Re: Maven out of memory error

2015-01-18 Thread Ted Yu
Yes.
That could be the cause.

On Sun, Jan 18, 2015 at 11:47 AM, Sean Owen  wrote:

> Oh: are you running the tests with a different profile setting than
> what the last assembly was built with? this particular test depends on
> those matching. Not 100% sure that's the problem, but a good guess.
>
> On Sat, Jan 17, 2015 at 4:54 PM, Ted Yu  wrote:
> > The test passed here:
> >
> >
> https://amplab.cs.berkeley.edu/jenkins/view/Spark/job/Spark-Master-Maven-with-YARN/HADOOP_PROFILE=hadoop-2.4,label=centos/1215/consoleFull
> >
> > It passed locally with the following command:
> >
> > mvn -DHADOOP_PROFILE=hadoop-2.4 -Phadoop-2.4 -Pyarn -Phive test
> > -Dtest=JavaAPISuite
> >
> > FYI
> >
> > On Sat, Jan 17, 2015 at 8:23 AM, Andrew Musselman
> >  wrote:
> >>
> >> Failing for me and another team member on the command line, for what
> it's
> >> worth.
> >>
> >> > On Jan 17, 2015, at 2:39 AM, Sean Owen  wrote:
> >> >
> >> > Hm, this test hangs for me in IntelliJ. It could be a real problem,
> >> > and a combination of a) just recently actually enabling Java tests, b)
> >> > recent updates to the complicated Guava shading situation.
> >> >
> >> > The manifestation of the error usually suggests that something totally
> >> > failed to start (because of, say, class incompatibility errors, etc.)
> >> > Thus things hang and time out waiting for the dead component. It's
> >> > sometimes hard to get answers from the embedded component that dies
> >> > though.
> >> >
> >> > That said, it seems to pass on the command line. For example my recent
> >> > Jenkins job shows it passes:
> >> >
> >> >
> https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/25682/consoleFull
> >> >
> >> > I'll try to uncover more later this weekend. Thoughts welcome though.
> >> >
> >> > On Fri, Jan 16, 2015 at 8:26 PM, Andrew Musselman
> >> >  wrote:
> >> >> Thanks Ted, got farther along but now have a failing test; is this a
> >> >> known
> >> >> issue?
> >> >>
> >> >> ---
> >> >> T E S T S
> >> >> ---
> >> >> Running org.apache.spark.JavaAPISuite
> >> >> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed:
> >> >> 123.462 sec
> >> >> <<< FAILURE! - in org.apache.spark.JavaAPISuite
> >> >> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5
> >> >> sec
> >> >> <<< ERROR!
> >> >> org.apache.spark.SparkException: Job aborted due to stage failure:
> >> >> Master
> >> >> removed our application: FAILED
> >> >>at
> >> >>
> >> >> org.apache.spark.scheduler.DAGScheduler.org
> $apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
> >> >>at
> >> >>
> >> >>
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
> >> >>at
> >> >> scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> >> >>at scala.Option.foreach(Option.scala:236)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
> >> >>at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
> >> >>at
> >> >>
> >> >>
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
> >> >>at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
> >> >>at akka.actor.ActorCell.invoke(ActorCell.scala:487)
> >> >>at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
> >> >>at akka.dispatch.Mailbox.run(Mailbox.scala:220)
> >> >>at
> >> >>
> >> >>
> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
> >> >>at
> >> >> scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
> >> >>at
> >> >>
> >> >>
> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
> >> >>at
> >> >>
> >> >>
> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
> >> >>at
> >> >>
> >> >>
> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
> >> >>
> >> >> Running org.apache.spark.JavaJdbcRDDSuite
> >> >> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846
> >> 

Re: Maven out of memory error

2015-01-18 Thread Sean Owen
Oh: are you running the tests with a different profile setting than
what the last assembly was built with? this particular test depends on
those matching. Not 100% sure that's the problem, but a good guess.

