Re: [sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Dima Pasechnik
On Sat, 5 Jun 2021, 21:51 Paul Masson,  wrote:

> Removed that directory under my user name and build still hangs at that
> line. Do I need to start from the beginning after removing the directory?
>

hmm, no. I see these hangs happen now and then.

I don't know how to debug this on macOS.



> On Saturday, June 5, 2021 at 1:26:44 PM UTC-7 Dima Pasechnik wrote:
>
>> typically these hangs mean something stale in ~/.sage/
>>
>> try moving it away and re-run make.
>>
>>
>> On Sat, 5 Jun 2021, 20:58 Paul Masson,  wrote:
>>
>>> Now having a problem with the documentation. The first run stopped at
>>> this point:
>>>
>>> [sage_docbuild-9.4.beta0] Installing collected packages: sage-docbuild
>>> [sage_docbuild-9.4.beta0]
>>> [sage_docbuild-9.4.beta0] Successfully installed sage-docbuild-9.4b0
>>> [sage_docbuild-9.4.beta0] Removed build tracker:
>>> '/private/var/folders/np/_r579ck92g1f9x1tzcvdhy5mgn/T/pip-req-tracker-l7mxw1p6'
>>> touch
>>> "/Users/Masson/Downloads/GitHub/sage/local/var/lib/sage/installed/sage_docbuild-9.4.beta0"
>>>
>>> Tried terminating the process and rerunning, but still hangs at this
>>> line. Tried "chmod 755" on the file and still hangs at this line. Any ideas
>>> anyone?
>>>
>>> On Saturday, June 5, 2021 at 6:29:51 AM UTC-7 Volker Braun wrote:
>>>
 Seems like extracting the xz achive fails

 On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:

> I haven't built Sage in some time, so perhaps something has changed
> recently of which I am unaware. After "make distclean" and "configure", my
> build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:
>
> Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
>
> http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
>
> [..]
> symmetrica-3.0.1
> 
> Setting up build directory for symmetrica-3.0.1
> Error: Unknown file type:
> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
> Finished extraction
> /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd:
> src: No such file or directory
> No patch files found in ../patches
> Error: There is no spkg-install script, no setup.py, and no configure
> script, so I do not know how to install
> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.
>
> Not making any sense to me, since all the files are there.
>
> On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git
>> branch. Alternatively, the self-contained source tarball is at
>> http://www.sagemath.org/download-latest.html
>>
>> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to
>> 9.4.beta0
>> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew
>> environments, deployment targets 10.14, 10.15, 11.1
>> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
>> 61b50f85a7 Trac #31581: Do not require base ring of quaternion
>> algebra to be a field
>> 068255ca05 Trac #31579: fix various lgtm suggestions
>> 46ce983ad7 Trac #31575: Remove full boost package
>> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the
>> formal group of an elliptic curve
>> 814efa4100 Trac #31571: Improve interface to plantri
>> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
>> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local
>> does not leak in on macOS
>> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
>> 9b484245c0 Trac #31547: Creating finite field using strings for
>> modulus does not cache
>> a80dc50086 Trac #31452: Problem with solution_dict in solve
>> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
>> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
>> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and
>> perpendicular_bisector
>> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
>> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
>> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
>> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly
>> overlapping cones
>> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular
>> sequences)
>> 78b00b0c86 Trac #31808: AA cannot convert real elements from a
>> quadratic field
>> 07db8a8b87 Trac #31545: deprecate or remove
>> InfiniteAbstractCombinatorialClass
>> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot
>> with color_by_label
>> a6c66a1d24 Trac #31540: Implement the alternating central extension
>> of the q-On

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Paul Masson
Removed that directory under my user name and build still hangs at that 
line. Do I need to start from the beginning after removing the directory?

On Saturday, June 5, 2021 at 1:26:44 PM UTC-7 Dima Pasechnik wrote:

> typically these hangs mean something stale in ~/.sage/
>
> try moving it away and re-run make.
>
>
> On Sat, 5 Jun 2021, 20:58 Paul Masson,  wrote:
>
>> Now having a problem with the documentation. The first run stopped at 
>> this point:
>>
>> [sage_docbuild-9.4.beta0] Installing collected packages: sage-docbuild
>> [sage_docbuild-9.4.beta0] 
>> [sage_docbuild-9.4.beta0] Successfully installed sage-docbuild-9.4b0
>> [sage_docbuild-9.4.beta0] Removed build tracker: 
>> '/private/var/folders/np/_r579ck92g1f9x1tzcvdhy5mgn/T/pip-req-tracker-l7mxw1p6'
>> touch 
>> "/Users/Masson/Downloads/GitHub/sage/local/var/lib/sage/installed/sage_docbuild-9.4.beta0"
>>
>> Tried terminating the process and rerunning, but still hangs at this 
>> line. Tried "chmod 755" on the file and still hangs at this line. Any ideas 
>> anyone?
>>
>> On Saturday, June 5, 2021 at 6:29:51 AM UTC-7 Volker Braun wrote:
>>
>>> Seems like extracting the xz achive fails
>>>
>>> On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:
>>>
 I haven't built Sage in some time, so perhaps something has changed 
 recently of which I am unaware. After "make distclean" and "configure", my 
 build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:

 Attempting to download package symmetrica-3.0.1.tar.xz from mirrors

 http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
 [..]
 symmetrica-3.0.1
 
 Setting up build directory for symmetrica-3.0.1
 Error: Unknown file type: 
 /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
 Finished extraction
 /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd: 
 src: No such file or directory
 No patch files found in ../patches
 Error: There is no spkg-install script, no setup.py, and no configure
 script, so I do not know how to install 
 /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.

 Not making any sense to me, since all the files are there.

 On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew 
> environments, deployment targets 10.14, 10.15, 11.1
> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra 
> to be a field
> 068255ca05 Trac #31579: fix various lgtm suggestions
> 46ce983ad7 Trac #31575: Remove full boost package
> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
> formal group of an elliptic curve
> 814efa4100 Trac #31571: Improve interface to plantri
> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local 
> does not leak in on macOS
> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
> 9b484245c0 Trac #31547: Creating finite field using strings for 
> modulus does not cache
> a80dc50086 Trac #31452: Problem with solution_dict in solve
> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
> perpendicular_bisector
> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
> overlapping cones
> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 78b00b0c86 Trac #31808: AA cannot convert real elements from a 
> quadratic field
> 07db8a8b87 Trac #31545: deprecate or remove 
> InfiniteAbstractCombinatorialClass
> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot 
> with color_by_label
> a6c66a1d24 Trac #31540: Implement the alternating central extension of 
> the q-Onsager algebra
> 87d5c86cd2 Trac #31532: GH Actions: Restore test for 
> optional/experimental packages on macOS platforms
> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
> e07c1ef197 Tra

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Dima Pasechnik
typically these hangs mean something stale in ~/.sage/

try moving it away and re-run make.


