[sage-support] Re: Usage Styles and using scipy

2009-06-10 Thread Marky Marc

Wow, thanks for answering so many questions.

On Jun 10, 4:03 am, Jason Grout jason-s...@creativetrax.com wrote:
 MarkyMarcwrote:
  Thanks for the many useful answers in this thread from several people.
  (And thanks for the book on Rubik's Cube, David Joyner ;-)

  Now, once again please forgive these questions if they're silly.
  Firstly, regarding neatly typesetting text and maths, I've tried the
  funky javascript editor (shift+click blue bar), but I don't thinks
  it's not quite what I'm looking for. Moreover, I haven't found how to
  edit text once it's entered. How is this done?

 Double-click on the text.



Ah yes! I guess double-clicking is not an intuitive way of doing it as
single clicking highlights the text. Text one highlights is rarely
treated as buttons or hyperlinks in GUIs. OK, you can highlight links
but it's fiddly. Well, that's my excuse for not figuring that one
out ;-)


  Preferrably I'd like to enter sage/python code in the form of a self-
  documenting program (actually, there's a better term for this, but
  I've forgotten it).

 Literate programming


Brilliant, yes! Some long-forgotten cogs are squealing at the back of
my brain.


 I'd like to have lots of neatly formatted latex



  commentary accomanying my sage code, ie I want to be able to
  intersperse latex and sage code. I've done this in the past in latex
  (and some programming lanuage) with some extra tools and packages that
  extract and compile code from a latex document, run it, then retrieve
  and typeset the results.

  I've tried using the latex(.) function. It neatly typsets a maths
  object, but so far I've only combined it with
  text through statements of the form
  print  %s  % latex(object)
  which doesn't make for nicely typeset text, headings, piecewise-
  defined-equations etc.

  Typing %latex at the start of a cell makes all of that cell's content
  interpretted and processed as latex markup -- great for the
  commentary, but then I can't switch back to sage commands in the same
  cell.

  OK, maybe I should be content with starting a new cell if I want to
  switch from latex entry to sage entry. But then, ideally, I could
  still refer to a sage object in a latex cell which would render the
  referred object as tex in the latex cell. Thus, I wouldn't need to
  manually transliterate a rendered sage expression (say) in to latex in
  a latex cell containing commentary of a sage cell.

  Am I making sense? Is anything like this possible?

 You might check out sagetex
 (http://www.ctan.org/tex-archive/help/Catalogue/entries/sagetex.html;
 updated version athttp://bitbucket.org/ddrake/sagetex/or installed by
 doing sage -i sagetex-2.1.1 )


Sounds like that's what I want, thanks.

 It means you are editing a latex document, but you can do all of those
 things you mentioned above with sagetex.



  Being the first sage material I read, Sage for Newbies appeared to
  be prepared in a manner that is exactly what I'm looking for. In it
  Ted Kosan briefly mentions  speed and presentation  usage
  styles, and that the latter usage style was the one in which the book
  was prepared, but then he leaves the details of usage styles
  unexplained and marked only to be developed.

  Perhaps if Ted Kosan's source file from which Sage for Newbies was
  generated could be made available I could try and pick up the details
  from there?

OK. Yes, an OpenOffice file is available. I had the impression that
this wasn't the source but was rather the OO doc was generated from
some other sage session. I'll look in to it.


 Ted's book was written in OpenOffice.  I thought the source file was in
 the same directory.  That book hasn't been updated in probably several
 years; it may or may not reflect the current nature of Sage.  I don't know.





  Now, on other silly topics:
  I've switched from using sage 3.2 on my machine to using the
  sagenb.org server. It seems the latter has poorer typesetting
  abilities than v3.2, eg often (but not always) renders sqrt(.) as sqrt
  (...) rather than using the usual symbol. Why? Is it something I set?

  Finally, regarding this code:
  
  var('X kappa')
  X=sqrt(kappa)
  F=exp(X)
  show(F/F)
  -
  On v3.2 on my machine the answer is shown as 1, but the sagenb.org
  server tells me it's
  e^{2*sqrt(kappa)}  as though it were showing F*F. What's going on
  here?