On Sat, Jan 17, 2015 at 4:54 PM, Ted Yu  wrote:
> The test passed here:
>
> https://amplab.cs.berkeley.edu/jenkins/view/Spark/job/Spark-Master-Maven-with-YARN/HADOOP_PROFILE=hadoop-2.4,label=centos/1215/consoleFull
>
> It passed locally with the following command:
>
> mvn -DHADOOP_PROFILE=hadoop-2.4 -Phadoop-2.4 -Pyarn -Phive test
> -Dtest=JavaAPISuite
>
> FYI
>
> On Sat, Jan 17, 2015 at 8:23 AM, Andrew Musselman
>  wrote:
>>
>> Failing for me and another team member on the command line, for what it's
>> worth.
>>
>> > On Jan 17, 2015, at 2:39 AM, Sean Owen  wrote:
>> >
>> > Hm, this test hangs for me in IntelliJ. It could be a real problem,
>> > and a combination of a) just recently actually enabling Java tests, b)
>> > recent updates to the complicated Guava shading situation.
>> >
>> > The manifestation of the error usually suggests that something totally
>> > failed to start (because of, say, class incompatibility errors, etc.)
>> > Thus things hang and time out waiting for the dead component. It's
>> > sometimes hard to get answers from the embedded component that dies
>> > though.
>> >
>> > That said, it seems to pass on the command line. For example my recent
>> > Jenkins job shows it passes:
>> >
>> > https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/25682/consoleFull
>> >
>> > I'll try to uncover more later this weekend. Thoughts welcome though.
>> >
>> > On Fri, Jan 16, 2015 at 8:26 PM, Andrew Musselman
>> >  wrote:
>> >> Thanks Ted, got farther along but now have a failing test; is this a
>> >> known
>> >> issue?
>> >>
>> >> ---
>> >> T E S T S
>> >> ---
>> >> Running org.apache.spark.JavaAPISuite
>> >> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed:
>> >> 123.462 sec
>> >> <<< FAILURE! - in org.apache.spark.JavaAPISuite
>> >> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5
>> >> sec
>> >> <<< ERROR!
>> >> org.apache.spark.SparkException: Job aborted due to stage failure:
>> >> Master
>> >> removed our application: FAILED
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
>> >>at
>> >>
>> >> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
>> >>at
>> >> scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>> >>at scala.Option.foreach(Option.scala:236)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
>> >>at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
>> >>at
>> >>
>> >> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
>> >>at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
>> >>at akka.actor.ActorCell.invoke(ActorCell.scala:487)
>> >>at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
>> >>at akka.dispatch.Mailbox.run(Mailbox.scala:220)
>> >>at
>> >>
>> >> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
>> >>at
>> >> scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
>> >>at
>> >>
>> >> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
>> >>at
>> >>
>> >> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
>> >>at
>> >>
>> >> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
>> >>
>> >> Running org.apache.spark.JavaJdbcRDDSuite
>> >> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846
>> >> sec -
>> >> in org.apache.spark.JavaJdbcRDDSuite
>> >>
>> >> Results :
>> >>
>> >>
>> >> Tests in error:
>> >>  JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage
>> >> failure:
>> >> Maste...
>> >>
>> >>> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
>> >>>
>> >>> Can you try doing this before running mvn ?
>> >>>
>> >>> export 

Re: Maven out of memory error

2015-01-17 Thread Ted Yu
The test passed here:

https://amplab.cs.berkeley.edu/jenkins/view/Spark/job/Spark-Master-Maven-with-YARN/HADOOP_PROFILE=hadoop-2.4,label=centos/1215/consoleFull

It passed locally with the following command:

mvn -DHADOOP_PROFILE=hadoop-2.4 -Phadoop-2.4 -Pyarn -Phive test
-Dtest=JavaAPISuite

FYI

On Sat, Jan 17, 2015 at 8:23 AM, Andrew Musselman <
andrew.mussel...@gmail.com> wrote:

