[scikit-learn] scikit-learn 0.24 installation fails with ModuleNotFoundError: No module named 'scipy'

2021-01-20 Thread Bertrand B. 
To whom it may concern,

I am trying to install scikit-learn in a PySpark job using the
install_pypi_package PySpark API but the install fails with :

sc.install_pypi_package("scikit-learn")

Collecting scikit-learn
  Using cached 
https://files.pythonhosted.org/packages/db/e2/9c0bde5f81394b627f623557690536b12017b84988a4a1f98ec826edab9e/scikit-learn-0.24.0.tar.gz
Requirement already satisfied: numpy>=1.13.3 in
/usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting scipy>=0.19.1 (from scikit-learn)
  Using cached 
https://files.pythonhosted.org/packages/58/9d/8296d8211318d690119eba6d293b7a149c1c51c945342dd4c3816f79e1ba/scipy-1.6.0-cp37-cp37m-manylinux1_x86_64.whl
Requirement already satisfied: joblib>=0.11 in
/usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting threadpoolctl>=2.0.0 (from scikit-learn)
  Using cached 
https://files.pythonhosted.org/packages/f7/12/ec3f2e203afa394a149911729357aa48affc59c20e2c1c8297a60f33f133/threadpoolctl-2.1.0-py3-none-any.whl
Building wheels for collected packages: scikit-learn
  Running setup.py bdist_wheel for scikit-learn: started
  Running setup.py bdist_wheel for scikit-learn: finished with status 'error'
  Complete output from command /tmp/161109300-0/bin/python -u -c
"import setuptools,
tokenize;__file__='/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py';f=getattr(tokenize,
'open', open)(__file__);code=f.read().replace('\r\n',
'\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d
/tmp/tmpry3gf9r0pip-wheel- --python-tag cp37:
  Partial import of sklearn during the build process.
  Traceback (most recent call last):
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line
201, in check_package_status
  module = importlib.import_module(package)
File "/tmp/161109300-0/lib64/python3.7/importlib/__init__.py",
line 127, in import_module
  return _bootstrap._gcd_import(name[level:], package, level)
File "", line 1006, in _gcd_import
File "", line 983, in _find_and_load
File "", line 965, in _find_and_load_unlocked
  ModuleNotFoundError: No module named 'scipy'
  Traceback (most recent call last):
File "", line 1, in 
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line
306, in 
  setup_package()
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line
294, in setup_package
  check_package_status('scipy', min_deps.SCIPY_MIN_VERSION)
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line
227, in check_package_status
  .format(package, req_str, instructions))
  ImportError: scipy is not installed.
  scikit-learn requires scipy >= 0.19.1.

I do not encounter this error with scikit-learn 0.23.2 :

sc.install_pypi_package("scikit-learn==0.23.2")

Collecting scikit-learn==0.23.2
  Using cached 
https://files.pythonhosted.org/packages/f4/cb/64623369f348e9bfb29ff898a57ac7c91ed4921f228e9726546614d63ccb/scikit_learn-0.23.2-cp37-cp37m-manylinux1_x86_64.whl
Requirement already satisfied: scipy>=0.19.1 in
/mnt/tmp/161109300-0/lib/python3.7/site-packages (from
scikit-learn==0.23.2)
Requirement already satisfied: numpy>=1.13.3 in
/usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: joblib>=0.11 in
/usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: threadpoolctl>=2.0.0 in
/mnt/tmp/161109300-0/lib/python3.7/site-packages (from
scikit-learn==0.23.2)
Installing collected packages: scikit-learn
Successfully installed scikit-learn-0.23.2


Could you please help me understand why the scikit-learn 0.24 installation
fails ?