On Sat, 5 Jun 2021, 20:58 Paul Masson,  wrote:

> Now having a problem with the documentation. The first run stopped at this
> point:
>
> [sage_docbuild-9.4.beta0] Installing collected packages: sage-docbuild
> [sage_docbuild-9.4.beta0]
> [sage_docbuild-9.4.beta0] Successfully installed sage-docbuild-9.4b0
> [sage_docbuild-9.4.beta0] Removed build tracker:
> '/private/var/folders/np/_r579ck92g1f9x1tzcvdhy5mgn/T/pip-req-tracker-l7mxw1p6'
> touch
> "/Users/Masson/Downloads/GitHub/sage/local/var/lib/sage/installed/sage_docbuild-9.4.beta0"
>
> Tried terminating the process and rerunning, but still hangs at this line.
> Tried "chmod 755" on the file and still hangs at this line. Any ideas
> anyone?
>
> On Saturday, June 5, 2021 at 6:29:51 AM UTC-7 Volker Braun wrote:
>
>> Seems like extracting the xz achive fails
>>
>> On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:
>>
>>> I haven't built Sage in some time, so perhaps something has changed
>>> recently of which I am unaware. After "make distclean" and "configure", my
>>> build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:
>>>
>>> Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
>>>
>>> http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
>>> [..]
>>> symmetrica-3.0.1
>>> 
>>> Setting up build directory for symmetrica-3.0.1
>>> Error: Unknown file type:
>>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
>>> Finished extraction
>>> /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd:
>>> src: No such file or directory
>>> No patch files found in ../patches
>>> Error: There is no spkg-install script, no setup.py, and no configure
>>> script, so I do not know how to install
>>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.
>>>
>>> Not making any sense to me, since all the files are there.
>>>
>>> On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:
>>>
 As always, you can get the latest beta version from the "develop" git
 branch. Alternatively, the self-contained source tarball is at
 http://www.sagemath.org/download-latest.html

 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to
 9.4.beta0
 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew
 environments, deployment targets 10.14, 10.15, 11.1
 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra
 to be a field
 068255ca05 Trac #31579: fix various lgtm suggestions
 46ce983ad7 Trac #31575: Remove full boost package
 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the
 formal group of an elliptic curve
 814efa4100 Trac #31571: Improve interface to plantri
 cc3ff1c94b Trac #31570: iterator for maximal chains in poset
 fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does
 not leak in on macOS
 fcc9af582f Trac #31561: some details in cluster_seed and fqsym
 9b484245c0 Trac #31547: Creating finite field using strings for modulus
 does not cache
 a80dc50086 Trac #31452: Problem with solution_dict in solve
 9203633b9b Trac #31436: Provide alternate layout for the cube graph
 9addf207d9 Trac #30211: Characteristic Classes: Sequences
 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and
 perpendicular_bisector
 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
 cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly
 overlapping cones
 12831dd5b0 Trac #21295: recognizable series (a base for k-regular
 sequences)
 78b00b0c86 Trac #31808: AA cannot convert real elements from a
 quadratic field
 07db8a8b87 Trac #31545: deprecate or remove
 InfiniteAbstractCombinatorialClass
 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with
 color_by_label
 a6c66a1d24 Trac #31540: Implement the alternating central extension of
 the q-Onsager algebra
 87d5c86cd2 Trac #31532: GH Actions: Restore test for
 optional/experimental packages on macOS platforms
 aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
 e07c1ef197 Trac #31516: Update arb to 2.19.0
 7af69c5116 Trac #31514: number_field_elements_from_algebraics with
 complex embeddings
 f2c8b34947 Trac #31499: Check OpenMP at configuration
 ba189b2319 Trac #31469: Galois groups for finite fields
 701d36be1e Trac #31427: Improve .dockerignore
 3d738182cd Trac #31384: cython_aliases: Do n

[sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Paul Masson
Now having a problem with the documentation. The first run stopped at this 
point:

[sage_docbuild-9.4.beta0] Installing collected packages: sage-docbuild
[sage_docbuild-9.4.beta0] 
[sage_docbuild-9.4.beta0] Successfully installed sage-docbuild-9.4b0
[sage_docbuild-9.4.beta0] Removed build tracker: 
'/private/var/folders/np/_r579ck92g1f9x1tzcvdhy5mgn/T/pip-req-tracker-l7mxw1p6'
touch 
"/Users/Masson/Downloads/GitHub/sage/local/var/lib/sage/installed/sage_docbuild-9.4.beta0"

Tried terminating the process and rerunning, but still hangs at this line. 
Tried "chmod 755" on the file and still hangs at this line. Any ideas 
anyone?

On Saturday, June 5, 2021 at 6:29:51 AM UTC-7 Volker Braun wrote:

> Seems like extracting the xz achive fails
>
> On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:
>
>> I haven't built Sage in some time, so perhaps something has changed 
>> recently of which I am unaware. After "make distclean" and "configure", my 
>> build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:
>>
>> Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
>> http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
>> [..]
>> symmetrica-3.0.1
>> 
>> Setting up build directory for symmetrica-3.0.1
>> Error: Unknown file type: 
>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
>> Finished extraction
>> /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd: 
>> src: No such file or directory
>> No patch files found in ../patches
>> Error: There is no spkg-install script, no setup.py, and no configure
>> script, so I do not know how to install 
>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.
>>
>> Not making any sense to me, since all the files are there.
>>
>> On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:
>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html 
>>>
>>> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
>>> 9.4.beta0
>>> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew 
>>> environments, deployment targets 10.14, 10.15, 11.1
>>> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
>>> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra 
>>> to be a field
>>> 068255ca05 Trac #31579: fix various lgtm suggestions
>>> 46ce983ad7 Trac #31575: Remove full boost package
>>> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
>>> formal group of an elliptic curve
>>> 814efa4100 Trac #31571: Improve interface to plantri
>>> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
>>> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
>>> not leak in on macOS
>>> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
>>> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
>>> does not cache
>>> a80dc50086 Trac #31452: Problem with solution_dict in solve
>>> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
>>> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
>>> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
>>> perpendicular_bisector
>>> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
>>> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
>>> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
>>> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
>>> overlapping cones
>>> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
>>> sequences)
>>> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
>>> field
>>> 07db8a8b87 Trac #31545: deprecate or remove 
>>> InfiniteAbstractCombinatorialClass
>>> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
>>> color_by_label
>>> a6c66a1d24 Trac #31540: Implement the alternating central extension of 
>>> the q-Onsager algebra
>>> 87d5c86cd2 Trac #31532: GH Actions: Restore test for 
>>> optional/experimental packages on macOS platforms
>>> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
>>> e07c1ef197 Trac #31516: Update arb to 2.19.0
>>> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with 
>>> complex embeddings
>>> f2c8b34947 Trac #31499: Check OpenMP at configuration
>>> ba189b2319 Trac #31469: Galois groups for finite fields
>>> 701d36be1e Trac #31427: Improve .dockerignore
>>> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
>>> libraries is not known to pkgconfig
>>> 21274d870a Trac #31345: Improve Selmer Group method for number fields
>>> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
>>> "ra

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Samuel Lelièvre
Paul Masson:
>
> Installed xz using Homebrew. Appears to have done the trick. Thanks Volker.

https://trac.sagemath.org/ticket/31915

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[sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Paul Masson
Installed xz using Homebrew. Appears to have done the trick. Thanks Volker.