> Failing for me and another team member on the command line, for what it's
> worth.
>
> > On Jan 17, 2015, at 2:39 AM, Sean Owen  wrote:
> >
> > Hm, this test hangs for me in IntelliJ. It could be a real problem,
> > and a combination of a) just recently actually enabling Java tests, b)
> > recent updates to the complicated Guava shading situation.
> >
> > The manifestation of the error usually suggests that something totally
> > failed to start (because of, say, class incompatibility errors, etc.)
> > Thus things hang and time out waiting for the dead component. It's
> > sometimes hard to get answers from the embedded component that dies
> > though.
> >
> > That said, it seems to pass on the command line. For example my recent
> > Jenkins job shows it passes:
> >
> https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/25682/consoleFull
> >
> > I'll try to uncover more later this weekend. Thoughts welcome though.
> >
> > On Fri, Jan 16, 2015 at 8:26 PM, Andrew Musselman
> >  wrote:
> >> Thanks Ted, got farther along but now have a failing test; is this a
> known
> >> issue?
> >>
> >> ---
> >> T E S T S
> >> ---
> >> Running org.apache.spark.JavaAPISuite
> >> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed:
> 123.462 sec
> >> <<< FAILURE! - in org.apache.spark.JavaAPISuite
> >> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5
> sec
> >> <<< ERROR!
> >> org.apache.spark.SparkException: Job aborted due to stage failure:
> Master
> >> removed our application: FAILED
> >>at
> >> org.apache.spark.scheduler.DAGScheduler.org
> $apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
> >>at
> >>
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
> >>at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> >>at scala.Option.foreach(Option.scala:236)
> >>at
> >>
> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
> >>at
> >>
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
> >>at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
> >>at
> >>
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
> >>at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
> >>at akka.actor.ActorCell.invoke(ActorCell.scala:487)
> >>at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
> >>at akka.dispatch.Mailbox.run(Mailbox.scala:220)
> >>at
> >>
> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
> >>at
> scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
> >>at
> >>
> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
> >>at
> >> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
> >>at
> >>
> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
> >>
> >> Running org.apache.spark.JavaJdbcRDDSuite
> >> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846
> sec -
> >> in org.apache.spark.JavaJdbcRDDSuite
> >>
> >> Results :
> >>
> >>
> >> Tests in error:
> >>  JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage
> failure:
> >> Maste...
> >>
> >>> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
> >>>
> >>> Can you try doing this before running mvn ?
> >>>
> >>> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
> >>> -XX:ReservedCodeCacheSize=512m"
> >>>
> >>> What OS are you using ?
> >>>
> >>> Cheers
> >>>
> >>> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman
> >>>  wrote:
> 
>  Just got the latest from Github and tried running `mvn test`; is this
>  error common and do you have any advice on fixing it?
> 
>  Thanks!
> 
>  [INFO] --- scala-maven-plugin:3.2.0:compil

Re: Maven out of memory error

2015-01-17 Thread Andrew Musselman
Failing for me and another team member on the command line, for what it's worth.

> On Jan 17, 2015, at 2:39 AM, Sean Owen  wrote:
> 
> Hm, this test hangs for me in IntelliJ. It could be a real problem,
> and a combination of a) just recently actually enabling Java tests, b)
> recent updates to the complicated Guava shading situation.
> 
> The manifestation of the error usually suggests that something totally
> failed to start (because of, say, class incompatibility errors, etc.)
> Thus things hang and time out waiting for the dead component. It's
> sometimes hard to get answers from the embedded component that dies
> though.
> 
> That said, it seems to pass on the command line. For example my recent
> Jenkins job shows it passes:
> https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/25682/consoleFull
> 
> I'll try to uncover more later this weekend. Thoughts welcome though.
> 
> On Fri, Jan 16, 2015 at 8:26 PM, Andrew Musselman
>  wrote:
>> Thanks Ted, got farther along but now have a failing test; is this a known
>> issue?
>> 
>> ---
>> T E S T S
>> ---
>> Running org.apache.spark.JavaAPISuite
>> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 123.462 sec
>> <<< FAILURE! - in org.apache.spark.JavaAPISuite
>> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5 sec
>> <<< ERROR!
>> org.apache.spark.SparkException: Job aborted due to stage failure: Master
>> removed our application: FAILED
>>at
>> org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
>>at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
>>at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
>>at
>> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
>>at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
>>at
>> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
>>at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>>at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>>at scala.Option.foreach(Option.scala:236)
>>at
>> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
>>at
>> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
>>at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
>>at
>> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
>>at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
>>at akka.actor.ActorCell.invoke(ActorCell.scala:487)
>>at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
>>at akka.dispatch.Mailbox.run(Mailbox.scala:220)
>>at
>> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
>>at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
>>at
>> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
>>at
>> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
>>at
>> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
>> 
>> Running org.apache.spark.JavaJdbcRDDSuite
>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846 sec -
>> in org.apache.spark.JavaJdbcRDDSuite
>> 
>> Results :
>> 
>> 
>> Tests in error:
>>  JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage failure:
>> Maste...
>> 
>>> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
>>> 
>>> Can you try doing this before running mvn ?
>>> 
>>> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
>>> -XX:ReservedCodeCacheSize=512m"
>>> 
>>> What OS are you using ?
>>> 
>>> Cheers
>>> 
>>> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman
>>>  wrote:
 
 Just got the latest from Github and tried running `mvn test`; is this
 error common and do you have any advice on fixing it?
 