Thank you for your help,

Bertrand
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Re: [scikit-learn] scikit-learn 0.24 installation fails with ModuleNotFoundError: No module named 'scipy'

2021-01-20 Thread Guillaume Lemaître 
 Basically it get the tar with the source and recompile instead of using the wheel. Could you force an install from PyPI without using the cached file. We pushed wheels yesterday for 0.24.1 as well so it should not get the 0.24.0 version. For 0.23.2, you can see that it used the wheel (.whl).  Sent from my phone - sorry to be brief and potential misspell.From: bertrand25...@gmail.comSent: 20 January 2021 23:21To: scikit-learn@python.orgReply to: scikit-learn@python.orgSubject: [scikit-learn] scikit-learn 0.24 installation fails with ModuleNotFoundError: No module named 'scipy'  To whom it may concern,I am trying to install scikit-learn in a PySpark job using the install_pypi_package PySpark API but the install fails with : sc.install_pypi_package("scikit-learn")

Collecting scikit-learn
  Using cached https://files.pythonhosted.org/packages/db/e2/9c0bde5f81394b627f623557690536b12017b84988a4a1f98ec826edab9e/scikit-learn-0.24.0.tar.gz
Requirement already satisfied: numpy>=1.13.3 in /usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting scipy>=0.19.1 (from scikit-learn)
  Using cached https://files.pythonhosted.org/packages/58/9d/8296d8211318d690119eba6d293b7a149c1c51c945342dd4c3816f79e1ba/scipy-1.6.0-cp37-cp37m-manylinux1_x86_64.whl
Requirement already satisfied: joblib>=0.11 in /usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting threadpoolctl>=2.0.0 (from scikit-learn)
  Using cached https://files.pythonhosted.org/packages/f7/12/ec3f2e203afa394a149911729357aa48affc59c20e2c1c8297a60f33f133/threadpoolctl-2.1.0-py3-none-any.whl
Building wheels for  collected packages: scikit-learn
  Running setup.py bdist_wheelfor  scikit-learn: started
  Running setup.py bdist_wheelfor scikit-learn: finished with status 'error'
  Complete output from command /tmp/161109300-0/bin/python -u -c "import setuptools, tokenize;__file__='/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmpry3gf9r0pip-wheel- --python-tag cp37:
  Partial import of sklearn during the build process.
  Traceback (most recent call last):
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line 201, in check_package_status
  module = importlib.import_module(package)
File "/tmp/161109300-0/lib64/python3.7/importlib/__init__.py", line 127, in import_module
  return _bootstrap._gcd_import(name[level:], package, level)
File "", line 1006, in _gcd_import
File "", line 983, in _find_and_load
File "", line 965, in _find_and_load_unlocked
  ModuleNotFoundError: No module named 'scipy'
  Traceback (most recent call last):
File "", line 1, in 
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line 306, in 
  setup_package()
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line 294, in setup_package
  check_package_status('scipy', min_deps.SCIPY_MIN_VERSION)
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py", line 227, in check_package_status
  .format(package, req_str, instructions))
  ImportError: scipy is not installed.
  scikit-learn requires scipy >= 0.19.1.I do not encounter this error with scikit-learn 0.23.2 :sc.install_pypi_package("scikit-learn==0.23.2") 

Collecting scikit-learn==0.23.2
  Using cached https://files.pythonhosted.org/packages/f4/cb/64623369f348e9bfb29ff898a57ac7c91ed4921f228e9726546614d63ccb/scikit_learn-0.23.2-cp37-cp37m-manylinux1_x86_64.whl
Requirement already satisfied: scipy>=0.19.1 in /mnt/tmp/161109300-0/lib/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: numpy>=1.13.3 in /usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: joblib>=0.11 in /usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: threadpoolctl>=2.0.0 in /mnt/tmp/161109300-0/lib/python3.7/site-packages (from scikit-learn==0.23.2)
Installing collected packages: scikit-learn
Successfully installed scikit-learn-0.23.2 Could you please help me understand why the scikit-learn 0.24 installation fails ?Thank you for your help,Bertrand
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Re: [scikit-learn] scikit-learn 0.24 installation fails with ModuleNotFoundError: No module named 'scipy'

2021-01-20 Thread The Helmbolds via scikit-learn 
Use the Anaconda Python installation.
"You won't find the right answers if you don't ask the right questions!" 
(Robert Helmbold, 2013) 

On Wednesday, January 20, 2021, 04:16:15 PM MST, Guillaume Lemaître 
 wrote:  
 
 #yiv4846675950 
#yiv4846675950response_container_BBPPID{font-family:initial;font-size:initial;color:initial;}
 Basically it get the tar with the source and recompile instead of using the 
wheel. Could you force an install from PyPI without using the cached file. 
We pushed wheels yesterday for 0.24.1 as well so it should not get the 0.24.0 
version. 
For 0.23.2, you can see that it used the wheel (.whl).   
  
