Re: train many decision tress with a single spark job

2015-01-12 Thread Josh Buffum
Sean,

Thanks for the response. Is there some subtle difference between one model
partitioned by N users or N models per each 1 user? I think I'm missing
something with your question.

Looping through the RDD filtering one user at a time would certainly give
me the response that I am hoping for (i.e a map of user = decisiontree),
however, that seems like it would yield poor performance? The userIDs are
not integers, so I either need to iterator through some in-memory array of
them (could be quite large) or have some distributed lookup table. Neither
seem great.

I tried the random split thing. I wonder if I did something wrong there,
but some of the splits got RDDs with 0 tuples and some got RDDs with  1
tuple. I guess that's to be expected with some random distribution?
However, that won't work for me since it breaks the one tree per user
thing. I guess I could randomly distribute user IDs and then do the scan
everything and filter step...

How bad of an idea is it to do:

data.groupByKey.map( kvp = {
  val (key, data) = kvp
  val tree = DecisionTree.train( sc.makeRDD(data), ... )
  (key, tree)
})

Is there a way I could tell spark not to distribute the RDD created by
sc.makeRDD(data) but just to deal with it on whatever spark worker is
handling kvp? Does that question make sense?

Thanks!

Josh

On Sun, Jan 11, 2015 at 4:12 AM, Sean Owen so...@cloudera.com wrote:

 You just mean you want to divide the data set into N subsets, and do
 that dividing by user, not make one model per user right?

 I suppose you could filter the source RDD N times, and build a model
 for each resulting subset. This can be parallelized on the driver. For
 example let's say you divide into N subsets depending on the value of
 the user ID modulo N:

 val N = ...
 (0 until N).par.map(d = DecisionTree.train(data.filter(_.userID % N
 == d), ...))

 data should be cache()-ed here of course.

 However it may be faster and more principled to take random subsets
 directly:

 data.randomSplit(Array.fill(N)(1.0 / N)).par.map(subset =
 DecisionTree.train(subset, ...))

 On Sun, Jan 11, 2015 at 1:53 AM, Josh Buffum jbuf...@gmail.com wrote:
  I've got a data set of activity by user. For each user, I'd like to
 train a
  decision tree model. I currently have the feature creation step
 implemented
  in Spark and would naturally like to use mllib's decision tree model.
  However, it looks like the decision tree model expects the whole RDD and
  will train a single tree.
 
  Can I split the RDD by user (i.e. groupByKey) and then call the
  DecisionTree.trainClassifer in a reduce() or aggregate function to
 create a
  RDD[DecisionTreeModels]? Maybe train the model with an in-memory dataset
  instead of an RDD? Call sc.parallelize on the Iterable values in a
 groupBy
  to create a mini-RDD?
 
  Has anyone else tried something like this with success?
 
  Thanks!



Re: train many decision tress with a single spark job

2015-01-12 Thread Josh Buffum
You are right... my code example doesn't work :)

I actually do want a decision tree per user. So, for 1 million users, I
want 1 million trees. We're training against time series data, so there are
still quite a few data points per users. My previous message where I
mentioned RDDs with no length was, I think, a result of the way the random
partitioning worked (I was partitioning into N groups where N was the
number of users... total).

Given this, I'm thinking the mlllib is not designed for this particular
case? It appears optimized for training across large datasets. I was just
hoping to leverage it since creating my feature sets for the users was
already in Spark.


On Mon, Jan 12, 2015 at 5:05 PM, Sean Owen so...@cloudera.com wrote:

 A model partitioned by users?

 I mean that if you have a million users surely you don't mean to build a
 million models. There would be little data per user right? Sounds like you
 have 0 sometimes.

 You would typically be generalizing across users not examining them in
 isolation. Models are built on thousands or millions of data points.

