Re: Php png attachement with commons.mail

2010-01-22 Thread Sébastien Bonaimé

Dear all,

Thank you for you help. I realised that I had two problems. First one  
was the space and %20 problem in the address


The second one was a .htaccess. I did not allow 127.0.0.1 to acces my  
php script.


Is it a bug ? If you can not access the URL because of a htaccess  
deny, you receive

 org.apache.commons.mail.EmailException: Invalid URL

Thank you

Sébastien Bonaimé
Tel: +33 (0)1 44 27 24 17 Fax: +33 (0)1 44 27 38 94
GEOSCOPE Dept Sismologie
Institut de Physique du Globe Paris
Tour 14-15, 4ème étage
4, place Jussieu
75252 Paris cedex 05
France

Le 20 janv. 10 à 20:18, Siegfried Goeschl a écrit :


Hi Stefano,

good catch ... :-)

Siegfried Goeschl

Stefano Bagnara wrote:

The whitespace is not a valid character for URLs. Your browser
automatically convert the space to %20 when making the request.
Try using %20 instead of space in your code (param2 value) and I  
guess

it will work.

Stefano

2010/1/20 Sébastien Bonaimé bona...@ipgp.fr:


I have the following error:
org.apache.commons.mail.EmailException: Invalid URL

set:http://myserver.mydomain.org/myphpscript.php?param1=122param2=2009-01-01

20:10:52

I changed name of the server, script and parameters...

Do you think it is possible to do that ?

In my browser,

http://myserver.mydomain.org/myphpscript.php?param1=122param2=2009-01-01 
 20:20:20


returns a correct png image.

I use the code that I found here:
http://commons.apache.org/email/userguide.html

Thank you


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Re: Php png attachement with commons.mail

2010-01-22 Thread Siegfried Goeschl
Hi Sebastien,

not sure if you got the execption due to the space issue or the
.htaccess problem. Do you have a stack trace for the access denied?

Cheers,

Siegfried Goeschl

Sébastien Bonaimé wrote:
 Dear all,

 Thank you for you help. I realised that I had two problems. First one
 was the space and %20 problem in the address

 The second one was a .htaccess. I did not allow 127.0.0.1 to acces my
 php script.

 Is it a bug ? If you can not access the URL because of a htaccess
 deny, you receive
  org.apache.commons.mail.EmailException: Invalid URL

 Thank you

 Sébastien Bonaimé
 Tel: +33 (0)1 44 27 24 17 Fax: +33 (0)1 44 27 38 94
 GEOSCOPE Dept Sismologie
 Institut de Physique du Globe Paris
 Tour 14-15, 4ème étage
 4, place Jussieu
 75252 Paris cedex 05
 France

 Le 20 janv. 10 à 20:18, Siegfried Goeschl a écrit :

 Hi Stefano,

 good catch ... :-)

 Siegfried Goeschl

 Stefano Bagnara wrote:
 The whitespace is not a valid character for URLs. Your browser
 automatically convert the space to %20 when making the request.
 Try using %20 instead of space in your code (param2 value) and I guess
 it will work.

 Stefano

 2010/1/20 Sébastien Bonaimé bona...@ipgp.fr:

 I have the following error:
 org.apache.commons.mail.EmailException: Invalid URL

 set:http://myserver.mydomain.org/myphpscript.php?param1=122param2=2009-01-01


 20:10:52

 I changed name of the server, script and parameters...

 Do you think it is possible to do that ?

 In my browser,

 http://myserver.mydomain.org/myphpscript.php?param1=122param2=2009-01-01
  20:20:20


 returns a correct png image.

 I use the code that I found here:
 http://commons.apache.org/email/userguide.html

 Thank you

 -
 To unsubscribe, e-mail: user-unsubscr...@commons.apache.org
 For additional commands, e-mail: user-h...@commons.apache.org


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 To unsubscribe, e-mail: user-unsubscr...@commons.apache.org
 For additional commands, e-mail: user-h...@commons.apache.org




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RE: [MATH] Need help on math libraries for curve generation