 In the past few weeks, we've switched to a new system for doing
 symbolics which is much faster and promises a great future.  There are
 some patches still going in to better handle the typesetting; these
 issues may be associated with the update.


Regarding the code I posted: am I doing something stupid to not get
1 as the answer. I really like the idea of the notebook server, but
at the moment it seems that sagenb.org is not typesetting well (which
you addressed) and is returning faulty answers. Particularly for the
latter reason it's not terribly usable. OK, I'm probably jumping to

[sage-support] Re: Usage Styles and using scipy

2009-06-10 Thread Burcin Erocal

Hi,

On Wed, 10 Jun 2009 01:12:57 -0700 (PDT)
Marky Marc marcahr...@gmail.com wrote:

snip
   Now, on other silly topics:
   I've switched from using sage 3.2 on my machine to using the
   sagenb.org server. It seems the latter has poorer typesetting
   abilities than v3.2, eg often (but not always) renders sqrt(.) as
   sqrt (...) rather than using the usual symbol. Why? Is it
   something I set?

As Jason mentioned, this is caused by the switch in the default
symbolics backend. We didn't have enough time to test things
thoroughly. We're tracking the typesetting problem here:

http://trac.sagemath.org/sage_trac/ticket/6211

I just added your example to the ticket.

   Finally, regarding this code:
   
   var('X kappa')
   X=sqrt(kappa)
   F=exp(X)
   show(F/F)
   -
   On v3.2 on my machine the answer is shown as 1, but the
   sagenb.org server tells me it's
   e^{2*sqrt(kappa)}  as though it were showing F*F. What's going on
   here?
 
  In the past few weeks, we've switched to a new system for doing
  symbolics which is much faster and promises a great future.  There
  are some patches still going in to better handle the typesetting;
  these issues may be associated with the update.
 
 
 Regarding the code I posted: am I doing something stupid to not get
 1 as the answer. I really like the idea of the notebook server, but
 at the moment it seems that sagenb.org is not typesetting well (which
 you addressed) and is returning faulty answers. Particularly for the
 latter reason it's not terribly usable. OK, I'm probably jumping to
 conclusions in that last sentence... I must be doing something silly
 in my code. Perhamps there's some semantic nuance I'm unaware of?

This is a serious bug in the new code we added for simplifying
expressions involving exp's. I made a new ticket for this,

http://trac.sagemath.org/sage_trac/ticket/6256

It's a blocker for 4.0.2. I hope I can get to it before the release
this weekend.


Many thanks for reporting these.

Cheers,
Burcin

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[sage-support] Re: Usage Styles and using scipy

2009-06-09 Thread Marky Marc

Thanks for the many useful answers in this thread from several people.
(And thanks for the book on Rubik's Cube, David Joyner ;-)

Now, once again please forgive these questions if they're silly.
Firstly, regarding neatly typesetting text and maths, I've tried the
funky javascript editor (shift+click blue bar), but I don't thinks
it's not quite what I'm looking for. Moreover, I haven't found how to
edit text once it's entered. How is this done?

Preferrably I'd like to enter sage/python code in the form of a self-
documenting program (actually, there's a better term for this, but
I've forgotten it). I'd like to have lots of neatly formatted latex
commentary accomanying my sage code, ie I want to be able to
intersperse latex and sage code. I've done this in the past in latex
(and some programming lanuage) with some extra tools and packages that
extract and compile code from a latex document, run it, then retrieve
and typeset the results.

I've tried using the latex(.) function. It neatly typsets a maths
object, but so far I've only combined it with
text through statements of the form
print  %s  % latex(object)
which doesn't make for nicely typeset text, headings, piecewise-
defined-equations etc.

Typing %latex at the start of a cell makes all of that cell's content
interpretted and processed as latex markup -- great for the
commentary, but then I can't switch back to sage commands in the same
cell.

