Re: [SIESTA-L] ./configure: Permission denied

2009-05-14 Thread Edan Scriven
In the absence of any other information and assuming your compiler is  
working fine, did you check that the configure file is executable?


Edit: sorry for the accidental extra post.

Edan.

On 15/05/2009, at 10:18 AM, Jonas Baltrusaitis wrote:


Hi,

I am not sure why, but when I download, unpack siesta-2.0.2 cd into  
Src and try ./configure it gives me


[r...@mr9540 Src]# ./configure
-bash: ./configure: Permission denied
[r...@mr9540 Src]#

I am loged in as a root so now I am puzzled why is the permission  
denied. Does it have anything to do with the code itself?


thanks

Jonas





Re: [SIESTA-L] ./configure: Permission denied

2009-05-14 Thread Jonas Baltrusaitis
yep, looks like this was the problem.

thanks

Jonas

--- On Thu, 5/14/09, Edan Scriven e...@physics.uq.edu.au wrote:

 From: Edan Scriven e...@physics.uq.edu.au
 Subject: Re: [SIESTA-L] ./configure: Permission denied
 To: SIESTA-L@listserv.uam.es
 Date: Thursday, May 14, 2009, 6:12 PM
 In the absence of any other
 information and assuming your compiler is working fine, did
 you check that the configure file is executable?
 
 Edit: sorry for the accidental extra post.
 
 Edan.
 
 On 15/05/2009, at 10:18 AM, Jonas Baltrusaitis wrote:
 
  Hi,
  
  I am not sure why, but when I download, unpack
 siesta-2.0.2 cd into Src and try ./configure it gives me
  
  [r...@mr9540 Src]# ./configure
  -bash: ./configure: Permission denied
  [r...@mr9540 Src]#
  
  I am loged in as a root so now I am puzzled why is the
 permission denied. Does it have anything to do with the code
 itself?
  
  thanks
  
  Jonas
  
  
  
 


  


Re: [SIESTA-L] ./configure: Permission denied

2009-05-14 Thread Jonas Baltrusaitis
yep, found it, thanks.

When I compile it with default options and run it in parallel via PBS I get

mpirun noticed that job rank 0 with PID 18442 on node compute-0-2 exited on 
signal 6 (Aborted). 

What generically can cause this error so I can recompile it and run it properly?

thanks

Jonas

--- On Thu, 5/14/09, Ravi Agrawal raviagrawal2...@u.northwestern.edu wrote:

 From: Ravi Agrawal raviagrawal2...@u.northwestern.edu
 Subject: Re: [SIESTA-L] ./configure: Permission denied
 To: SIESTA-L@listserv.uam.es
 Date: Thursday, May 14, 2009, 6:29 PM
 Jonas,
 
 You might have to change the permissions of the file and
 make it an executable. If you can't do that somehow, you
 should try this:
 . ./configure
 
 Hope it works.
 
 Regards,
 Ravi
 
 
 On Thu, May 14, 2009 at 7:18 PM,
 Jonas Baltrusaitis jasiu...@yahoo.com
 wrote:
 
 Hi,
 
 
 
 I am not sure why, but when I download, unpack siesta-2.0.2
 cd into Src and try ./configure it gives me
 
 
 
 [r...@mr9540 Src]# ./configure
 
 -bash: ./configure: Permission denied
 
 [r...@mr9540 Src]#
 
 
 
 I am loged in as a root so now I am puzzled why is the
 permission denied. Does it have anything to do with the code
 itself?
 
 
 
 thanks
 
 
 
 Jonas
 
 
 
 
 
 
 
 
 
 
 -- 
 PhD Candidate
 Espinosa Research Group
 Mechanical Engineering
 Northwestern University
 2145 Sheridan Road, Tech Bldg.
 Evanston, IL 60208 - 3111
 Phone: (847) - 467 - 7673
 
 
 


  


Re: [SIESTA-L] ./configure: Permission denied

2009-05-14 Thread Ravi Agrawal
Jonas,

You might have to change the permissions of the file and make it an
executable. If you can't do that somehow, you should try this:
*. ./configure*

Hope it works.

Regards,
Ravi

On Thu, May 14, 2009 at 7:18 PM, Jonas Baltrusaitis jasiu...@yahoo.comwrote:

 Hi,

 I am not sure why, but when I download, unpack siesta-2.0.2 cd into Src and
 try ./configure it gives me

 [r...@mr9540 Src]# ./configure
 -bash: ./configure: Permission denied
 [r...@mr9540 Src]#

 I am loged in as a root so now I am puzzled why is the permission denied.
 Does it have anything to do with the code itself?

 thanks

 Jonas






-- 
PhD Candidate
Espinosa Research Group
Mechanical Engineering
Northwestern University
2145 Sheridan Road, Tech Bldg.
Evanston, IL 60208 - 3111
Phone: (847) - 467 - 7673