 Thanks!
 
 [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
 spark-core_2.10 ---
 [WARNING] Zinc server is not available at port 3030 - reverting to normal
 incremental compile
 [INFO] Using incremental compilation
 [INFO] compiler plugin:
 BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
 [INFO] Compiling 400 Scala sources and 34 Java sources to
 /home/akm/spark/core/target/scala-2.10/classes...
 [WARNING]
 /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
 imported `DataReadMethod' is permanently hidden by definition of object
 DataReadMethod in package 

Re: Maven out of memory error

2015-01-17 Thread Sean Owen
Hm, this test hangs for me in IntelliJ. It could be a real problem,
and a combination of a) just recently actually enabling Java tests, b)
recent updates to the complicated Guava shading situation.

The manifestation of the error usually suggests that something totally
failed to start (because of, say, class incompatibility errors, etc.)
Thus things hang and time out waiting for the dead component. It's
sometimes hard to get answers from the embedded component that dies
though.

That said, it seems to pass on the command line. For example my recent
Jenkins job shows it passes:
https://amplab.cs.berkeley.edu/jenkins/job/SparkPullRequestBuilder/25682/consoleFull

I'll try to uncover more later this weekend. Thoughts welcome though.

On Fri, Jan 16, 2015 at 8:26 PM, Andrew Musselman
 wrote:
> Thanks Ted, got farther along but now have a failing test; is this a known
> issue?
>
> ---
>  T E S T S
> ---
> Running org.apache.spark.JavaAPISuite
> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 123.462 sec
> <<< FAILURE! - in org.apache.spark.JavaAPISuite
> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5 sec
> <<< ERROR!
> org.apache.spark.SparkException: Job aborted due to stage failure: Master
> removed our application: FAILED
> at
> org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
> at
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
> at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
> at
> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> at scala.Option.foreach(Option.scala:236)
> at
> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
> at
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
> at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
> at
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
> at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
> at akka.actor.ActorCell.invoke(ActorCell.scala:487)
> at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
> at akka.dispatch.Mailbox.run(Mailbox.scala:220)
> at
> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
> at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
> at
> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
> at
> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
> at
> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
>
> Running org.apache.spark.JavaJdbcRDDSuite
> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846 sec -
> in org.apache.spark.JavaJdbcRDDSuite
>
> Results :
>
>
> Tests in error:
>   JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage failure:
> Maste...
>
> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
>>
>> Can you try doing this before running mvn ?
>>
>> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
>> -XX:ReservedCodeCacheSize=512m"
>>
>> What OS are you using ?
>>
>> Cheers
>>
>> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman
>>  wrote:
>>>
>>> Just got the latest from Github and tried running `mvn test`; is this
>>> error common and do you have any advice on fixing it?
>>>
>>> Thanks!
>>>
>>> [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
>>> spark-core_2.10 ---
>>> [WARNING] Zinc server is not available at port 3030 - reverting to normal
>>> incremental compile
>>> [INFO] Using incremental compilation
>>> [INFO] compiler plugin:
>>> BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
>>> [INFO] Compiling 400 Scala sources and 34 Java sources to
>>> /home/akm/spark/core/target/scala-2.10/classes...
>>> [WARNING]
>>> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
>>> imported `DataReadMethod' is permanently hidden by definition of object
>>> DataReadMethod in package executor
>>> [WARNING] import org.apache.spark.executor.DataReadMethod
>>> [WARNING]  ^
>>> [WARNING]
>>> /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
>>> match may not be exhaustive.
>>> It wou

Re: Maven out of memory error

2015-01-16 Thread Ted Yu
I tried the following but still didn't see test output :-(

diff --git a/pom.xml b/pom.xml
index f4466e5..dae2ae8 100644
--- a/pom.xml
+++ b/pom.xml
@@ -1131,6 +1131,7 @@

 true
 
 false
+true
   
 
 

On Fri, Jan 16, 2015 at 12:41 PM, Ted Yu  wrote:

