[Wien] Reg: BerryPI calculation

2013-10-13 Thread Shwetha Gummula
Dear Wien2k users and developers,
   I want to calculate the Born effective charges by using the
BerryPI code which is in interface with the wien2k. I have successfully
installed and ran the examples. In order to calculate the Born effective
charges of particular atom in particular direction we have the change the
position of that particular element in the particular direction.  But my
question is for my compound which is tetragonal structure (ABO4 type), for
particular atom A it created equivalent atoms.
Ex:ATOM  -1: X=0. Y=0.7500 Z=0.3750
  MULT= 2  ISPLIT=-2
  -1: X=0. Y=0.2500 Z=0.6250
A NPT=  781  R0=0.0500 RMT=2.1200   Z:
 if i change the position of one atom while initializing it is giving error
about the other equivalent position where there position also have to
change.
Ex:ATOM  -1: X=0. Y=0.7500 Z=0.3650
  MULT= 2  ISPLIT=-2
  -1: X=0. Y=0.2500 Z=0.6250
A NPT=  781  R0=0.0500 RMT=2.1200   Z:

In order to change the position (or perturb) do i have to create the again
in w2web page with the perturbed positions (A (0 0.75, 0.365)). What will
be the correct procedure. How to create the non equivalent positions for
every element so that we can easily perturb the positions. please can
anyone help me regarding this.
Thanking you
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Re: [Wien] Reg: BerryPI calculation

2013-10-13 Thread Sheikh Jamil Ahmed
You can create non equivalent atoms using the w2web interface.  You have to
use the split options to divide the two equivalent positions of Atom 1
into two different atoms. And then label them as 1 and 2 which will make
sure that the symmetry operation doesn't realize that you have two
equivalent positions. Then you can go on to compute the effective charge
for atom 1.

Alternatively, on your current structure both the atoms are equivalent
which means they will have the same effective charge. So, I would suggest
that instead of displacing just one atomic positions if you use identical
displacement for the both positions, you can compute sum of the effective
charges for the two equivalent atoms without any errors. Then you just have
to average them.

PS: make sure that you lattice vectors are orthogonal. BerryPI doesn't yet
have the capability to compute polarization for non orthogonal case.

Hope that will help.

Sheikh


On Sun, Oct 13, 2013 at 5:26 AM, Shwetha Gummula
shwetha.gumm...@gmail.comwrote:

 Dear Wien2k users and developers,
I want to calculate the Born effective charges by using the
 BerryPI code which is in interface with the wien2k. I have successfully
 installed and ran the examples. In order to calculate the Born effective
 charges of particular atom in particular direction we have the change the
 position of that particular element in the particular direction.  But my
 question is for my compound which is tetragonal structure (ABO4 type), for
 particular atom A it created equivalent atoms.
 Ex:ATOM  -1: X=0. Y=0.7500 Z=0.3750
   MULT= 2  ISPLIT=-2
   -1: X=0. Y=0.2500 Z=0.6250
 A NPT=  781  R0=0.0500 RMT=2.1200   Z:
  if i change the position of one atom while initializing it is giving
 error about the other equivalent position where there position also have to
 change.
 Ex:ATOM  -1: X=0. Y=0.7500 Z=0.3650
   MULT= 2  ISPLIT=-2
   -1: X=0. Y=0.2500 Z=0.6250
 A NPT=  781  R0=0.0500 RMT=2.1200   Z:

 In order to change the position (or perturb) do i have to create the again
 in w2web page with the perturbed positions (A (0 0.75, 0.365)). What will
 be the correct procedure. How to create the non equivalent positions for
 every element so that we can easily perturb the positions. please can
 anyone help me regarding this.
 Thanking you

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 SEARCH the MAILING-LIST at:
 http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html


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