On Saturday, June 5, 2021 at 6:29:51 AM UTC-7 Volker Braun wrote:

> Seems like extracting the xz achive fails
>
> On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:
>
>> I haven't built Sage in some time, so perhaps something has changed 
>> recently of which I am unaware. After "make distclean" and "configure", my 
>> build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:
>>
>> Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
>> http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
>> [..]
>> symmetrica-3.0.1
>> 
>> Setting up build directory for symmetrica-3.0.1
>> Error: Unknown file type: 
>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
>> Finished extraction
>> /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd: 
>> src: No such file or directory
>> No patch files found in ../patches
>> Error: There is no spkg-install script, no setup.py, and no configure
>> script, so I do not know how to install 
>> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.
>>
>> Not making any sense to me, since all the files are there.
>>
>> On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:
>>
>>> As always, you can get the latest beta version from the "develop" git 
>>> branch. Alternatively, the self-contained source tarball is at 
>>> http://www.sagemath.org/download-latest.html 
>>>
>>> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
>>> 9.4.beta0
>>> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew 
>>> environments, deployment targets 10.14, 10.15, 11.1
>>> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
>>> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra 
>>> to be a field
>>> 068255ca05 Trac #31579: fix various lgtm suggestions
>>> 46ce983ad7 Trac #31575: Remove full boost package
>>> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
>>> formal group of an elliptic curve
>>> 814efa4100 Trac #31571: Improve interface to plantri
>>> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
>>> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
>>> not leak in on macOS
>>> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
>>> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
>>> does not cache
>>> a80dc50086 Trac #31452: Problem with solution_dict in solve
>>> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
>>> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
>>> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
>>> perpendicular_bisector
>>> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
>>> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
>>> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
>>> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
>>> overlapping cones
>>> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
>>> sequences)
>>> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
>>> field
>>> 07db8a8b87 Trac #31545: deprecate or remove 
>>> InfiniteAbstractCombinatorialClass
>>> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
>>> color_by_label
>>> a6c66a1d24 Trac #31540: Implement the alternating central extension of 
>>> the q-Onsager algebra
>>> 87d5c86cd2 Trac #31532: GH Actions: Restore test for 
>>> optional/experimental packages on macOS platforms
>>> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
>>> e07c1ef197 Trac #31516: Update arb to 2.19.0
>>> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with 
>>> complex embeddings
>>> f2c8b34947 Trac #31499: Check OpenMP at configuration
>>> ba189b2319 Trac #31469: Galois groups for finite fields
>>> 701d36be1e Trac #31427: Improve .dockerignore
>>> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
>>> libraries is not known to pkgconfig
>>> 21274d870a Trac #31345: Improve Selmer Group method for number fields
>>> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
>>> "random_element" to LPDictionary, InteractiveLPProblemStandardForm
>>> 9665ac4990 Trac #31179: Add package ipympl - Makes interactive features 
>>> of matplotlib available also in JupyterLab
>>> 6d05b6bf8c Trac #31108: Relaxed p-adics
>>> 08eadb587f Trac #31103: sage.numerical.backends: Replace use of 
>>> TestSuite by pytest
>>> a2ca61b1ac Trac #30861: Add more homebrew system package information, 
>>> including packages without spkg-configure.m4
>>> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support
>>> dce94e3121 Trac #30311: Immutability of

[sage-release] Re: Sage 9.4.beta0 released

2021-06-05 Thread Volker Braun
Seems like extracting the xz achive fails

On Friday, June 4, 2021 at 8:40:50 PM UTC+2 Paul Masson wrote:

> I haven't built Sage in some time, so perhaps something has changed 
> recently of which I am unaware. After "make distclean" and "configure", my 
> build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:
>
> Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
> http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
> [..]
> symmetrica-3.0.1
> 
> Setting up build directory for symmetrica-3.0.1
> Error: Unknown file type: 
> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
> Finished extraction
> /Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd: 
> src: No such file or directory
> No patch files found in ../patches
> Error: There is no spkg-install script, no setup.py, and no configure
> script, so I do not know how to install 
> /Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.
>
> Not making any sense to me, since all the files are there.
>
> On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:
>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html 
>>
>> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
>> 9.4.beta0
>> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew environments, 
>> deployment targets 10.14, 10.15, 11.1
>> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
>> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra to 
>> be a field
>> 068255ca05 Trac #31579: fix various lgtm suggestions
>> 46ce983ad7 Trac #31575: Remove full boost package
>> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
>> formal group of an elliptic curve
>> 814efa4100 Trac #31571: Improve interface to plantri
>> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
>> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
>> not leak in on macOS
>> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
>> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
>> does not cache
>> a80dc50086 Trac #31452: Problem with solution_dict in solve
>> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
>> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
>> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
>> perpendicular_bisector
>> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
>> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
>> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
>> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
>> overlapping cones
>> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
>> sequences)
>> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
>> field
>> 07db8a8b87 Trac #31545: deprecate or remove 
>> InfiniteAbstractCombinatorialClass
>> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
>> color_by_label
>> a6c66a1d24 Trac #31540: Implement the alternating central extension of 
>> the q-Onsager algebra
>> 87d5c86cd2 Trac #31532: GH Actions: Restore test for 
>> optional/experimental packages on macOS platforms
>> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
>> e07c1ef197 Trac #31516: Update arb to 2.19.0
>> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with 
>> complex embeddings
>> f2c8b34947 Trac #31499: Check OpenMP at configuration
>> ba189b2319 Trac #31469: Galois groups for finite fields
>> 701d36be1e Trac #31427: Improve .dockerignore
>> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
>> libraries is not known to pkgconfig
>> 21274d870a Trac #31345: Improve Selmer Group method for number fields
>> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
>> "random_element" to LPDictionary, InteractiveLPProblemStandardForm
>> 9665ac4990 Trac #31179: Add package ipympl - Makes interactive features 
>> of matplotlib available also in JupyterLab
>> 6d05b6bf8c Trac #31108: Relaxed p-adics
>> 08eadb587f Trac #31103: sage.numerical.backends: Replace use of TestSuite 
>> by pytest
>> a2ca61b1ac Trac #30861: Add more homebrew system package information, 
>> including packages without spkg-configure.m4
>> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support
>> dce94e3121 Trac #30311: Immutability of Scalar Fields II
>> eed9fe4be8 Trac #30213: tox.ini: Add scientificlinux
>> 8cab4cd2e2 Trac #29972: Make stats doctests ready for random seeds
>> 05c2ecadc5 Trac #29703: Upgrade gcc to 10.3 (latest 10.x)
>> 7ee6218134 Trac #29013: Add con

[sage-release] Re: Sage 9.4.beta0 released

2021-06-04 Thread Paul Masson
I haven't built Sage in some time, so perhaps something has changed 
recently of which I am unaware. After "make distclean" and "configure", my 
build on MacOS 10.15.7 is stopping at symmetrica. Here is the log:

Attempting to download package symmetrica-3.0.1.tar.xz from mirrors
http://files.sagemath.org/spkg/upstream/symmetrica/symmetrica-3.0.1.tar.xz
[..]
symmetrica-3.0.1

Setting up build directory for symmetrica-3.0.1
Error: Unknown file type: 
/Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz
Finished extraction
/Users/Masson/Downloads/GitHub/sage/build/bin/sage-spkg: line 488: cd: src: 
No such file or directory
No patch files found in ../patches
Error: There is no spkg-install script, no setup.py, and no configure
script, so I do not know how to install 
/Users/Masson/Downloads/GitHub/sage/upstream/symmetrica-3.0.1.tar.xz.

Not making any sense to me, since all the files are there.