OK, maybe I should be content with starting a new cell if I want to
switch from latex entry to sage entry. But then, ideally, I could
still refer to a sage object in a latex cell which would render the
referred object as tex in the latex cell. Thus, I wouldn't need to
manually transliterate a rendered sage expression (say) in to latex in
a latex cell containing commentary of a sage cell.

Am I making sense? Is anything like this possible?

Being the first sage material I read, Sage for Newbies appeared to
be prepared in a manner that is exactly what I'm looking for. In it
Ted Kosan briefly mentions  speed and presentation  usage
styles, and that the latter usage style was the one in which the book
was prepared, but then he leaves the details of usage styles
unexplained and marked only to be developed.

Perhaps if Ted Kosan's source file from which Sage for Newbies was
generated could be made available I could try and pick up the details
from there?

Now, on other silly topics:
I've switched from using sage 3.2 on my machine to using the
sagenb.org server. It seems the latter has poorer typesetting
abilities than v3.2, eg often (but not always) renders sqrt(.) as sqrt
(...) rather than using the usual symbol. Why? Is it something I set?

Finally, regarding this code:

var('X kappa')
X=sqrt(kappa)
F=exp(X)
show(F/F)
-
On v3.2 on my machine the answer is shown as 1, but the sagenb.org
server tells me it's
e^{2*sqrt(kappa)}  as though it were showing F*F. What's going on
here?

Thanks heaps,
   Marc



On May 13, 5:52 am, David Joyner wdjoy...@gmail.com wrote:
 On Tue, May 12, 2009 at 10:56 AM, Marky Marc marcahr...@gmail.com wrote:

  Hi,
  I'm brand new to sage and have just read Sage for Newbies. Thanks
  Ted kosan for that. I have several questions.

  Immediately I wanted to do some work with sage and am loath to just do
  maths without documenting things as I go. Thus I really want to know
  how to use Usage Styles, which are mentioned in Kosan's book but not
  documented yet.  Where can I get info on Usage Styles?

 Did he meanhttp://www.python.org/dev/peps/pep-0008/?
 I can't find the discussion of usage stlyes 
 athttp://sage.math.washington.edu/home/tkosan/newbies_book/



  Or, at the very least, I'm happy to use print statements, but how do I
  print arbitrary TeX math's for markup by jsMath? (ie just as
  documentation, not by using show(.) on objects.)

 Have you read the tutorial?http://www.sagemath.org/doc/tutorial/index.html
 Maybe you are looking for the latex(...) command?



  Also, can I expect to be able to use scipy methods from sage, or does
  sage generally replace/wrap-up these with its own methods? Where's a
  good reference to sage's libraries?

 You can use Sage's wrappers to scipy or scipy 
 directly.http://www.sagemath.org/doc/reference/



  Finally, how do I assert variables to be real (or imaginary, or
  whatever)? I want to do this to so I can find the complex conjugate of
  a symbolic expression by asserting that a variable in the expression
  is real.

 This should be in the tutorial or reference manual.



  Thanks, and sorry if the questions are stupid,

 Good questions. Hope you have fun with Sage!

   Marc
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[sage-support] Re: Usage Styles and using scipy

2009-06-09 Thread Jason Grout

Marky Marc wrote:
 Thanks for the many useful answers in this thread from several people.
 (And thanks for the book on Rubik's Cube, David Joyner ;-)
 
 Now, once again please forgive these questions if they're silly.
 Firstly, regarding neatly typesetting text and maths, I've tried the
 funky javascript editor (shift+click blue bar), but I don't thinks
 it's not quite what I'm looking for. Moreover, I haven't found how to
 edit text once it's entered. How is this done?

Double-click on the text.


 
 Preferrably I'd like to enter sage/python code in the form of a self-
 documenting program (actually, there's a better term for this, but
 I've forgotten it). 

