[sage-release] Re: Sage 9.6.beta1 released
FWIW, on Debian testing running on core i7 + 16 GB RAM, updating 9.5 to 9.6.beta1 and running ptestlong results, *mirabile dictu*, in no failure at all. HTH, Le dimanche 13 février 2022 à 13:02:24 UTC+1, Volker Braun a écrit : > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 826061adbb (tag: 9.6.beta1, trac/develop) Updated SageMath version to > 9.6.beta1 > 33dd1c9955 Trac #33252: Update pip to 22.0.2 > e83330435f Trac #33250: Finite-dimensional algebras with basis: add > __invert__ method > d06a6212d5 Trac #33249: BipartiteGraph() silently ignores given > 'partition' argument > 0d8e569bf7 Trac #33248: Fix timeout in feature test for Mathematica > 66935029c5 Trac #33236: timeouts in parallel/map_reduce.py > 31baa9a456 Trac #33231: [Errno 86] Bad CPU type in executable: 'convert' > d5af5f5453 Trac #33221: Add example of projective space to manifold catalog > c87e36bd86 Trac #33218: speed up poly.valuation(other_poly) > 53fce2228a Trac #33217: reduce in quotient rings is broken > b407a5a027 Trac #33209: cleanup elliptic Tate curve file > b3369f1c2c Trac #33199: Replace imports from sage.graphs.all by more > specific imports > 5728190f70 Trac #33197: Fix Cython incompatible redefinition warnings in > LP backends > 66814f7540 Trac #33192: Bug in LiE interface > b19633a805 Trac #33188: fix E111 (indentation) in graphs and coding > 02cb1b25ee Trac #33185: Fix "referenced before assignment" warnings in > element_givaro.pyx > 8052adfc50 Trac #33181: fix E111 (indentation) in algebras, etc > 33d232a1f4 Trac #33180: fix E111 in misc, modular, schemes > ff22b75fab Trac #33179: fix some optional u-prefix doctests > 0ca031632e Trac #33172: fix pycodestyle E111 in combinat > 14f11b0e96 Trac #33167: Improve is_functional of lrs feature > ab3995f29b Trac #33159: wrong result solving equation system with symbolic > matrix > b54df4b5b7 Trac #33158: kRegularSequence: minimization wrong > 98fa6a8081 Trac #33157: Use `parent` function, not method, to convert SR > to RBF or CBF > ed83033673 Trac #33154: random doctest failure in sage.plot.matrix_plot > d36593f6ca Trac #33148: fix doctest in quantum_group_gap > 9d70f9795f Trac #33146: Replace imports from sage.*.all by more specific > imports in combinat > 81c27adcbb Trac #33142: remove doctest parsing of py2 long integers > e85707f043 Trac #33121: PARI/GP for elliptic curve discrete logarithms > (elllog) and Weil pairings (ellweilpairing) > 963fec89c2 Trac #33119: Remove deprecated things in `geometry/polyhedron` > for sage-9.6 > 04a135dc61 Trac #32999: Remove imports from sage.libs.all > fea9271f67 Trac #32976: LLL, min, max, short_vectors for IntegralLattice > 15646a87bf Trac #32801: Clean the use of weights in generic_graph.py - > part 3 > d46009ed0b Trac #32800: Clean the use of weights in generic_graph.py - > part 2 > 51f7b326cf Trac #19951: Remove occurrences of trait_names > b41fb2fb18 Trac #33296: tox.ini: Add -recommended package factor > db7554fa67 Trac #33277: build/pkgs/_recommended/dependencies > 5d2a381c37 Trac #33196: tox.ini: Add centos-stream-8, centos-stream-9, > remove defunct centos-6 > 4fc783e6db Trac #33085: adjust dochtml label so doctests pass when html > doc is not built/installed > 45706f82b6 Trac #33033: Prepare sage.doctest for namespace packages > 55fd5edb38 Trac #33027: zombie maxima process - if invoked from a script > b34c0d5ded Trac #31529: texlive: Add spkg-configure.m4 and system package > information; remove install script > c4e4a6387f Trac #31415: GH Actions workflow that builds documentation on > each push > 9cc853b81b Trac #33107: Generic cholesky() fails on the trivial matrix > 88a98d50c3 Trac #33103: gitpod integration using Docker images from > portability testing workflow > d4466d825b Trac #33102: some details in shuffle and multizeta > 09de266470 Trac #33098: Add more void packages to distros/void.txt > 73dd8d1cf5 Trac #33096: src/tox.ini (relint): Exclude editor temp files > etc. > a0d0888f54 Trac #33095: again some details in Dyck words > 4fa191a754 Trac #33071: Update pillow to 8.4 > 733ed250a3 Trac #33070: Package upgrades for Python 3.10 support > e4f3f1dc9b Trac #33069: Remove spkg speaklater > 18ba1d8cdd Trac #33064: sage_docbuild: fails when cache cannot be saved > 467c32cce3 Trac #33049: Update scipy to 1.7.3 > 2cf334f97d Trac #33048: Update setuptools to 59.8.0 > 3a4cc169b4 Trac #33045: ffmpeg tests time out > 8fb89a37bb Trac #33039: Random doctest failure in continued_fraction_gosper > 236856d0da Trac #33026: make BinaryQF.solve_integer() work for square > discriminants > 2ad7305f87 Trac #33015: Random failure in number_field_element.pyx > c45f12e9e6 Trac #33009: Move is_prism and is_bipyramid to combinatorial > polyhedron > 87011e965e Trac #33008: Polyhedron_base.facet_adjacency_matrix: Do not use > face_lattice > 46cc022732 Trac #33007: Remove imports