On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew environments, 
> deployment targets 10.14, 10.15, 11.1
> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra to 
> be a field
> 068255ca05 Trac #31579: fix various lgtm suggestions
> 46ce983ad7 Trac #31575: Remove full boost package
> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
> formal group of an elliptic curve
> 814efa4100 Trac #31571: Improve interface to plantri
> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
> not leak in on macOS
> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
> does not cache
> a80dc50086 Trac #31452: Problem with solution_dict in solve
> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
> perpendicular_bisector
> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
> overlapping cones
> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
> field
> 07db8a8b87 Trac #31545: deprecate or remove 
> InfiniteAbstractCombinatorialClass
> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
> color_by_label
> a6c66a1d24 Trac #31540: Implement the alternating central extension of the 
> q-Onsager algebra
> 87d5c86cd2 Trac #31532: GH Actions: Restore test for optional/experimental 
> packages on macOS platforms
> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
> e07c1ef197 Trac #31516: Update arb to 2.19.0
> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with complex 
> embeddings
> f2c8b34947 Trac #31499: Check OpenMP at configuration
> ba189b2319 Trac #31469: Galois groups for finite fields
> 701d36be1e Trac #31427: Improve .dockerignore
> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
> libraries is not known to pkgconfig
> 21274d870a Trac #31345: Improve Selmer Group method for number fields
> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
> "random_element" to LPDictionary, InteractiveLPProblemStandardForm
> 9665ac4990 Trac #31179: Add package ipympl - Makes interactive features of 
> matplotlib available also in JupyterLab
> 6d05b6bf8c Trac #31108: Relaxed p-adics
> 08eadb587f Trac #31103: sage.numerical.backends: Replace use of TestSuite 
> by pytest
> a2ca61b1ac Trac #30861: Add more homebrew system package information, 
> including packages without spkg-configure.m4
> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support
> dce94e3121 Trac #30311: Immutability of Scalar Fields II
> eed9fe4be8 Trac #30213: tox.ini: Add scientificlinux
> 8cab4cd2e2 Trac #29972: Make stats doctests ready for random seeds
> 05c2ecadc5 Trac #29703: Upgrade gcc to 10.3 (latest 10.x)
> 7ee6218134 Trac #29013: Add configure option --with-sage-venv=SAGE_VENV to 
> create venv there instead of in SAGE_LOCAL
> 89134ebdbc Trac #29009: Error using mpmath (python 3 version)
> b15fe7517b Trac #27957: AG codes and decoders
> b47d2ad084 Trac 

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-30 Thread Samuel Lelièvre
2021-05-27 14:43 UTC, Dima Pasechnik:
>
> On Thu, 27 May 2021, 15:34 Clemens Heuberger,  
> wrote:
>>
>> Also on Ubuntu 18.04 (without any optional packages apart ccache installed), 
>> I
>> have the failing doctest with graph.py (two out of three runs) and 
>> consistently
>>
>> $ ./sage -t --long --random-seed=0 src/sage/misc/package.py
>> Running doctests with ID 2021-05-27-16-31-10-59754af4.
>> Using --optional=build,ccache,debian,dochtml,pip,sage,sage_spkg
>> Doctesting 1 file.
>> sage -t --long --warn-long 42.6 --random-seed=0 src/sage/misc/package.py
>> **
>> File "src/sage/misc/package.py", line 359, in 
>> sage.misc.package.installed_packages
>> Failed example:
>>  installed_packages()['sage_conf']  # optional - build
>> Expected:
>>  'none'
>> Got:
>>  '9.4.beta0'
>
> this is fixed in a ticket I reviewed today.

For reference:

- Sage Trac ticket 31825: Failure when testing sage_conf version
  https://trac.sagemath.org/ticket/31825

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[sage-release] Re: Sage 9.4.beta0 released

2021-05-28 Thread Emmanuel Charpentier


FWIWn on Debian testing running on core i7 + 16 GB RAM, after upgrading 
from 9.3 to 9.4.beta0, ptestlong gives me the same results (one transient 
timeout and two gap-related permanent failures) as before, plus one more 
transient failure on src/sage/graphs/graph.py :

sage -t --long --warn-long 228.8 --random-seed=0 src/sage/graphs/graph.py
**
File "src/sage/graphs/graph.py", line 2713, in 
sage.graphs.graph.Graph.is_edge_transitive
Failed example:
C.is_edge_transitive()
Exception raised:
Traceback (most recent call last):
  File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/doctest/forker.py", 
line 714, in _run
self.compile_and_execute(example, compiler, test.globs)
  File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/doctest/forker.py", 
line 1133, in compile_and_execute
exec(compiled, globs)
  File "", line 1, 
in 
C.is_edge_transitive()
  File 
"/usr/local/sage-9/local/lib/python3.9/site-packages/sage/graphs/graph.py", 
line 2731, in is_edge_transitive
return libgap(A).OrbitLength(e, libgap.OnSets) == self.size()
  File "sage/libs/gap/element.pyx", line 2677, in 
sage.libs.gap.element.GapElement_MethodProxy.__call__ 
(build/cythonized/sage/libs/gap/element.c:20775)
return GapElement_Function.__call__(self, * ([self.first_argument] + 
list(args)))
  File "sage/libs/gap/element.pyx", line 2525, in 
sage.libs.gap.element.GapElement_Function.__call__ 
(build/cythonized/sage/libs/gap/element.c:19779)
sig_on()
sage.libs.gap.util.GAPError: Error, OnSets:  must be a set (not a 
immutable non-strictly-sorted plain list of cyclotomics)
**
1 item had failures:
   1 of   9 in sage.graphs.graph.Graph.is_edge_transitive
[1216 tests, 1 failure, 75.95 s]

However, this is transient :

harpent@zen-book-flip:/usr/local/sage-9$ sage -t --long --warn-long 228.8 
--random-seed=0 src/sage/graphs/graph.py  # 1 doctest failed
Running doctests with ID 2021-05-28-13-24-34-ceab9ba0.
Git branch: develop
Using 
--optional=build,debian,dochtml,dot2tex,fricas,gap_jupyter,gap_packages,kenzo,libsemigroups,pip,pysingular,saclib,sage,sage_spkg,singular_jupyter
Doctesting 1 file.
sage -t --long --warn-long 228.8 --random-seed=0 src/sage/graphs/graph.py
[1216 tests, 16.62 s]
--
All tests passed!
--
Total time for all tests: 16.8 seconds
cpu time: 15.2 seconds
cumulative wall time: 16.6 seconds
Pytest is not installed, skip checking tests that rely on it.

This error being transient is more cause for questions than for 
reassurance, IMHO…

HTH,
​
Le mercredi 26 mai 2021 à 23:13:19 UTC+2, Volker Braun a écrit :

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew environments, 
> deployment targets 10.14, 10.15, 11.1
> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra to 
> be a field
> 068255ca05 Trac #31579: fix various lgtm suggestions
> 46ce983ad7 Trac #31575: Remove full boost package
> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
> formal group of an elliptic curve
> 814efa4100 Trac #31571: Improve interface to plantri
> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
> not leak in on macOS
> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
> does not cache
> a80dc50086 Trac #31452: Problem with solution_dict in solve
> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
> perpendicular_bisector
> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
> overlapping cones
> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
> field
> 07db8a8b87 Trac #31545: deprecate or remove 
> InfiniteAbstractCombinatorialClass
> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
> color_by_label
> a6c66a1d24 Trac #31540:

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Kwankyu Lee
With this release, the command

sage -docbuild all pdf

stops with the failure below. How about others?

Building it/a_tour_of_sage.