 I assumed you were subsetting for cross validation in which case we are
 talking about making more like say 10 models. You usually take random
 subsets. But it might be as fine to subset as a function of a user ID if
 you like. Or maybe you do have some reason for segregating users and
 modeling them differently (e.g. different geographies or something).

 Your code doesn't work as is since you are using RDDs inside RDDs. But I
 am also not sure you should do what it looks like you are trying to do.
 On Jan 13, 2015 12:32 AM, Josh Buffum jbuf...@gmail.com wrote:

 Sean,

 Thanks for the response. Is there some subtle difference between one
 model partitioned by N users or N models per each 1 user? I think I'm
 missing something with your question.

 Looping through the RDD filtering one user at a time would certainly give
 me the response that I am hoping for (i.e a map of user = decisiontree),
 however, that seems like it would yield poor performance? The userIDs are
 not integers, so I either need to iterator through some in-memory array of
 them (could be quite large) or have some distributed lookup table. Neither
 seem great.

 I tried the random split thing. I wonder if I did something wrong there,
 but some of the splits got RDDs with 0 tuples and some got RDDs with  1
 tuple. I guess that's to be expected with some random distribution?
 However, that won't work for me since it breaks the one tree per user
 thing. I guess I could randomly distribute user IDs and then do the scan
 everything and filter step...

 How bad of an idea is it to do:

 data.groupByKey.map( kvp = {
   val (key, data) = kvp
   val tree = DecisionTree.train( sc.makeRDD(data), ... )
   (key, tree)
 })

 Is there a way I could tell spark not to distribute the RDD created by
 sc.makeRDD(data) but just to deal with it on whatever spark worker is
 handling kvp? Does that question make sense?

 Thanks!

 Josh

 On Sun, Jan 11, 2015 at 4:12 AM, Sean Owen so...@cloudera.com wrote:

 You just mean you want to divide the data set into N subsets, and do
 that dividing by user, not make one model per user right?

 I suppose you could filter the source RDD N times, and build a model
 for each resulting subset. This can be parallelized on the driver. For
 example let's say you divide into N subsets depending on the value of
 the user ID modulo N:

 val N = ...
 (0 until N).par.map(d = DecisionTree.train(data.filter(_.userID % N
 == d), ...))

 data should be cache()-ed here of course.

 However it may be faster and more principled to take random subsets
 directly:

 data.randomSplit(Array.fill(N)(1.0 / N)).par.map(subset =
 DecisionTree.train(subset, ...))

 On Sun, Jan 11, 2015 at 1:53 AM, Josh Buffum jbuf...@gmail.com wrote:
  I've got a data set of activity by user. For each user, I'd like to
 train a
  decision tree model. I currently have the feature creation step
 implemented
  in Spark and would naturally like to use mllib's decision tree model.
  However, it looks like the decision tree model expects the whole RDD
 and
  will train a single tree.
 
  Can I split the RDD by user (i.e. groupByKey) and then call the
  DecisionTree.trainClassifer in a reduce() or aggregate function to
 create a
  RDD[DecisionTreeModels]? Maybe train the model with an in-memory
 dataset
  instead of an RDD? Call sc.parallelize on the Iterable values in a
 groupBy
  to create a mini-RDD?
 
  Has anyone else tried something like this with success?
 
  Thanks!





train many decision tress with a single spark job

2015-01-10 Thread Josh Buffum
I've got a data set of activity by user. For each user, I'd like to train a
decision tree model. I currently have the feature creation step implemented
in Spark and would naturally like to use mllib's decision tree model.
However, it looks like the decision tree model expects the whole RDD and
will train a single tree.

Can I split the RDD by user (i.e. groupByKey) and then call the
DecisionTree.trainClassifer in a reduce() or aggregate function to create a
RDD[DecisionTreeModels]? Maybe train the model with an in-memory dataset
instead of an RDD? Call sc.parallelize on the Iterable values in a groupBy
to create a mini-RDD?

Has anyone else tried something like this with success?

Thanks!