> I got the same error:
>
> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 261.111
> sec  <<< ERROR!
> org.apache.spark.SparkException: Job aborted due to stage failure: Master
> removed our application: FAILED
> at org.apache.spark.scheduler.DAGScheduler.org
> $apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
>
> Looking under ore/target/surefire-reports/ , I don't see test output.
> Trying to figure out how test output can be generated.
>
> Cheers
>
> On Fri, Jan 16, 2015 at 12:26 PM, Andrew Musselman <
> andrew.mussel...@gmail.com> wrote:
>
>> Thanks Ted, got farther along but now have a failing test; is this a
>> known issue?
>>
>> ---
>>  T E S T S
>> ---
>> Running org.apache.spark.JavaAPISuite
>> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 123.462
>> sec <<< FAILURE! - in org.apache.spark.JavaAPISuite
>> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5
>> sec  <<< ERROR!
>> org.apache.spark.SparkException: Job aborted due to stage failure: Master
>> removed our application: FAILED
>> at org.apache.spark.scheduler.DAGScheduler.org
>> $apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
>> at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
>> at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
>> at
>> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
>> at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
>> at
>> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
>> at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>> at
>> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
>> at scala.Option.foreach(Option.scala:236)
>> at
>> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
>> at
>> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
>> at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
>> at
>> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
>> at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
>> at akka.actor.ActorCell.invoke(ActorCell.scala:487)
>> at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
>> at akka.dispatch.Mailbox.run(Mailbox.scala:220)
>> at
>> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
>> at
>> scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
>> at
>> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
>> at
>> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
>> at
>> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
>>
>> Running org.apache.spark.JavaJdbcRDDSuite
>> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846 sec
>> - in org.apache.spark.JavaJdbcRDDSuite
>>
>> Results :
>>
>>
>> Tests in error:
>>   JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage
>> failure: Maste...
>>
>> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
>>
>>> Can you try doing this before running mvn ?
>>>
>>> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
>>> -XX:ReservedCodeCacheSize=512m"
>>>
>>> What OS are you using ?
>>>
>>> Cheers
>>>
>>> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman <
>>> andrew.mussel...@gmail.com> wrote:
>>>
 Just got the latest from Github and tried running `mvn test`; is this
 error common and do you have any advice on fixing it?

 Thanks!

 [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
 spark-core_2.10 ---
 [WARNING] Zinc server is not available at port 3030 - reverting to
 normal incremental compile
 [INFO] Using incremental compilation
 [INFO] compiler plugin:
 BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
 [INFO] Compiling 400 Scala sources and 34 Java sources to
 /home/akm/spark/core/target/scala-2.10/classes...
 [WARNING]
 /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
 imported `D

Re: Maven out of memory error

2015-01-16 Thread Ted Yu
I got the same error:

testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 261.111 sec
 <<< ERROR!
org.apache.spark.SparkException: Job aborted due to stage failure: Master
removed our application: FAILED
at org.apache.spark.scheduler.DAGScheduler.org
$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)

Looking under ore/target/surefire-reports/ , I don't see test output.
Trying to figure out how test output can be generated.

Cheers

On Fri, Jan 16, 2015 at 12:26 PM, Andrew Musselman <
andrew.mussel...@gmail.com> wrote:

> Thanks Ted, got farther along but now have a failing test; is this a known
> issue?
>
> ---
>  T E S T S
> ---
> Running org.apache.spark.JavaAPISuite
> Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 123.462
> sec <<< FAILURE! - in org.apache.spark.JavaAPISuite
> testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5 sec
> <<< ERROR!
> org.apache.spark.SparkException: Job aborted due to stage failure: Master
> removed our application: FAILED
> at org.apache.spark.scheduler.DAGScheduler.org
> $apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
> at
> scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
> at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
> at
> org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> at
> org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
> at scala.Option.foreach(Option.scala:236)
> at
> org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
> at
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
> at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
> at
> org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
> at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
> at akka.actor.ActorCell.invoke(ActorCell.scala:487)
> at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
> at akka.dispatch.Mailbox.run(Mailbox.scala:220)
> at
> akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
> at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
> at
> scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
> at
> scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
> at
> scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)
>
> Running org.apache.spark.JavaJdbcRDDSuite
> Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846 sec
> - in org.apache.spark.JavaJdbcRDDSuite
>
> Results :
>
>
> Tests in error:
>   JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage failure:
> Maste...
>
> On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:
>
>> Can you try doing this before running mvn ?
>>
>> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
>> -XX:ReservedCodeCacheSize=512m"
>>
>> What OS are you using ?
>>
>> Cheers
>>
>> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman <
>> andrew.mussel...@gmail.com> wrote:
>>
>>> Just got the latest from Github and tried running `mvn test`; is this
>>> error common and do you have any advice on fixing it?
>>>
>>> Thanks!
>>>
>>> [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
>>> spark-core_2.10 ---
>>> [WARNING] Zinc server is not available at port 3030 - reverting to
>>> normal incremental compile
>>> [INFO] Using incremental compilation
>>> [INFO] compiler plugin:
>>> BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
>>> [INFO] Compiling 400 Scala sources and 34 Java sources to
>>> /home/akm/spark/core/target/scala-2.10/classes...
>>> [WARNING]
>>> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
>>> imported `DataReadMethod' is permanently hidden by definition of object
>>> DataReadMethod in package executor
>>> [WARNING] import org.apache.spark.executor.DataReadMethod
>>> [WARNING]  ^
>>> [WARNING]
>>> /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
>>> match may not be exhaustive.
>>> It would fail on the following input: TASK_ERROR
>>> [WARNING]   def fromMesos(mesosState: MesosTaskSt