[a_tour_of] building [latex]: all documents
[a_tour_of] Merging environment/index files...
[a_tour_of] ... done (0 todos, 1 index, 0 citations, 0 modules)
...
(/usr/local/texlive/2021/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/local/texlive/2021/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/local/texlive/2021/texmf-dist/tex/generic/gettitlestring/gettitlestring.s
ty)) (/usr/local/texlive/2021/texmf-dist/tex/latex/psnfss/t1phv.fd)

*! Package inputenc Error: Unicode character リ (U+30EA)*
*(inputenc)not set up for use with LaTeX.*

See the inputenc package documentation for explanation.
Type  H   for immediate help.
 ...  
  
l.304 \sphinxmaketitle
  
? 
! Emergency stop.
 ...  
  
l.304 \sphinxmaketitle
  
!  ==> Fatal error occurred, no output PDF file produced!
Transcript written on a_tour_of_sage.log.
Latexmk: Examining 'a_tour_of_sage.log'
=== TeX engine is 'pdfTeX'
Latexmk: Index file 'a_tour_of_sage.idx' was written
Latexmk: Summary of warnings from last run of *latex:
  =Latex reported missing or unavailable character(s).
=See log file for details.
Latexmk: Errors, so I did not complete making targets
...


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[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Volker Braun
On Thursday, May 27, 2021 at 11:46:37 PM UTC+2 matthia...@gmail.com wrote:

> Thanks, Volker, for preparing the new beta. When you have a moment, could 
> you react to the discussion regarding the 9.4 release cycle over in 
> sage-devel?
>

Sounds good to me! Shorter release cycles are always better...
 

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[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Matthias Köppe
On Wednesday, May 26, 2021 at 2:13:19 PM UTC-7 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
>

Thanks, Volker, for preparing the new beta. When you have a moment, could 
you react to the discussion regarding the 9.4 release cycle over in 
sage-devel?


All: Here are some comments:

> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 05c2ecadc5 Trac #29703: Upgrade gcc to 10.3 (latest 10.x)

As a result of these tickets, on macOS with homebrew, it should no longer 
be necessary to pin gcc to version 10 now. Likely a "make distclean" to 
trigger a full rebuild will be necessary after switching to the latest 
toolchain.

> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support

Unfortunately, this ticket contained a bad change to sage-bootstrap-python.
If you are on a system with python 3.6, you might need to merge 
https://trac.sagemath.org/ticket/31860, which reverts this change.


>

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[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Volker Braun
The "sage.libs.gap.util.GAPError: Error, OnSets:  must be a set (not a 
immutable non-strictly-sorted plain list of cyclotomics)" is a known random 
failure, its pretty easy to repro by running the test in a loop. I made 
https://trac.sagemath.org/ticket/31848 for it.


On Thursday, May 27, 2021 at 2:44:10 PM UTC+2 Sébastien Labbé wrote:

> On Ubuntu 18.04, testing with various optional and external packages, I 
> obtain:
>
> --
> sage -t --long --warn-long 77.6 --random-seed=0 
> src/sage/databases/oeis.py  # 3 doctests failed
> sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py  
> # 1 doctest failed
> sage -t --long --warn-long 77.6 --random-seed=0 
> src/sage/symbolic/integration/external.py  # 1 doctest failed
> sage -t --long --warn-long 77.6 --random-seed=0 src/sage/tests/cmdline.py  
> # 1 doctest failed
> --
> External software detected for doctesting: 
> ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc
>
> Rerunning failed test, the issue with graph.py does not show again:
>
> --
> sage -t --long --warn-long 102.7 --random-seed=0 
> src/sage/databases/oeis.py  # 3 doctests failed
> sage -t --long --warn-long 102.7 --random-seed=0 
> src/sage/symbolic/integration/external.py  # 1 doctest failed
> sage -t --long --warn-long 102.7 --random-seed=0 
> src/sage/tests/cmdline.py  # 1 doctest failed
> --
> External software detected for doctesting: internet,pandoc
>
>
> The issue with graph.py is related to Gap, see below:
>
>
> sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py
> **
> File "src/sage/graphs/graph.py", line 2713, in 
> sage.graphs.graph.Graph.is_edge_transitive
> Failed example:
> C.is_edge_transitive()
> Exception raised:
> Traceback (most recent call last):
>   File 
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
>  
> line 714, in _run
> self.compile_and_execute(example, compiler, test.globs)
>   File 
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
>  
> line 1133, in compile_and_execute
> exec(compiled, globs)
>   File "", line 
> 1, in 
> C.is_edge_transitive()
>   File 
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/graphs/graph.py",
>  
> line 2731, in is_edge_transitive
> return libgap(A).OrbitLength(e, libgap.OnSets) == self.size()
>   File "sage/libs/gap/element.pyx", line 2677, in 
> sage.libs.gap.element.GapElement_MethodProxy.__call__ 
> (build/cythonized/sage/libs/gap/element.c:20776)
> return GapElement_Function.__call__(self, * ([self.first_argument] 
> + list(args)))
>   File "sage/libs/gap/element.pyx", line 2525, in 
> sage.libs.gap.element.GapElement_Function.__call__ 
> (build/cythonized/sage/libs/gap/element.c:19780)
> sig_on()
> sage.libs.gap.util.GAPError: Error, OnSets:  must be a set (not a 
> immutable non-strictly-sorted plain list of cyclotomics)
> **
> 1 item had failures:
>1 of   9 in sage.graphs.graph.Graph.is_edge_transitive
> 2 mcqd tests not run
> 2 not tested tests not run
> 13 python_igraph tests not run
> 0 tests not run because we ran out of time
> [1216 tests, 1 failure, 46.77 s]
>
>
>
> The other failures are copied below (I am not able to see the problem with 
> the first one):
>
>
> sage -t --long --warn-long 102.7 --random-seed=0 src/sage/databases/oeis.py
> **
> File "src/sage/databases/oeis.py", line 48, in sage.databases.oeis
> Failed example:
> c.examples()  # optional -- internet
> Expected:
> 0: Pi = 3.1415926535897932384...
> 1:= 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
> 2:= [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...]
> Got:
> 0: Pi = 3.1415926535897932384...
> 1:= 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
> 2:= [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...].
> **
> File "src/sage/databases/oeis.py", line 53, in sage.databases.oeis
> Failed example:
> c.comments()  # optional -- internet
> Expected:
> 0: The first 5821569425 terms were computed by _Eric W. Weisstein_ on 
> Sep 18 2011.
> 1: The first 10672905501 terms were computed by _Eric W. Weisstein_ on 
> Jul 17 2013.
> 2: The first 150 terms were computed by _Eric W. Weisstein_ on 
> Jul 27 2013.
> Got:
> 0: The first 5821569425 terms were comp

[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Matthias Köppe
On Thursday, May 27, 2021 at 5:55:39 AM UTC-7 Sébastien Labbé wrote:

> I have python3.6 and python3.8 installed on my system:
> [...]
> My python3.8 has the above librairies available. But, it seems that my 
> python3.8 is not picked up by the configure script:
>
>
See 
https://wiki.sagemath.org/ReleaseTours/sage-9.2#Selecting_a_system_Python_to_use_for_Sage.27s_venv
 

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Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Dima Pasechnik
On Thu, 27 May 2021, 15:34 Clemens Heuberger, 
wrote:

> Also on Ubuntu 18.04 (without any optional packages apart ccache
> installed), I
> have the failing doctest with graph.py (two out of three runs) and
> consistently
>
> $ ./sage -t --long --random-seed=0 src/sage/misc/package.py
> Running doctests with ID 2021-05-27-16-31-10-59754af4.
> Using --optional=build,ccache,debian,dochtml,pip,sage,sage_spkg
> Doctesting 1 file.
> sage -t --long --warn-long 42.6 --random-seed=0 src/sage/misc/package.py
> **
> File "src/sage/misc/package.py", line 359, in
> sage.misc.package.installed_packages
> Failed example:
>  installed_packages()['sage_conf']  # optional - build
> Expected:
>  'none'
> Got:
>  '9.4.beta0'
>

this is fixed in a ticket I reviewed today.