Literate programming


I'd like to have lots of neatly formatted latex
 commentary accomanying my sage code, ie I want to be able to
 intersperse latex and sage code. I've done this in the past in latex
 (and some programming lanuage) with some extra tools and packages that
 extract and compile code from a latex document, run it, then retrieve
 and typeset the results.
 
 I've tried using the latex(.) function. It neatly typsets a maths
 object, but so far I've only combined it with
 text through statements of the form
 print  %s  % latex(object)
 which doesn't make for nicely typeset text, headings, piecewise-
 defined-equations etc.
 
 Typing %latex at the start of a cell makes all of that cell's content
 interpretted and processed as latex markup -- great for the
 commentary, but then I can't switch back to sage commands in the same
 cell.
 
 OK, maybe I should be content with starting a new cell if I want to
 switch from latex entry to sage entry. But then, ideally, I could
 still refer to a sage object in a latex cell which would render the
 referred object as tex in the latex cell. Thus, I wouldn't need to
 manually transliterate a rendered sage expression (say) in to latex in
 a latex cell containing commentary of a sage cell.
 
 Am I making sense? Is anything like this possible?

You might check out sagetex 
(http://www.ctan.org/tex-archive/help/Catalogue/entries/sagetex.html; 
updated version at http://bitbucket.org/ddrake/sagetex/ or installed by 
doing sage -i sagetex-2.1.1 )

It means you are editing a latex document, but you can do all of those 
things you mentioned above with sagetex.



 
 Being the first sage material I read, Sage for Newbies appeared to
 be prepared in a manner that is exactly what I'm looking for. In it
 Ted Kosan briefly mentions  speed and presentation  usage
 styles, and that the latter usage style was the one in which the book
 was prepared, but then he leaves the details of usage styles
 unexplained and marked only to be developed.
 
 Perhaps if Ted Kosan's source file from which Sage for Newbies was
 generated could be made available I could try and pick up the details
 from there?


Ted's book was written in OpenOffice.  I thought the source file was in 
the same directory.  That book hasn't been updated in probably several 
years; it may or may not reflect the current nature of Sage.  I don't know.


 
 Now, on other silly topics:
 I've switched from using sage 3.2 on my machine to using the
 sagenb.org server. It seems the latter has poorer typesetting
 abilities than v3.2, eg often (but not always) renders sqrt(.) as sqrt
 (...) rather than using the usual symbol. Why? Is it something I set?
 
 Finally, regarding this code:
 
 var('X kappa')
 X=sqrt(kappa)
 F=exp(X)
 show(F/F)
 -
 On v3.2 on my machine the answer is shown as 1, but the sagenb.org
 server tells me it's
 e^{2*sqrt(kappa)}  as though it were showing F*F. What's going on
 here?
 


In the past few weeks, we've switched to a new system for doing 
symbolics which is much faster and promises a great future.  There are 
some patches still going in to better handle the typesetting; these 
issues may be associated with the update.

Thanks,

Jason

-- 
Jason Grout


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[sage-support] Re: Usage Styles and using scipy

2009-05-13 Thread Kevin Horton

On 12 May 2009, at 21:46, kcrisman wrote:

 You can also shift-click on the blue bar to bring up a nice  
 editor, in
 which you can enter latex code like you did above.  This basically
 is a
 nice way of editing text in between cells.

 For an example, do what you did above (put that text in between the
 cells) and then go back to the worksheet and doubleclick on the  
 math.
 It should pop up the editor and let you edit it.

 I didn't know that.  Thanks.  That looks useful.

 That's an understatement, as it turns out - many of us can't imagine
 going back.  Jason is too humble to mention that he is largely
 responsible for that being part of Sage now :)


Well done Jason - Thanks!

The baffling part is why you don't get this editor when you click the  
Edit button in a notebook worksheet.  As it sits now, with no obvious  
visual clue that this editor even exists, most users would never  
discover its existence.  Are there any plans to change that?

--
Kevin Horton
Ottawa, Canada




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[sage-support] Re: Usage Styles and using scipy

2009-05-13 Thread Mike Hansen

On Wed, May 13, 2009 at 3:44 AM, Kevin Horton khorto...@rogers.com wrote:
 Well done Jason - Thanks!