Re: Maven out of memory error

2015-01-16 Thread Andrew Musselman
Thanks Sean

On Fri, Jan 16, 2015 at 12:06 PM, Sean Owen  wrote:

> Hey Andrew, you'll want to have a look at the Spark docs on building:
> http://spark.apache.org/docs/latest/building-spark.html
>
> It's the first thing covered there.
>
> The warnings are normal as you are probably building with newer Hadoop
> profiles and so old-Hadoop support code shows deprecation warnings on
> its use of old APIs.
>
> On Fri, Jan 16, 2015 at 8:03 PM, Andrew Musselman
>  wrote:
> > Just got the latest from Github and tried running `mvn test`; is this
> error
> > common and do you have any advice on fixing it?
> >
> > Thanks!
> >
> > [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
> > spark-core_2.10 ---
> > [WARNING] Zinc server is not available at port 3030 - reverting to normal
> > incremental compile
> > [INFO] Using incremental compilation
> > [INFO] compiler plugin:
> > BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
> > [INFO] Compiling 400 Scala sources and 34 Java sources to
> > /home/akm/spark/core/target/scala-2.10/classes...
> > [WARNING]
> >
> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
> > imported `DataReadMethod' is permanently hidden by definition of object
> > DataReadMethod in package executor
> > [WARNING] import org.apache.spark.executor.DataReadMethod
> > [WARNING]  ^
> > [WARNING]
> > /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
> > match may not be exhaustive.
> > It would fail on the following input: TASK_ERROR
> > [WARNING]   def fromMesos(mesosState: MesosTaskState): TaskState =
> > mesosState match {
> > [WARNING]  ^
> > [WARNING]
> >
> /home/akm/spark/core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala:89:
> > method isDirectory in class FileSystem is deprecated: see corresponding
> > Javadoc for more information.
> > [WARNING] if (!fileSystem.isDirectory(new Path(logBaseDir))) {
> > [WARNING] ^
> > [ERROR] PermGen space -> [Help 1]
> > [ERROR]
> > [ERROR] To see the full stack trace of the errors, re-run Maven with the
> -e
> > switch.
> > [ERROR] Re-run Maven using the -X switch to enable full debug logging.
> > [ERROR]
> > [ERROR] For more information about the errors and possible solutions,
> please
> > read the following articles:
> > [ERROR] [Help 1]
> > http://cwiki.apache.org/confluence/display/MAVEN/OutOfMemoryError
> >
>


Re: Maven out of memory error

2015-01-16 Thread Andrew Musselman
Thanks Ted, got farther along but now have a failing test; is this a known
issue?