**
>
>
> Am 27.05.21 um 14:44 schrieb Sébastien Labbé:
> > On Ubuntu 18.04, testing with various optional and external packages, I
> obtain:
> >
> > --
> > sage -t --long --warn-long 77.6 --random-seed=0
> src/sage/databases/oeis.py  # 3
> > doctests failed
> > sage -t --long --warn-long 77.6 --random-seed=0
> src/sage/graphs/graph.py  # 1
> > doctest failed
> > sage -t --long --warn-long 77.6 --random-seed=0
> > src/sage/symbolic/integration/external.py  # 1 doctest failed
> > sage -t --long --warn-long 77.6 --random-seed=0
> src/sage/tests/cmdline.py  # 1
> > doctest failed
> > --
> > External software detected for doctesting:
> > ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc
> >
> > Rerunning failed test, the issue with graph.py does not show again:
> >
> > --
> > sage -t --long --warn-long 102.7 --random-seed=0
> src/sage/databases/oeis.py  # 3
> > doctests failed
> > sage -t --long --warn-long 102.7 --random-seed=0
> > src/sage/symbolic/integration/external.py  # 1 doctest failed
> > sage -t --long --warn-long 102.7 --random-seed=0
> src/sage/tests/cmdline.py  # 1
> > doctest failed
> > --
> > External software detected for doctesting: internet,pandoc
> >
> >
> > The issue with graph.py is related to Gap, see below:
> >
> >
> > sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py
> > **
> > File "src/sage/graphs/graph.py", line 2713, in
> > sage.graphs.graph.Graph.is_edge_transitive
> > Failed example:
> >  C.is_edge_transitive()
> > Exception raised:
> >  Traceback (most recent call last):
> >File
> >
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
>
> > line 714, in _run
> >  self.compile_and_execute(example, compiler, test.globs)
> >File
> >
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
>
> > line 1133, in compile_and_execute
> >  exec(compiled, globs)
> >File "",
> line 1,
> > in 
> >  C.is_edge_transitive()
> >File
> >
> "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/graphs/graph.py",
>
> > line 2731, in is_edge_transitive
> >  return libgap(A).OrbitLength(e, libgap.OnSets) == self.size()
> >File "sage/libs/gap/element.pyx", line 2677, in
> > sage.libs.gap.element.GapElement_MethodProxy.__call__
> > (build/cythonized/sage/libs/gap/element.c:20776)
> >  return GapElement_Function.__call__(self, *
> ([self.first_argument] +
> > list(args)))
> >File "sage/libs/gap/element.pyx", line 2525, in
> > sage.libs.gap.element.GapElement_Function.__call__
> > (build/cythonized/sage/libs/gap/element.c:19780)
> >  sig_on()
> >  sage.libs.gap.util.GAPError: Error, OnSets:  must be a set
> (not a
> > immutable non-strictly-sorted plain list of cyclotomics)
> > **
> > 1 item had failures:
> > 1 of   9 in sage.graphs.graph.Graph.is_edge_transitive
> >  2 mcqd tests not run
> >  2 not tested tests not run
> >  13 python_igraph tests not run
> >  0 tests not run because we ran out of time
> >  [1216 tests, 1 failure, 46.77 s]
> >
> >
> >
> > The other failures are copied below (I am not able to see the problem
> with the
> > first one):
> >
> >
> > sage -t --long --warn-long 102.7 --random-seed=0
> src/sage/databases/oeis.py
> > **
> > File "src/sage/databases/oeis.py", line 48, in sage.databases.oeis
> > Failed example:
> >  c.examples()  # optional -- internet
> > Expected:
> >  0: Pi = 3.1415926535897932384...
> >  1:= 3 + 1/(7 + 1/(15 + 1/(1 + 1/(29

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Clemens Heuberger
Also on Ubuntu 18.04 (without any optional packages apart ccache installed), I 
have the failing doctest with graph.py (two out of three runs) and consistently


$ ./sage -t --long --random-seed=0 src/sage/misc/package.py
Running doctests with ID 2021-05-27-16-31-10-59754af4.
Using --optional=build,ccache,debian,dochtml,pip,sage,sage_spkg
Doctesting 1 file.
sage -t --long --warn-long 42.6 --random-seed=0 src/sage/misc/package.py
**
File "src/sage/misc/package.py", line 359, in 
sage.misc.package.installed_packages
Failed example:
installed_packages()['sage_conf']  # optional - build
Expected:
'none'
Got:
'9.4.beta0'
**


Am 27.05.21 um 14:44 schrieb Sébastien Labbé:

On Ubuntu 18.04, testing with various optional and external packages, I obtain:

--
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/databases/oeis.py  # 3 
doctests failed
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py  # 1 
doctest failed
sage -t --long --warn-long 77.6 --random-seed=0 
src/sage/symbolic/integration/external.py  # 1 doctest failed
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/tests/cmdline.py  # 1 
doctest failed

--
External software detected for doctesting: 
ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc


Rerunning failed test, the issue with graph.py does not show again:

--
sage -t --long --warn-long 102.7 --random-seed=0 src/sage/databases/oeis.py  # 3 
doctests failed
sage -t --long --warn-long 102.7 --random-seed=0 
src/sage/symbolic/integration/external.py  # 1 doctest failed
sage -t --long --warn-long 102.7 --random-seed=0 src/sage/tests/cmdline.py  # 1 
doctest failed

--
External software detected for doctesting: internet,pandoc


The issue with graph.py is related to Gap, see below:


sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py
**
File "src/sage/graphs/graph.py", line 2713, in 
sage.graphs.graph.Graph.is_edge_transitive

Failed example:
     C.is_edge_transitive()
Exception raised:
     Traceback (most recent call last):
   File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py", 
line 714, in _run

     self.compile_and_execute(example, compiler, test.globs)
   File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py", 
line 1133, in compile_and_execute

     exec(compiled, globs)
   File "", line 1, 
in 

     C.is_edge_transitive()
   File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/graphs/graph.py", 
line 2731, in is_edge_transitive

     return libgap(A).OrbitLength(e, libgap.OnSets) == self.size()
   File "sage/libs/gap/element.pyx", line 2677, in 
sage.libs.gap.element.GapElement_MethodProxy.__call__ 
(build/cythonized/sage/libs/gap/element.c:20776)
     return GapElement_Function.__call__(self, * ([self.first_argument] + 
list(args)))
   File "sage/libs/gap/element.pyx", line 2525, in 
sage.libs.gap.element.GapElement_Function.__call__ 
(build/cythonized/sage/libs/gap/element.c:19780)

     sig_on()
     sage.libs.gap.util.GAPError: Error, OnSets:  must be a set (not a 
immutable non-strictly-sorted plain list of cyclotomics)

**
1 item had failures:
    1 of   9 in sage.graphs.graph.Graph.is_edge_transitive
     2 mcqd tests not run
     2 not tested tests not run
     13 python_igraph tests not run
     0 tests not run because we ran out of time
     [1216 tests, 1 failure, 46.77 s]



