

> Le 9 déc. 2023 à 21:54, David Coudert  a écrit :
> 
> Does not help.
> I’ll wait for a system update and let you know.
> Best,
> David.
> 
>> Le 9 déc. 2023 à 21:20, Matthias Köppe > > a écrit :
>> 
>> Try if https://github.com/sagemath/sage/pull/36823 
>>  helps with this
>> 
>> On Saturday, December 9, 2023 at 8:52:54 AM UTC-8 david@gmail.com 
>>  wrote:
>> Hello,
>> 
>> I have a surprising and annoying issue on Fedora 35 with 10.3.beta0 after
>> make distclean sagelib-clean
>> make build
>> ./sage -i bliss tdlib benzene buckygen cryptominisat dot2tex glucose 
>> gap_packages mcqd plantri  csdp python_igraph
>> 
>> When I start sage in a console, I see some warnings:
>> 
>> gelati:/home/dcoudert/sage> ./sage
>> ┌┐
>> │ SageMath version 10.3.beta0, Release Date: 2023-12-05  │
>> │ Using Python 3.10.8. Type "help()" for help.   │
>> └┘
>> ┏┓
>> ┃ Warning: this is a prerelease version, and it may be unstable. ┃
>> ┗┛
>> /home/dcoudert/sage/local/var/lib/sage/venv-python3.10/lib64/python3.10/site-packages/prompt_toolkit/application/application.py:988:
>>  DeprecationWarning: There is no current event loop
>>   loop = asyncio.get_event_loop()
>> sage: G = graphs.PetersenGraph()
>> /home/dcoudert/sage/local/var/lib/sage/venv-python3.10/lib64/python3.10/site-packages/prompt_toolkit/application/application.py:988:
>>  DeprecationWarning: There is no current event loop
>>   loop = asyncio.get_event_loop()
>> sage: G
>> Petersen graph: Graph on 10 vertices
>> /home/dcoudert/sage/local/var/lib/sage/venv-python3.10/lib64/python3.10/site-packages/prompt_toolkit/application/application.py:988:
>>  DeprecationWarning: There is no current event loop
>>   loop = asyncio.get_event_loop()
>> sage: 
>> 
>> 
>> However, these warnings are not interfering with doctests. Running for 
>> instance `./sage -t src/sage/graphs/` works fine.
>> 
>> Anyway help to avoid these warnings is more than welcome.
>> 
>> Best,
>> David.
>> 
>> 
>> 
>> 
>>> Le 6 déc. 2023 à 20:37, John H Palmieri >> > a écrit :
>>> 
>> 
>>> Builds fine for me on OS X, both Intel and Apple Silicon. No new doctest 
>>> failures.
>>> 
>>> On Tuesday, December 5, 2023 at 4:26:09 PM UTC-8 Volker Braun wrote:
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html 
>>> 
>>> 
>>> 272582be9e0 (github/develop, tag: 10.3.beta0) Updated SageMath version to 
>>> 10.3.beta0
>>> 9b1e18ffc02  gh-36664: ruff auto-fix for C4 in modular
>>> 3253ed95cdb gh-36658: `sage.sat`: Update `# needs`
>>> b707b299324 gh-36657: `sage.tests`: Update `# needs`
>>> 34b6321efb2 gh-36655: `sage.misc.explain_pickle`: Docstring cosmetics
>>> c9e28a84924 gh-36654: More fixes for e221
>>> 0394ea33387 gh-36653: clean E702 etc in integer.pyx
>>> bf801b1edfb gh-36644: `sage.combinat.words`: Update `# needs`
>>> 5a22cce2510 gh-36643: `sage.combinat.species`: Update `# needs`
>>> 91c9fa67907 gh-36642: `sage.algebras`: Update `# needs`, modularization 
>>> fixes, doctest cosmetics
>>> ef9b2792302 gh-36638: return Weierstrass scaling factor in base field for 
>>> EllipticCurveIsogeny
>>> 2b9f3e0e4ff gh-36637: sums of elliptic-curve morphisms
>>> 3a9254d73ae gh-36630: Allow to specify output directory for generated 
>>> interpreters
>>> 69d03d36651 gh-36623: cylint cleanup in combinatorial polyhedra
>>> 7b3e208631f gh-36597: Replace relative imports by absolute ones in modules
>>> 779a502cd5e gh-36592: Add pull_from_function_field to curves
>>> 54dbcbf46a6 gh-36589: Replace relative imports by absolute ones in a few 
>>> packages
>>> 671f7d56ba0 gh-36588: Replace relative imports by absolute ones in rings
>>> caa10685ff2 gh-36584: implemented power of graph function under basic 
>>> methods
>>> 8801f6e24cd gh-36574: rename the backtrack algorithm of method 
>>> `longest_path` with deprecation
>>> 9014410efb7 gh-36572: Replace relative imports by absolute ones in 
>>> categories
>>> e86721e0b97 gh-36562: `pkgs/sage-{docbuild,setup,sws2rst}`: Migrate from 
>>> `setup.cfg` to `pyproject.toml`
>>> d67dba4740c gh-36505: `sage --tox -e coverage.py`
>>> a5107c61cf4 gh-36504: Functions for nice tree decomposition and its 
>>> labelling
>>> 8bcebb19169 gh-36457: check coprimality of moduli in CRT_basis()
>>> a6f2c461733 gh-36368: Laurent polynomials, Fitting ideals and 
>>> characteristic varieties
>>> d2b457895c4 gh-36223: src/sage/doctest/control.py: 

[sage-release] Re: Sage 10.3.beta1 released

[Eric Gourgoulhon]

Thanks for the release. 

On Ubuntu 22.04 running on Xeon E5-2623 + 16 GB RAM:
- parallel build (-j16) from a fresh git clone + pull develop, with system 
python (3.10.12): OK
- make ptestlong gave a single error:

sage -t --long --random-seed=676542016572831857751872562668780748 
src/sage/numerical/backends/logging_backend.py  # Killed due to abort

The test is passed when run standalone. 
The same error (maybe a race issue) has been reported previously for Sage 
9.6.beta2: 
https://groups.google.com/g/sage-release/c/vxYHQA6LUGw/m/0sfDdPnECAAJ
https://groups.google.com/g/sage-release/c/vxYHQA6LUGw/m/GXGFksByAQAJ

Eric. 

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[sage-release] Re: Sage 10.3.beta1 released

[Antonio Rojas]

e-antic doesn't support flint 3 yet

https://github.com/sagemath/sage/pull/35848#issuecomment-1841661819
https://github.com/flatsurf/e-antic/pull/264

El martes, 12 de diciembre de 2023 a las 8:32:16 UTC+1, tsc...@ucdavis.edu 
escribió:

I am having an issue building e_antic that was not present for building 
10.2 from source. I've included the log file below. I first tried without 
installing anything extra and then with a system libantic installation. 
Both resulted in the same log file.


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