2010-01-22 Thread roger.b...@creoss.com
Luc
 Thanks for your comments. I have taken the 2DCurveExponentialX as a first 
attempt here. The basic equation is y = a + b*e^(c*x) (is the math e, natural 
exponential function). I have written the following implementation of the of 
the ParametricRealFunction for this, see below. Not having any experience with 
this type a implementation I did the best I could. However, I am getting this 
exception:

org.apache.commons.math.optimization.OptimizationException: unable to compute 
covariances: singular problem
I unfortunately do not have any idea what this means or how to remedy it. Your 
help is appreciated

Thanks
Roger

/**
* implementation of ParametricRealFunction clase for
*y = a + be^(cx)
*/
   public static class TwoDCurveNaturalLogX implements ParametricRealFunction
   {
   /*
*double[] coeffs = must include at least 1 but not more than 3 
coefficients.
*/
@Override
public double value(double x, double[] coeffs) throws 
FunctionEvaluationException
{
   if(coeffs == null || coeffs.length == 0 || coeffs.length  3)
   {
if (coeffs != null)
{
for (int ii=0; ii  coeffs.length; ii++)
{
//System.out.println(\t coeffs [+ii+]+coeffs[ii]);
}
}
else
{
   //System.out.println(No coeffs were passed in);
}
throw new FunctionEvaluationException(coeffs);
   }
   double a = coeffs[0];
   double b = 0;
   double c = 0;
   if(coeffs.length = 2)
   b = coeffs[1];
   if(coeffs.length = 3)
   c = coeffs[2];
  double value = a + b*Math.pow(Math.E, (c*x));
  //System.out.println(\t value [+value+]);
  return value;
}
/*
 * derivative: y = b*c*e^(c*x)
 * double[] coeffs = must include at least 1 but not more than 3 
coefficients.
 */
@Override
public double[] gradient(double x, double[] coeffs) throws 
FunctionEvaluationException {
   if(coeffs == null || coeffs.length ==0 || coeffs.length  3)
   {
throw new FunctionEvaluationException(coeffs);
   }
   System.out.println(\t coeffs length = [+coeffs.length+]);
   double a = coeffs[0];
   double b = 0;
   double c = 0;
   if(coeffs.length = 2)
   b = coeffs[1];
   if(coeffs.length = 3)
   c = coeffs[2];
   double gradient = b*c*Math.pow(Math.E, (c*x));
   double[] gradientVector = new double[3];
   gradientVector[0] = gradient;
   gradientVector[1] = 0;
   gradientVector[2] = 0;
   System.out.println(\t gradient [+gradient+]);
   return gradientVector;
}
   }


Luc

From: roger.b...@creoss.com
Sent: Thursday, January 21, 2010 11:46 AM
To: user@commons.apache.org
Subject: [MATH] Need help on math libraries for curve generation


We are evaluating the apache math library 
(http://commons.apache.org/math/index.html) for use on one of projects. In this 
project we need to generate curves based on the following functions:

2DCurve3rdOrderXPolynomial
2DCurveExponentialX
2DCurveNaturalLogX
2DCurveSquareRootX
2DCurveTimeConstantX
2DCurveExponentialDecayX
2DCurveLogarithmicDecayX
3DCurve4thOrderXPolynomial
3DCurveExponentialX
3DCurveNaturalLogX
3DCurveSquareRootX
3DCurveTimeConstantX
3DCurve3rdOrderZTimes4thOrderX
3DCurveExponentialDecayX
3DCurveLogarithmicDecayX
3DCurveExponentialDecayZ
3DCurveLogarithmicDecayZ
3DCurveHyprebolicDecayX

For each function generated from data we also need:

Coefficient of Determination
Sum of Squares
Standard Error of Regression

Does anyone have experience with this library to direct us to which classes can 
be used to handle these requirements?