The other failures are copied below (I am not able to see the problem with the 
first one):



sage -t --long --warn-long 102.7 --random-seed=0 src/sage/databases/oeis.py
**
File "src/sage/databases/oeis.py", line 48, in sage.databases.oeis
Failed example:
     c.examples()  # optional -- internet
Expected:
     0: Pi = 3.1415926535897932384...
     1:    = 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
     2:    = [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...]
Got:
     0: Pi = 3.1415926535897932384...
     1:    = 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
     2:    = [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...].
**
File "src/sage/databases/oeis.py", line 53, in sage.databases.oeis
Failed example:
     c.comments()  # optional -- internet
Expected:
   

Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Sébastien Labbé


> Probably the "period" / "full stop" at the very end. 
>
> > ... 292, ...] 
> > ... 292, ...]. 
>

Goodeye, goodeye!
Needs review at:
https://trac.sagemath.org/ticket/31865
https://trac.sagemath.org/ticket/31866

Also the random failure with graph.py was noticed by Volker already:
https://trac.sagemath.org/ticket/31848


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Re: [sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Samuel Lelièvre
2021-05-27 12:44 UTC, Sébastien Labbé:
>
> On Ubuntu 18.04, testing with various optional
> and external packages, I obtain:
>
> The other failures are copied below (I am not able
> to see the problem with the first one):

Probably the "period" / "full stop" at the very end.

> ... 292, ...]
> ... 292, ...].

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[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Sébastien Labbé
I have python3.6 and python3.8 installed on my system:

$ python3
Python 3.6.9 (default, Jan 26 2021, 15:33:00) 
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> 
$ python3.8
Python 3.8.0 (default, Feb 25 2021, 22:10:10) 
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import sqlite3, ctypes, math, hashlib, crypt, readline, socket, zlib, 
distutils.core
>>>

My python3.8 has the above librairies available. But, it seems that my 
python3.8 is not picked up by the configure script:

##  ##
## Checking whether SageMath should install SPKG python3... ##
##  ##
configure:31962: checking whether any of bzip2 xz libffi is installed as or 
will be installed as SPKG
configure:31971: result: no
configure:31975: checking for python3 >= 3.7.0, < 3.10.0 with modules 
sqlite3, ctypes, math, hashlib, crypt, readline, socket, zlib, 
distutils.core
configure:32642: result: 
configure:32666: checking ... whether /usr/bin/python3 is good
configure:33250: result: no, Python 3.6.9 is too old
configure:33288: result: 
configure:33292: to try to use a different system python, use ./configure 
--with-python=/path/to/python
configure:33316: no suitable system package found for SPKG python3

Do you know why is my system python3.8 not picked up during installation?

Sébastien

On Wednesday, May 26, 2021 at 11:13:19 PM UTC+2 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew environments, 
> deployment targets 10.14, 10.15, 11.1
> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra to 
> be a field
> 068255ca05 Trac #31579: fix various lgtm suggestions
> 46ce983ad7 Trac #31575: Remove full boost package
> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
> formal group of an elliptic curve
> 814efa4100 Trac #31571: Improve interface to plantri
> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
> not leak in on macOS
> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
> does not cache
> a80dc50086 Trac #31452: Problem with solution_dict in solve
> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
> perpendicular_bisector
> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
> overlapping cones
> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
> field
> 07db8a8b87 Trac #31545: deprecate or remove 
> InfiniteAbstractCombinatorialClass
> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
> color_by_label
> a6c66a1d24 Trac #31540: Implement the alternating central extension of the 
> q-Onsager algebra
> 87d5c86cd2 Trac #31532: GH Actions: Restore test for optional/experimental 
> packages on macOS platforms
> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
> e07c1ef197 Trac #31516: Update arb to 2.19.0
> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with complex 
> embeddings
> f2c8b34947 Trac #31499: Check OpenMP at configuration
> ba189b2319 Trac #31469: Galois groups for finite fields
> 701d36be1e Trac #31427: Improve .dockerignore
> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
> libraries is not known to pkgconfig
> 21274d870a Trac #31345: Improve Selmer Group method for number fields
> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
> "random_element" to LPDictionary, InteractiveLPProblemStandardForm
> 9665ac4990 Trac #31179: Add package ipympl - Makes interactive features of 
> matplotlib available also in JupyterLab
> 6d05b6bf8c Trac #31108: Relaxed p-adics
> 08eadb587f Trac #31103: sage.numerical.backends: Replace use of TestSuite 
> by pytest
> a2ca61b1ac Trac #30861: Add more homebrew system package information, 
> including packages without spkg-configure.m4
> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support
> dce94e3121 Trac #30311: Immutability of Scalar Fields II
>

[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Sébastien Labbé
On Ubuntu 18.04, testing with various optional and external packages, I 
obtain:

--
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/databases/oeis.py  
# 3 doctests failed
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py  # 
1 doctest failed
sage -t --long --warn-long 77.6 --random-seed=0 
src/sage/symbolic/integration/external.py  # 1 doctest failed
sage -t --long --warn-long 77.6 --random-seed=0 src/sage/tests/cmdline.py  
# 1 doctest failed
--
External software detected for doctesting: 
ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc

Rerunning failed test, the issue with graph.py does not show again:

--
sage -t --long --warn-long 102.7 --random-seed=0 
src/sage/databases/oeis.py  # 3 doctests failed
sage -t --long --warn-long 102.7 --random-seed=0 
src/sage/symbolic/integration/external.py  # 1 doctest failed
sage -t --long --warn-long 102.7 --random-seed=0 src/sage/tests/cmdline.py  
# 1 doctest failed
--
External software detected for doctesting: internet,pandoc


The issue with graph.py is related to Gap, see below:


sage -t --long --warn-long 77.6 --random-seed=0 src/sage/graphs/graph.py
**
File "src/sage/graphs/graph.py", line 2713, in 
sage.graphs.graph.Graph.is_edge_transitive
Failed example:
C.is_edge_transitive()
Exception raised:
Traceback (most recent call last):
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
 
line 714, in _run
self.compile_and_execute(example, compiler, test.globs)
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/doctest/forker.py",
 
line 1133, in compile_and_execute
exec(compiled, globs)
  File "", line 
1, in 
C.is_edge_transitive()
  File 
"/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/graphs/graph.py",
 
line 2731, in is_edge_transitive
return libgap(A).OrbitLength(e, libgap.OnSets) == self.size()
  File "sage/libs/gap/element.pyx", line 2677, in 
sage.libs.gap.element.GapElement_MethodProxy.__call__ 
(build/cythonized/sage/libs/gap/element.c:20776)
return GapElement_Function.__call__(self, * ([self.first_argument] 
+ list(args)))
  File "sage/libs/gap/element.pyx", line 2525, in 
sage.libs.gap.element.GapElement_Function.__call__ 
(build/cythonized/sage/libs/gap/element.c:19780)
sig_on()
sage.libs.gap.util.GAPError: Error, OnSets:  must be a set (not a 
immutable non-strictly-sorted plain list of cyclotomics)
**
1 item had failures:
   1 of   9 in sage.graphs.graph.Graph.is_edge_transitive
2 mcqd tests not run
2 not tested tests not run
13 python_igraph tests not run
0 tests not run because we ran out of time
[1216 tests, 1 failure, 46.77 s]