 The baffling part is why you don't get this editor when you click the
 Edit button in a notebook worksheet.  As it sits now, with no obvious
 visual clue that this editor even exists, most users would never
 discover its existence.  Are there any plans to change that?

There is something there under the HTML section on the help page for
the notebook.  See http://sagenb.org/help/ .  But, it could probably
be made more clear and/or advertised better.

--Mike

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[sage-support] Re: Usage Styles and using scipy

2009-05-13 Thread Jason Grout

Kevin Horton wrote:
 
 
 Well done Jason - Thanks!
 
 The baffling part is why you don't get this editor when you click the  
 Edit button in a notebook worksheet.  As it sits now, with no obvious  
 visual clue that this editor even exists, most users would never  
 discover its existence.  Are there any plans to change that?


Good point.  What do you suggest?

The html editor is mentioned (several times?) in the Help page.  My 
thoughts up to this point were that the Edit button is mainly for being 
able to edit and copy the worksheet as a text file, so  putting the 
editor in the Edit page is probably not appropriate.  What do you think? 
   How do you suggest we make the editor a more visible part of Sage to 
the new user?

What about changing the new cell (blue) bar so that it had two links, 
one that said New computation and another link that said New text?

Thanks,

Jason



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[sage-support] Re: Usage Styles and using scipy

2009-05-12 Thread David Joyner

On Tue, May 12, 2009 at 10:56 AM, Marky Marc marcahr...@gmail.com wrote:

 Hi,
 I'm brand new to sage and have just read Sage for Newbies. Thanks
 Ted kosan for that. I have several questions.

 Immediately I wanted to do some work with sage and am loath to just do
 maths without documenting things as I go. Thus I really want to know
 how to use Usage Styles, which are mentioned in Kosan's book but not
 documented yet.  Where can I get info on Usage Styles?

Did he mean http://www.python.org/dev/peps/pep-0008/ ?
I can't find the discussion of usage stlyes at
http://sage.math.washington.edu/home/tkosan/newbies_book/



 Or, at the very least, I'm happy to use print statements, but how do I
 print arbitrary TeX math's for markup by jsMath? (ie just as
 documentation, not by using show(.) on objects.)


Have you read the tutorial?
http://www.sagemath.org/doc/tutorial/index.html
Maybe you are looking for the latex(...) command?



 Also, can I expect to be able to use scipy methods from sage, or does
 sage generally replace/wrap-up these with its own methods? Where's a
 good reference to sage's libraries?

You can use Sage's wrappers to scipy or scipy directly.
http://www.sagemath.org/doc/reference/


 Finally, how do I assert variables to be real (or imaginary, or
 whatever)? I want to do this to so I can find the complex conjugate of
 a symbolic expression by asserting that a variable in the expression
 is real.

This should be in the tutorial or reference manual.


 Thanks, and sorry if the questions are stupid,


Good questions. Hope you have fun with Sage!


  Marc

 


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[sage-support] Re: Usage Styles and using scipy

2009-05-12 Thread Kevin Horton

On 12 May 2009, at 10:56, Marky Marc wrote:

 I'm brand new to sage and have just read Sage for Newbies. Thanks
 Ted kosan for that. I have several questions.

 Immediately I wanted to do some work with sage and am loath to just do
 maths without documenting things as I go. Thus I really want to know
 how to use Usage Styles, which are mentioned in Kosan's book but not
 documented yet.  Where can I get info on Usage Styles?

 Or, at the very least, I'm happy to use print statements, but how do I
 print arbitrary TeX math's for markup by jsMath? (ie just as
 documentation, not by using show(.) on objects.)


It is worth looking at some of the notebook worksheets on the sage  
public server:

http://www.sagenb.org/pub

You can download copies of any of the public worksheets, then load the  
copy onto your server.  Or, create your own account on the sage public  
server, and edit a copy of any worksheet there.

