Public bug reported:
After upgrade from 16.04 to 18.04, and re-installing meep 1.3.4 from the
repository packages, I try to run it with:
mpirun -np 6 python3 my_model.py
but the run fails:
import meep as mp
File "/usr/local/lib/python3.5/site-packages/meep/__init__.py", line 28, in
<module>
_meep = swig_import_helper()
File "/usr/local/lib/python3.5/site-packages/meep/__init__.py", line 24, in
swig_import_helper
_mod = imp.load_module('_meep', fp, pathname, description)
File "/usr/lib/python3.6/imp.py", line 243, in load_module
return load_dynamic(name, filename, file)
File "/usr/lib/python3.6/imp.py", line 343, in load_dynamic
return _load(spec)
ImportError: libhdf5_openmpi.so.10: cannot open shared object file: No such
file or directory
Traceback (most recent call last):
File "pb_replication.py", line 6, in <module>
import meep as mp
File "/usr/local/lib/python3.5/site-packages/meep/__init__.py", line 28, in
<module>
_meep = swig_import_helper()
File "/usr/local/lib/python3.5/site-packages/meep/__init__.py", line 24, in
swig_import_helper
_mod = imp.load_module('_meep', fp, pathname, description)
File "/usr/lib/python3.6/imp.py", line 243, in load_module
return load_dynamic(name, filename, file)
File "/usr/lib/python3.6/imp.py", line 343, in load_dynamic
return _load(spec)
(Repeated for each thread)
Examining my system, it seems only libhdf5_openmpi.so.100 is installed in 18.04?
apt-cache policy meep reports:
meep:
Installed: 1.3-4build2
Candidate: 1.3-4build2
Version table:
*** 1.3-4build2 500
500 http://archive.ubuntu.com/ubuntu bionic/universe amd64 Packages
100 /var/lib/dpkg/status
meep -V reports:
Meep 1.12.0, Copyright (C) 2005-2019 Massachusetts Insitute of Technology.
Using libctl 4.4.0 and Guile 2.0.13.
** Affects: meep (Ubuntu)
Importance: Undecided
Status: New
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https://bugs.launchpad.net/bugs/1852944
Title:
meep fails with failure to load libhdf5_openmpi.so.10
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