Sent from my phone - sorry to be brief and potential misspell. 
  
|   From: bertrand25mtl@gmail.comSent: 20 January 2021 23:21To: 
scikit-learn@python.orgReply to: scikit-learn@python.orgSubject: [scikit-learn] 
scikit-learn 0.24 installation fails with ModuleNotFoundError: No module named 
'scipy' |

 
 To whom it may concern,
I am trying to install scikit-learn in a PySpark job using the 
install_pypi_package PySpark API but the install fails with : 
sc.install_pypi_package("scikit-learn")

Collecting scikit-learn
  Using cached 
https://files.pythonhosted.org/packages/db/e2/9c0bde5f81394b627f623557690536b12017b84988a4a1f98ec826edab9e/scikit-learn-0.24.0.tar.gz
 
Requirement already satisfied: numpy>=1.13.3 in 
/usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting scipy>=0.19.1 (from scikit-learn)
  Using cached 
https://files.pythonhosted.org/packages/58/9d/8296d8211318d690119eba6d293b7a149c1c51c945342dd4c3816f79e1ba/scipy-1.6.0-cp37-cp37m-manylinux1_x86_64.whl
 
Requirement already satisfied: joblib>=0.11 in 
/usr/local/lib64/python3.7/site-packages (from scikit-learn)
Collecting threadpoolctl>=2.0.0 (from scikit-learn)
  Using cached 
https://files.pythonhosted.org/packages/f7/12/ec3f2e203afa394a149911729357aa48affc59c20e2c1c8297a60f33f133/threadpoolctl-2.1.0-py3-none-any.whl
Building wheels for  collected packages: scikit-learn
  Running setup.py bdist_wheelfor  scikit-learn: started
  Running setup.py bdist_wheelfor scikit-learn: finished with status 'error'
  Complete output from command /tmp/161109300-0/bin/python -u -c "import 
setuptools, 
tokenize;__file__='/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py 
';f=getattr(tokenize, 'open', open)(__file__);code=f.read ().replace('\r\n', 
'\n');f.close ();exec(compile(code, __file__, 'exec'))" bdist_wheel -d 
/tmp/tmpry3gf9r0pip-wheel- --python-tag cp37:
  Partial import of sklearn during the build process.
  Traceback (most recent call last):
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py ", line 201, in 
check_package_status
  module = importlib.import_module(package)
File "/tmp/161109300-0/lib64/python3.7/importlib/__init__.py", line 
127, in import_module
  return _bootstrap._gcd_import(name[level:], package, level)
File "", line 1006, in _gcd_import
File "", line 983, in _find_and_load
File "", line 965, in _find_and_load_unlocked
  ModuleNotFoundError: No module named 'scipy'
  Traceback (most recent call last):
File "", line 1, in 
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py ", line 306, in 

  setup_package()
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py ", line 294, in 
setup_package
  check_package_status('scipy', min_deps.SCIPY_MIN_VERSION)
File "/mnt/tmp/pip-build-phc6p6gl/scikit-learn/setup.py ", line 227, in 
check_package_status
  .format(package, req_str, instructions))
  ImportError: scipy is not installed.
  scikit-learn requires scipy >= 0.19.1.
I do not encounter this error with scikit-learn 0.23.2 :
sc.install_pypi_package("scikit-learn==0.23.2") 

Collecting scikit-learn==0.23.2
  Using cached 
https://files.pythonhosted.org/packages/f4/cb/64623369f348e9bfb29ff898a57ac7c91ed4921f228e9726546614d63ccb/scikit_learn-0.23.2-cp37-cp37m-manylinux1_x86_64.whl
 
Requirement already satisfied: scipy>=0.19.1 in 
/mnt/tmp/161109300-0/lib/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: numpy>=1.13.3 in 
/usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: joblib>=0.11 in 
/usr/local/lib64/python3.7/site-packages (from scikit-learn==0.23.2)
Requirement already satisfied: threadpoolctl>=2.0.0 in 
/mnt/tmp/161109300-0/lib/python3.7/site-packages (from scikit-learn==0.23.2)
Installing collected packages: scikit-learn
Successfully installed scikit-learn-0.23.2 
Could you please help me understand why the scikit-learn 0.24 installation 
fails ?
Thank you for your help,
Bertrand___
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