The other failures are copied below (I am not able to see the problem with 
the first one):


sage -t --long --warn-long 102.7 --random-seed=0 src/sage/databases/oeis.py
**
File "src/sage/databases/oeis.py", line 48, in sage.databases.oeis
Failed example:
c.examples()  # optional -- internet
Expected:
0: Pi = 3.1415926535897932384...
1:= 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
2:= [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...]
Got:
0: Pi = 3.1415926535897932384...
1:= 3 + 1/(7 + 1/(15 + 1/(1 + 1/(292 + ...
2:= [a_0; a_1, a_2, a_3, ...] = [3; 7, 15, 1, 292, ...].
**
File "src/sage/databases/oeis.py", line 53, in sage.databases.oeis
Failed example:
c.comments()  # optional -- internet
Expected:
0: The first 5821569425 terms were computed by _Eric W. Weisstein_ on 
Sep 18 2011.
1: The first 10672905501 terms were computed by _Eric W. Weisstein_ on 
Jul 17 2013.
2: The first 150 terms were computed by _Eric W. Weisstein_ on 
Jul 27 2013.
Got:
0: The first 5821569425 terms were computed by _Eric W. Weisstein_ on 
Sep 18 2011.
1: The first 10672905501 terms were computed by _Eric W. Weisstein_ on 
Jul 17 2013.
2: The first 150 terms were computed by _Eric W. Weisstein_ on 
Jul 27 2013.
3: The first 30113021586 terms were computed by _Syed Fahad_ on Apr 27 
2021.
**
File "src/sage/databases/oeis.py", line 1706, in 
sage.databases.oeis.OEISSequence.examples
Failed example:
c.examples()  # optional -- internet

[sage-release] Re: Sage 9.4.beta0 released

2021-05-27 Thread Sébastien Labbé
Thank you for the release.

I observe that #21295 was merged twice:
12831dd5b0 Trac #21295: recognizable series (a base for k-regular sequences)
7f610a53c0 Trac #21295: recognizable series (a base for k-regular sequences)

It is the first time that I see such a thing.

Sébastien
On Wednesday, May 26, 2021 at 11:13:19 PM UTC+2 Volker Braun wrote:

> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html 
>
> 6aa4ecee16 (tag: 9.4.beta0, trac/develop) Updated SageMath version to 
> 9.4.beta0
> 9e7b0bd312 Trac #31567: tox.ini: Add local-macos-nohomebrew environments, 
> deployment targets 10.14, 10.15, 11.1
> 16f52682ae Trac #31838: gfortran: Accept system gfortran 11
> 61b50f85a7 Trac #31581: Do not require base ring of quaternion algebra to 
> be a field
> 068255ca05 Trac #31579: fix various lgtm suggestions
> 46ce983ad7 Trac #31575: Remove full boost package
> 5686795da4 Trac #31573: Improve the Weierstrass sigma function on the 
> formal group of an elliptic curve
> 814efa4100 Trac #31571: Improve interface to plantri
> cc3ff1c94b Trac #31570: iterator for maximal chains in poset
> fdca3596a1 Trac #31562: Patch giac so that libintl from /usr/local does 
> not leak in on macOS
> fcc9af582f Trac #31561: some details in cluster_seed and fqsym
> 9b484245c0 Trac #31547: Creating finite field using strings for modulus 
> does not cache
> a80dc50086 Trac #31452: Problem with solution_dict in solve
> 9203633b9b Trac #31436: Provide alternate layout for the cube graph
> 9addf207d9 Trac #30211: Characteristic Classes: Sequences
> 0d8373f534 Trac #29936: Fix moebius_transform, midpoint and 
> perpendicular_bisector
> 36a68a7a79 Trac #29527: GH Actions: Add docker-opensuse
> 75c60e17c5 Trac #28617: Comparison of Frobenius endomorphism is broken
> cd34206193 Trac #27366: Polyhedron.affine_hull: more output options
> 08a5cf8f42 Trac #25122: Construct RationalPolyhedralFan from possibly 
> overlapping cones
> 12831dd5b0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 78b00b0c86 Trac #31808: AA cannot convert real elements from a quadratic 
> field
> 07db8a8b87 Trac #31545: deprecate or remove 
> InfiniteAbstractCombinatorialClass
> 0df543c2a3 Trac #31542: Fix edge multiplicity in multidigraph plot with 
> color_by_label
> a6c66a1d24 Trac #31540: Implement the alternating central extension of the 
> q-Onsager algebra
> 87d5c86cd2 Trac #31532: GH Actions: Restore test for optional/experimental 
> packages on macOS platforms
> aa2223a86e Trac #31517: Make Sage output MathJax3 compatible htmls
> e07c1ef197 Trac #31516: Update arb to 2.19.0
> 7af69c5116 Trac #31514: number_field_elements_from_algebraics with complex 
> embeddings
> f2c8b34947 Trac #31499: Check OpenMP at configuration
> ba189b2319 Trac #31469: Galois groups for finite fields
> 701d36be1e Trac #31427: Improve .dockerignore
> 3d738182cd Trac #31384: cython_aliases: Do not fail if one of the listed 
> libraries is not known to pkgconfig
> 21274d870a Trac #31345: Improve Selmer Group method for number fields
> 1da81a0ac8 Trac #31307: interactive_simplex_method: Add static methods 
> "random_element" to LPDictionary, InteractiveLPProblemStandardForm
> 9665ac4990 Trac #31179: Add package ipympl - Makes interactive features of 
> matplotlib available also in JupyterLab
> 6d05b6bf8c Trac #31108: Relaxed p-adics
> 08eadb587f Trac #31103: sage.numerical.backends: Replace use of TestSuite 
> by pytest
> a2ca61b1ac Trac #30861: Add more homebrew system package information, 
> including packages without spkg-configure.m4
> 3859440591 <(385)%20944-0591> Trac #30551: Drop Python 3.6 support
> dce94e3121 Trac #30311: Immutability of Scalar Fields II
> eed9fe4be8 Trac #30213: tox.ini: Add scientificlinux
> 8cab4cd2e2 Trac #29972: Make stats doctests ready for random seeds
> 05c2ecadc5 Trac #29703: Upgrade gcc to 10.3 (latest 10.x)
> 7ee6218134 Trac #29013: Add configure option --with-sage-venv=SAGE_VENV to 
> create venv there instead of in SAGE_LOCAL
> 89134ebdbc Trac #29009: Error using mpmath (python 3 version)
> b15fe7517b Trac #27957: AG codes and decoders
> b47d2ad084 Trac #26161: Refine polynomial quotient rings to the finite 
> subcategory on initialization
> 5919b40d0a Trac #23940: implement proper black-box discrete logarithm for 
> AdditiveAbelianGroupWrapper
> 7f610a53c0 Trac #21295: recognizable series (a base for k-regular 
> sequences)
> 9bdf65da5d Trac #20165: Speedup CrystalOfLSPaths
> d2a0b73c1d Trac #18863: Subgroup doesn't work with number field unit group
> c8258dbf7e Trac #18272: unset MACOSX_DEPLOYMENT_TARGET, rather than 
> sometimes setting a bogus value
> 2a3f0073b9 Trac #15216: Parking functions reject their offspring
> 337d941a2f Trac #13111: variable camera position, light, etc. for tachyon 
> ray tracer
> 9a0dfef090 Trac #10928: Test that getitem of numpy matrix using Sage 
> integers works
> 2cf6

[sage-release] Re: Sage 9.4.beta0 released

2021-05-26 Thread Kwankyu Lee
Thanks for the beta release.

It seems unusual that the tickets included in the release are not yet 
closed in Trac.

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