[sage-release] Re: Sage 9.6.beta1 released
After `make distclean`, I managed to let make complete correctly. So on Ubuntu 18.04 with few optional and external packages installed, running tests gives Running doctests with ID 2022-02-16-13-33-33-bf595c7c. Git branch: develop Using --optional=4ti2,build,ccache,cryptominisat,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,lidia,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg Features to be detected: 4ti2,benzene,bliss,buckygen,conway_polynomials,cplex,csdp,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_jones_numfield,database_knotinfo,dvipng,ffmpeg,graphviz,gurobi,imagemagick,internet,jupymake,kenzo,latex,latex_package_tkz_graph,latte_int,lrslib,lualatex,macaulay2,magma,maple,mathematica,matlab,mcqd,meataxe,octave,pandoc,pdf2svg,pdflatex,pdftocairo,plantri,pynormaliz,python_igraph,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.plot,sage.rings.number_field,sage.rings.padics,sage.rings.real_double,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scilab,sphinx,tdlib,xelatex [...] -- sage -t --long --random-seed=17221948269536709498924172128130603585 src/sage/combinat/designs/incidence_structures.py # 1 doctest failed sage -t --long --random-seed=17221948269536709498924172128130603585 src/sage/graphs/generic_graph.py # 2 doctests failed sage -t --long --random-seed=17221948269536709498924172128130603585 src/sage/graphs/graph.py # 3 doctests failed sage -t --long --random-seed=17221948269536709498924172128130603585 src/sage/tests/cmdline.py # 1 doctest failed -- Features detected for doctesting: dvipng,ffmpeg,graphviz,imagemagick,internet,latex,latex_package_tkz_graph,lualatex,octave,pandoc,pdf2svg,pdflatex,pdftocairo,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.plot,sage.rings.number_field,sage.rings.padics,sage.rings.real_double,sage.symbolic,sagemath_doc_html,sphinx,xelatex When reproducing the tests, I get: -- sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/combinat/designs/incidence_structures.py # 1 doctest failed sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/graphs/generic_graph.py # 2 doctests failed sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/graphs/graph.py # 2 doctests failed sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/tests/cmdline.py # 1 doctest failed -- Features detected for doctesting: graphviz,internet,latex,pandoc,sage.groups,sage.symbolic I copy paste the failures below. No now failures. Follow-up at https://trac.sagemath.org/ticket/25536 sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/combinat/designs/incidence_structures.py ** File "src/sage/combinat/designs/incidence_structures.py", line 2042, in sage.combinat.designs.incidence_structures.IncidenceStructure.? Failed example: len(designs.steiner_triple_system(7).coloring()) Expected: 3 Got: 2 ** 1 item had failures: 1 of 35 in sage.combinat.designs.incidence_structures.IncidenceStructure.? 8 gap_packages tests not run 3 not tested tests not run 0 tests not run because we ran out of time [339 tests, 1 failure, 1.16 s] sage -t --long --random-seed=128719743142658761791632862209348634600 src/sage/graphs/generic_graph.py ** File "src/sage/graphs/generic_graph.py", line 8975, in sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow Failed example: h = g.nowhere_zero_flow(k=3) Expected: Traceback (most recent call last): ... EmptySetError: the problem has no feasible solution Got: ** File "src/sage/graphs/generic_graph.py", line 9603, in sage.graphs.generic_graph.GenericGraph.? Failed example: p1,p2 = g.disjoint_routed_paths([((0, 0), (4, 4)), ((0, 4), (4, 0))]) Expected: Traceback (most recent call last): ... EmptySetError: the disjoint routed paths do not exist Got: ** 2 items had failures: 1 of 1092 in sage.graphs.generic_graph.GenericGraph.? 1 of 29 in sage.graphs.generic_graph.GenericGraph.nowhere_zero_flow 17 bliss tests not run 6 not tested tests not run 38 python_igraph tests not run 0 tests not run because we ran out of time [3684 tests, 2 failures, 35.67 s] sage -t --long