I'm very new to sage myself, so perhaps I have not yet found the  
optimum solution.  For the moment, I am embedding latex math equations  
in html, like:

p align='center'$W_{1}=\frac{1}{2}\rho_{1}V_{1}^{2}SC_{l}$/p

The html explanatory notes go between the cells, and are entered after  
clicking the Edit button while viewing a worksheet.  You can see an  
example of what I created:

https://99.240.209.8:8000/home/pub/11

--
Kevin Horton
Ottawa, Canada




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[sage-support] Re: Usage Styles and using scipy

2009-05-12 Thread Jason Grout

Kevin Horton wrote:
 On 12 May 2009, at 10:56, Marky Marc wrote:
 
 I'm brand new to sage and have just read Sage for Newbies. Thanks
 Ted kosan for that. I have several questions.

 Immediately I wanted to do some work with sage and am loath to just do
 maths without documenting things as I go. Thus I really want to know
 how to use Usage Styles, which are mentioned in Kosan's book but not
 documented yet.  Where can I get info on Usage Styles?

 Or, at the very least, I'm happy to use print statements, but how do I
 print arbitrary TeX math's for markup by jsMath? (ie just as
 documentation, not by using show(.) on objects.)

 
 It is worth looking at some of the notebook worksheets on the sage  
 public server:
 
 http://www.sagenb.org/pub
 
 You can download copies of any of the public worksheets, then load the  
 copy onto your server.  Or, create your own account on the sage public  
 server, and edit a copy of any worksheet there.
 
 I'm very new to sage myself, so perhaps I have not yet found the  
 optimum solution.  For the moment, I am embedding latex math equations  
 in html, like:
 
 p align='center'$W_{1}=\frac{1}{2}\rho_{1}V_{1}^{2}SC_{l}$/p
 
 The html explanatory notes go between the cells, and are entered after  
 clicking the Edit button while viewing a worksheet.  You can see an  
 example of what I created:
 
 https://99.240.209.8:8000/home/pub/11
 

You can also shift-click on the blue bar to bring up a nice editor, in 
which you can enter latex code like you did above.  This basically is a 
nice way of editing text in between cells.

For an example, do what you did above (put that text in between the 
cells) and then go back to the worksheet and doubleclick on the math. 
It should pop up the editor and let you edit it.

Jason


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[sage-support] Re: Usage Styles and using scipy

2009-05-12 Thread Kevin Horton

On 12 May 2009, at 18:18, Jason Grout wrote:

 Kevin Horton wrote:
 I'm very new to sage myself, so perhaps I have not yet found the
 optimum solution.  For the moment, I am embedding latex math  
 equations
 in html, like:

 p align='center'$W_{1}=\frac{1}{2}\rho_{1}V_{1}^{2}SC_{l}$/p

 The html explanatory notes go between the cells, and are entered  
 after
 clicking the Edit button while viewing a worksheet.  You can see an
 example of what I created:

 https://99.240.209.8:8000/home/pub/11


 You can also shift-click on the blue bar to bring up a nice editor, in
 which you can enter latex code like you did above.  This basically  
 is a
 nice way of editing text in between cells.

 For an example, do what you did above (put that text in between the
 cells) and then go back to the worksheet and doubleclick on the math.
 It should pop up the editor and let you edit it.


I didn't know that.  Thanks.  That looks useful.

--
Kevin Horton
Ottawa, Canada




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[sage-support] Re: Usage Styles and using scipy

2009-05-12 Thread kcrisman



  You can also shift-click on the blue bar to bring up a nice editor, in
  which you can enter latex code like you did above.  This basically  
  is a
  nice way of editing text in between cells.

  For an example, do what you did above (put that text in between the
  cells) and then go back to the worksheet and doubleclick on the math.
  It should pop up the editor and let you edit it.

 I didn't know that.  Thanks.  That looks useful.

That's an understatement, as it turns out - many of us can't imagine
going back.  Jason is too humble to mention that he is largely
responsible for that being part of Sage now :)

- kcrisman
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