Thanks
Roger Ball



Re: [MATH] Need help on math libraries for curve generation

2010-01-22 Thread Luc Maisonobe
roger.b...@creoss.com a écrit :
 Luc
  Thanks for your comments. I have taken the 2DCurveExponentialX as a 
 first attempt here. The basic equation is y = a + b*e^(c*x) (is the math e, 
 natural exponential function). I have written the following implementation of 
 the of the ParametricRealFunction for this, see below. Not having any 
 experience with this type a implementation I did the best I could. However, I 
 am getting this exception:
 
 org.apache.commons.math.optimization.OptimizationException: unable to compute 
 covariances: singular problem
 I unfortunately do not have any idea what this means or how to remedy it. 
 Your help is appreciated
 
 Thanks
 Roger
 
 /**
 * implementation of ParametricRealFunction clase for
 *y = a + be^(cx)
 */
public static class TwoDCurveNaturalLogX implements ParametricRealFunction
{
/*
 *double[] coeffs = must include at least 1 but not more than 3 
 coefficients.
 */
 @Override
 public double value(double x, double[] coeffs) throws 
 FunctionEvaluationException
 {
if(coeffs == null || coeffs.length == 0 || coeffs.length  3)
{
 if (coeffs != null)
 {
 for (int ii=0; ii  coeffs.length; ii++)
 {
 //System.out.println(\t coeffs [+ii+]+coeffs[ii]);
 }
 }
 else
 {
//System.out.println(No coeffs were passed in);
 }
 throw new FunctionEvaluationException(coeffs);
}
double a = coeffs[0];
double b = 0;
double c = 0;
if(coeffs.length = 2)
b = coeffs[1];
if(coeffs.length = 3)
c = coeffs[2];
   double value = a + b*Math.pow(Math.E, (c*x));
   //System.out.println(\t value [+value+]);
   return value;
 }
 /*
  * derivative: y = b*c*e^(c*x)
  * double[] coeffs = must include at least 1 but not more than 3 
 coefficients.
  */
 @Override
 public double[] gradient(double x, double[] coeffs) throws 
 FunctionEvaluationException {
if(coeffs == null || coeffs.length ==0 || coeffs.length  3)
{
 throw new FunctionEvaluationException(coeffs);
}
System.out.println(\t coeffs length = [+coeffs.length+]);
double a = coeffs[0];
double b = 0;
double c = 0;
if(coeffs.length = 2)
b = coeffs[1];
if(coeffs.length = 3)
c = coeffs[2];
double gradient = b*c*Math.pow(Math.E, (c*x));
double[] gradientVector = new double[3];
gradientVector[0] = gradient;
gradientVector[1] = 0;
gradientVector[2] = 0;

The gradient is computed with respect to the coefficients (i.e. a, b and
c here), not with respect to the independant variable x. It also *must*
have the same length as the parameters array. So you should probably use:

public double[] gradient(double x, double[] coeffs)
  throws FunctionEvaluationException {
final n = coeffs.length;
final double b = (n  1) ? coeffs[1] : 0;
final double c = (n  2) ? coeffs[2] : 0;
double[] gradient = new double[n];
gradient[0] = 1.0; // this is dy/da
if (n  1) {
   final double exp = Math.exp(c * x);
   gradient[1] = exp; // this is dy/db
   if (n  2) {
 gradient[2] = b * x * exp; // this is dy/dc
  }
}
return gradient;
}

The reason you get a singular problem is proably because of your wrong
gradient, the optimizer thinks the problem does not depend on b and c
(you tell it dy/db = 0 and dy/dc = 0), so it has no way to know how to
choose b and c. The jacobian matrix has too many zeroes.

I also suggest to use Math.exp(c * x) rather than Math.pow(Math.E, c *
x), it is more stable numerically and probably faster.

hope this helps
Luc


System.out.println(\t gradient [+gradient+]);
return gradientVector;
 }
}
 
 
 Luc
 
 From: roger.b...@creoss.com
 Sent: Thursday, January 21, 2010 11:46 AM
 To: user@commons.apache.org
 Subject: [MATH] Need help on math libraries for curve generation
 
 
 We are evaluating the apache math library 
 (http://commons.apache.org/math/index.html) for use on one of projects. In 
 this project we need to generate curves based on the following functions:
 
 2DCurve3rdOrderXPolynomial
 2DCurveExponentialX
 2DCurveNaturalLogX
 2DCurveSquareRootX
 2DCurveTimeConstantX
 2DCurveExponentialDecayX
 2DCurveLogarithmicDecayX
 3DCurve4thOrderXPolynomial
 3DCurveExponentialX
 3DCurveNaturalLogX
 3DCurveSquareRootX
 3DCurveTimeConstantX
 3DCurve3rdOrderZTimes4thOrderX
 3DCurveExponentialDecayX
 3DCurveLogarithmicDecayX