[sage-release] Re: Sage 9.6.beta1 released
Trying to update from recent version, I get: [sagemath_doc_html-none] installing. Log file: /home/slabbe/GitBox/sage/logs/pkgs/sagemath_doc_html-none.log [sagemath_doc_html-none] error installing, exit status 2. End of log file: [sagemath_doc_html-none] from .number_field import (NumberField, NumberFieldTower, CyclotomicField, QuadraticField, [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/number_field/number_field.py", line 117, in [sagemath_doc_html-none] from sage.rings.polynomial.polynomial_element import is_Polynomial [sagemath_doc_html-none] File "sage/rings/polynomial/polynomial_element.pyx", line 67, in init sage.rings.polynomial.polynomial_element (build/cythonized/sage/rings/polynomial/polynomial_element.c:107237) [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/polynomial/polynomial_ring.py", line 152, in [sagemath_doc_html-none] import sage.rings.polynomial.polynomial_element_generic as polynomial_element_generic [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/polynomial/polynomial_element_generic.py", line 1556, in [sagemath_doc_html-none] from sage.rings.polynomial.polynomial_rational_flint import Polynomial_rational_flint [sagemath_doc_html-none] File "sage/rings/polynomial/polynomial_rational_flint.pyx", line 1, in init sage.rings.polynomial.polynomial_rational_flint (build/cythonized/sage/rings/polynomial/polynomial_ratio nal_flint.cpp:27916) [sagemath_doc_html-none] ImportError: libflint.so.15: cannot open shared object file: No such file or directory [sagemath_doc_html-none] Error: './sage --docbuild --all-documents' failed [sagemath_doc_html-none] Makefile:32: recipe for target 'doc-inventory-reference' failed [sagemath_doc_html-none] make[5]: *** [doc-inventory-reference] Error 1 [sagemath_doc_html-none] Traceback (most recent call last): [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/runpy.py", line 188, in _run_module_as_main [sagemath_doc_html-none] mod_name, mod_spec, code = _get_module_details(mod_name, _Error) [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/runpy.py", line 147, in _get_module_details [sagemath_doc_html-none] return _get_module_details(pkg_main_name, error) [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/runpy.py", line 111, in _get_module_details [sagemath_doc_html-none] __import__(pkg_name) [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage_docbuild/__init__.py", line 55, in [sagemath_doc_html-none] import sage.all [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/all.py", line 131, in [sagemath_doc_html-none] from sage.rings.all import * [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/all.py", line 55, in [sagemath_doc_html-none] from .number_field.all import * [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/number_field/all.py", line 2, in [sagemath_doc_html-none] from .number_field import (NumberField, NumberFieldTower, CyclotomicField, QuadraticField, [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/number_field/number_field.py", line 117, in [sagemath_doc_html-none] from sage.rings.polynomial.polynomial_element import is_Polynomial [sagemath_doc_html-none] File "sage/rings/polynomial/polynomial_element.pyx", line 67, in init sage.rings.polynomial.polynomial_element (build/cythonized/sage/rings/polynomial/polynomial_element.c:107237) [sagemath_doc_html-none] File "/home/slabbe/GitBox/sage/local/lib/python3.9/site-packages/sage/rings/polynomial/polynomial_ring.py", line 152, in [sagemath_doc_html-none] import sage.rings.polynomial.polynomial_element_generic as polynomial_element_generic [sagemath_doc_html-none] File
[sage-release] Re: Sage 9.6.beta1 released
On Ubuntu 20.04 running on Xeon E5-2623 + 16 GB RAM: - incremental build (-j16) from Sage 9.6.beta0 with system python (3.8.10) failed with the error: [sagemath_doc_html-none] ImportError: libflint.so.15: cannot open shared object file: No such file or directory Running "make sagelib-clean" as suggested by Matthias fixed it, allowing for a successful build - make ptestlong --> "All tests passed!" Eric. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/56853992-fdd6-47e6-ac9e-e08b3bdedb31n%40googlegroups.com.