---
 T E S T S
---
Running org.apache.spark.JavaAPISuite
Tests run: 72, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 123.462
sec <<< FAILURE! - in org.apache.spark.JavaAPISuite
testGuavaOptional(org.apache.spark.JavaAPISuite)  Time elapsed: 106.5 sec
<<< ERROR!
org.apache.spark.SparkException: Job aborted due to stage failure: Master
removed our application: FAILED
at org.apache.spark.scheduler.DAGScheduler.org
$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1199)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1188)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1187)
at
scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
at
org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1187)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
at
org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:697)
at scala.Option.foreach(Option.scala:236)
at
org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:697)
at
org.apache.spark.scheduler.DAGSchedulerEventProcessActor$$anonfun$receive$2.applyOrElse(DAGScheduler.scala:1399)
at akka.actor.Actor$class.aroundReceive(Actor.scala:465)
at
org.apache.spark.scheduler.DAGSchedulerEventProcessActor.aroundReceive(DAGScheduler.scala:1360)
at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516)
at akka.actor.ActorCell.invoke(ActorCell.scala:487)
at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238)
at akka.dispatch.Mailbox.run(Mailbox.scala:220)
at
akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:393)
at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)
at
scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)
at
scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)
at
scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)

Running org.apache.spark.JavaJdbcRDDSuite
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.846 sec -
in org.apache.spark.JavaJdbcRDDSuite

Results :


Tests in error:
  JavaAPISuite.testGuavaOptional » Spark Job aborted due to stage failure:
Maste...

On Fri, Jan 16, 2015 at 12:06 PM, Ted Yu  wrote:

> Can you try doing this before running mvn ?
>
> export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
> -XX:ReservedCodeCacheSize=512m"
>
> What OS are you using ?
>
> Cheers
>
> On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman <
> andrew.mussel...@gmail.com> wrote:
>
>> Just got the latest from Github and tried running `mvn test`; is this
>> error common and do you have any advice on fixing it?
>>
>> Thanks!
>>
>> [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
>> spark-core_2.10 ---
>> [WARNING] Zinc server is not available at port 3030 - reverting to normal
>> incremental compile
>> [INFO] Using incremental compilation
>> [INFO] compiler plugin:
>> BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
>> [INFO] Compiling 400 Scala sources and 34 Java sources to
>> /home/akm/spark/core/target/scala-2.10/classes...
>> [WARNING]
>> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
>> imported `DataReadMethod' is permanently hidden by definition of object
>> DataReadMethod in package executor
>> [WARNING] import org.apache.spark.executor.DataReadMethod
>> [WARNING]  ^
>> [WARNING]
>> /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
>> match may not be exhaustive.
>> It would fail on the following input: TASK_ERROR
>> [WARNING]   def fromMesos(mesosState: MesosTaskState): TaskState =
>> mesosState match {
>> [WARNING]  ^
>> [WARNING]
>> /home/akm/spark/core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala:89:
>> method isDirectory in class FileSystem is deprecated: see corresponding
>> Javadoc for more information.
>> [WARNING] if (!fileSystem.isDirectory(new Path(logBaseDir))) {
>> [WARNING] ^
>> [ERROR] PermGen space -> [Help 1]
>> [ERROR]
>> [ERROR] To see the full stack trace of the errors, re-run Maven with the
>> -e switch.
>> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
>> [ERROR]
>> [ERROR] For more information about the errors and possible solutions,
>> please read the following articles:
>> [ERROR] [Help 1]
>> http://cwiki.apache.org/confluence/dis

Re: Maven out of memory error

2015-01-16 Thread Ted Yu
Can you try doing this before running mvn ?

export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=512M
-XX:ReservedCodeCacheSize=512m"

What OS are you using ?

Cheers

On Fri, Jan 16, 2015 at 12:03 PM, Andrew Musselman <
andrew.mussel...@gmail.com> wrote:

> Just got the latest from Github and tried running `mvn test`; is this
> error common and do you have any advice on fixing it?
>
> Thanks!
>
> [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
> spark-core_2.10 ---
> [WARNING] Zinc server is not available at port 3030 - reverting to normal
> incremental compile
> [INFO] Using incremental compilation
> [INFO] compiler plugin:
> BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
> [INFO] Compiling 400 Scala sources and 34 Java sources to
> /home/akm/spark/core/target/scala-2.10/classes...
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
> imported `DataReadMethod' is permanently hidden by definition of object
> DataReadMethod in package executor
> [WARNING] import org.apache.spark.executor.DataReadMethod
> [WARNING]  ^
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
> match may not be exhaustive.
> It would fail on the following input: TASK_ERROR
> [WARNING]   def fromMesos(mesosState: MesosTaskState): TaskState =
> mesosState match {
> [WARNING]  ^
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala:89:
> method isDirectory in class FileSystem is deprecated: see corresponding
> Javadoc for more information.
> [WARNING] if (!fileSystem.isDirectory(new Path(logBaseDir))) {
> [WARNING] ^
> [ERROR] PermGen space -> [Help 1]
> [ERROR]
> [ERROR] To see the full stack trace of the errors, re-run Maven with the
> -e switch.
> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
> [ERROR]
> [ERROR] For more information about the errors and possible solutions,
> please read the following articles:
> [ERROR] [Help 1]
> http://cwiki.apache.org/confluence/display/MAVEN/OutOfMemoryError
>
>


Re: Maven out of memory error

2015-01-16 Thread Sean Owen
Hey Andrew, you'll want to have a look at the Spark docs on building:
http://spark.apache.org/docs/latest/building-spark.html

It's the first thing covered there.

The warnings are normal as you are probably building with newer Hadoop
profiles and so old-Hadoop support code shows deprecation warnings on
its use of old APIs.

On Fri, Jan 16, 2015 at 8:03 PM, Andrew Musselman
 wrote:
> Just got the latest from Github and tried running `mvn test`; is this error
> common and do you have any advice on fixing it?
>
> Thanks!
>
> [INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
> spark-core_2.10 ---
> [WARNING] Zinc server is not available at port 3030 - reverting to normal
> incremental compile
> [INFO] Using incremental compilation
> [INFO] compiler plugin:
> BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
> [INFO] Compiling 400 Scala sources and 34 Java sources to
> /home/akm/spark/core/target/scala-2.10/classes...
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
> imported `DataReadMethod' is permanently hidden by definition of object
> DataReadMethod in package executor
> [WARNING] import org.apache.spark.executor.DataReadMethod
> [WARNING]  ^
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
> match may not be exhaustive.
> It would fail on the following input: TASK_ERROR
> [WARNING]   def fromMesos(mesosState: MesosTaskState): TaskState =
> mesosState match {
> [WARNING]  ^
> [WARNING]
> /home/akm/spark/core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala:89:
> method isDirectory in class FileSystem is deprecated: see corresponding
> Javadoc for more information.
> [WARNING] if (!fileSystem.isDirectory(new Path(logBaseDir))) {
> [WARNING] ^
> [ERROR] PermGen space -> [Help 1]
> [ERROR]
> [ERROR] To see the full stack trace of the errors, re-run Maven with the -e
> switch.
> [ERROR] Re-run Maven using the -X switch to enable full debug logging.
> [ERROR]
> [ERROR] For more information about the errors and possible solutions, please
> read the following articles:
> [ERROR] [Help 1]
> http://cwiki.apache.org/confluence/display/MAVEN/OutOfMemoryError
>

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Maven out of memory error

2015-01-16 Thread Andrew Musselman
Just got the latest from Github and tried running `mvn test`; is this error
common and do you have any advice on fixing it?

Thanks!

[INFO] --- scala-maven-plugin:3.2.0:compile (scala-compile-first) @
spark-core_2.10 ---
[WARNING] Zinc server is not available at port 3030 - reverting to normal
incremental compile
[INFO] Using incremental compilation
[INFO] compiler plugin:
BasicArtifact(org.scalamacros,paradise_2.10.4,2.0.1,null)
[INFO] Compiling 400 Scala sources and 34 Java sources to
/home/akm/spark/core/target/scala-2.10/classes...
[WARNING]
/home/akm/spark/core/src/main/scala/org/apache/spark/executor/TaskMetrics.scala:22:
imported `DataReadMethod' is permanently hidden by definition of object
DataReadMethod in package executor
[WARNING] import org.apache.spark.executor.DataReadMethod
[WARNING]  ^
[WARNING]
/home/akm/spark/core/src/main/scala/org/apache/spark/TaskState.scala:41:
match may not be exhaustive.
It would fail on the following input: TASK_ERROR
[WARNING]   def fromMesos(mesosState: MesosTaskState): TaskState =
mesosState match {
[WARNING]  ^
[WARNING]
/home/akm/spark/core/src/main/scala/org/apache/spark/scheduler/EventLoggingListener.scala:89:
method isDirectory in class FileSystem is deprecated: see corresponding
Javadoc for more information.
[WARNING] if (!fileSystem.isDirectory(new Path(logBaseDir))) {
[WARNING] ^
[ERROR] PermGen space -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e
switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions,
please read the following articles:
[ERROR] [Help 1]
http://cwiki.apache.org/confluence/display/MAVEN/OutOfMemoryError