Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Bruno Chareyre posted a new comment: Hi Son, As advised some time ago downloading the zip tarball is the last thing you want to do. I again suggest to checkout using git. Also yadedaily should have the TWOPHASEFLOW feature enabled in latest versions, so you don't really need to compile, hopefully. Cheers Bruno -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Son Pham Thai posted a new comment: Hi, Sorry for the late reply, I just had a meeting. I have also tried installing Yade in another PC (with Ubuntu 14.04) and I got the same error. I just want to know what my mistake is. Thank you all for your time and advise! Cheers, Son -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed:
https://answers.launchpad.net/yade/+question/668081
Status: Open => Answered
Jan Stránský proposed the following answer:
> My initial desire is how to fix the error of this "plot" function.
you need to define plot.plots before:
from yade import plot
plot.plots = {'x':'y'} # or something else, see [1]
Jan
[1] https://yade-dem.org/doc/user.html#plotting-variables
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Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed:
https://answers.launchpad.net/yade/+question/668081
Status: Answered => Open
Son Pham Thai is still having a problem:
Hi Jérôme,
Thank you for the YADE installation clarification and I am sorry for my
wrong description regarding "yade-daily package".
Considering the YADE version I have now:
$ ./yade-Unknown
Welcome to Yade Unknown
DEBUG /home/son/Desktop/myYade/trunk/core/Omega.hpp:106 Omega:
Constructing Omega.
DEBUG /home/son/Desktop/myYade/trunk/core/Omega.cpp:209 loadPlugins:
Loading plugin /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu
/yade-Unknown/libyade.so
DEBUG /home/son/Desktop/myYade/trunk/core/Omega.cpp:134
buildDynlibDatabase: called with 299 plugins.
...
DEBUG /home/son/Desktop/myYade/trunk/pkg/dem/FlatGridCollider.cpp:44
initIndices: sphereIdx=1
DEBUG /home/son/Desktop/myYade/trunk/pkg/dem/FlatGridCollider.cpp:44
initIndices: sphereIdx=1
TCP python prompt on localhost:9000, auth cookie `eyuscd'
XMLRPC info provider on http://localhost:21000
[[ ^L clears screen, ^U kills line. F8 plot. ]]
And by the way, when I press F8, I got this error:
Yade [1]: import yade.plot; yade.plot.plot();
---
IndexErrorTraceback (most recent call last)
/home/son/Desktop/myYade/install/bin/yade-Unknown in ()
> 1 import yade.plot; yade.plot.plot();
/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-Unknown/py/yade/plot.pyc
in plot(noShow, subPlots)
595 global currLineRefs
596 figs=set([l.line.axes.get_figure() for l in currLineRefs])
--> 597 if not hasattr(list(figs)[0],'show') and not noShow:
598 import warnings
599 warnings.warn('plot.plot not showing figure (matplotlib
using headless backend?)')
IndexError: list index out of range
My initial desire is how to fix the error of this "plot" function.
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Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Jan Stránský posted a new comment: Concerning your errors, I don't know how to fix them, please open a new question with the problem compiling with -DUSE_QT5=ON. Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Jérôme Duriez proposed the following answer: For further clarification Son, what we refer to with "yade-daily package" is a Yade version that Linux users can install without compiling anything, using classical Linux package management tools (like apt-get, ..) That corresponds to https://yade-dem.org/doc/installation.html#packages (and only this "Packages" part of the installation webpage) All installation instructions starting from https://yade- dem.org/doc/installation.html#source-code refer to an installation through source code compilation. You got this source code in the zip file you downloaded from gitHub. Lastly, your "unknown" is not the "version" of your Yade, it's just a suffix appended to the Yade executable (Python script, actually) and that you could specify during compilation process (but you did not, thus "unknown") What we actually call Yade version is what Yade (whatever the installation method) outputs at startup. Give a closer look to your terminal and you should see something like Jan mentioned in #6, eg 2018.02b-75-657a5bd~xenial. This reflects the development stage that is behind your Yade program, and is supposed to change with time (if you update your yade* packages, or if you download in a couple of weeks another zip file from gitHub) -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Son Pham Thai posted a new comment: Hi Jan, When I recompiled with -DUSE_QT5=ON, I got cmake error: CMake Error at CMakeLists.txt:246 (FIND_PACKAGE): Could not find a package configuration file provided by "Qt5" with any of the following names: Qt5Config.cmake qt5-config.cmake Add the installation prefix of "Qt5" to CMAKE_PREFIX_PATH or set "Qt5_DIR" to a directory containing one of the above files. If "Qt5" provides a separate development package or SDK, be sure it has been installed. -- Configuring incomplete, errors occurred! You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Jan Stránský requested more information: Thanks for clarification, now it is clear that what you use is not "Yade-daily package" :-) Is it possible for you to try to recompile with -DUSE_QT5=ON ? cheers Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Son Pham Thai posted a new comment: Hi Jan, 1. What I have done: sudo add-apt-repository ppa:yade-users/external sudo apt-get update sudo apt-get install cmake git freeglut3-dev libloki-dev \ libboost-all-dev fakeroot dpkg-dev build-essential g++ \ python-dev ipython python-matplotlib libsqlite3-dev python-numpy python-tk gnuplot \ libgts-dev python-pygraphviz libvtk6-dev python-numpy libeigen3-dev \ python-xlib python-pyqt5 pyqt5-dev-tools python-pyqt5.qtwebkit gtk2-engines-pixbuf python-argparse \ libqglviewer-dev python-imaging libjs-jquery python-sphinx python-git python-bibtex \ libxmu-dev libxi-dev libcgal-dev help2man libbz2-dev zlib1g-dev python-minieigen (after this command, i got: Note, selecting 'libpython2.7-stdlib' instead of 'python-argparse' E: Unable to locate package python-pyqt5 E: Unable to locate package python-pyqt5.qtwebkit E: Couldn't find any package by regex 'python-pyqt5.qtwebkit' sudo apt-get install python-gts sudo apt-get install libopenblas-dev libsuitesparse-metis-dev sudo add-apt-repository ppa:yade-users/external sudo apt-get update My folder structure: myYade/ trunk/ ## downloaded from https://github.com/yade/trunk build/ ## install/ ## initially is a blank folder cd Desktop/myYade/build cmake -DCMAKE_INSTALL_PREFIX=/home/son/Desktop/myYade/install /home/son/Desktop/myYade/trunk -DUSE_QT5=OFF -DTWOPHASEFLOW=ON -DDEBUG=ON make -j4 make install cd cd Desktop/myYade/install/bin ./yade-Unknown 2. When I installed default Ubuntu yade by: sudo apt-get install yade Then I got no error with those plot commands: -> [4]: [] -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Jan Stránský requested more information: Ok, now I am a bit confused: > I am using Ubuntu 16.04 and Yade-daily package. > I followed this instruction: > https://yade-dem.org/doc/installation.html#compilation > I downloaded the zip file from : https://github.com/yade/trunk > and then exact that zip file to my "trunk" folder. > By doing this, I got version id for my Yade as "Unknown" These two your statements are completely different. Please describe more how you installed the problematic version of yade and how you run it.. Another test, if you install default Ubuntu yade sudo apt-get install yade start "yade" in terminal and use those commands, do you still have the error? cheers Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Son Pham Thai posted a new comment: Hi Jan, I followed this instruction: https://yade-dem.org/doc/installation.html#compilation I downloaded the zip file from : https://github.com/yade/trunk and then exact that zip file to my "trunk" folder. By doing this, I got version id for my Yade as "Unknown" -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Jan Stránský requested more information: What is the version of your yadedaily? i.e. if you start it, it writes (in my case which works) "Welcome to Yade 2018.02b-75-657a5bd~xenial" thanks Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Son Pham Thai posted a new comment: Hi Jérôme, Using ipython, I got no error: Out[4]: [] -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Status: Open => Answered Jérôme Duriez proposed the following answer: Hi, What happens if you launch these commands directly in Python ? (Eg ask for "ipython" instead of "yadedaily" in your terminal, then type the commands you mentioned) -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Status: Solved => Open Son Pham Thai is still having a problem: Hi, What a shame on me, I just realized that I was in my Ubuntu 14 OS (not Ubuntu 16), that's why I did not have the mentioned problem. The problem in Ubuntu 16 is still there. @Jan, I did not run any code before, just fresh start Yade and run that code and got the above error. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Status: Needs information => Solved Son Pham Thai confirmed that the question is solved: Hi Jan, I used Ubuntu 14.04 and there was no problem. When I install Ubuntu 16 and install Yade, I got this problem. I have tried again and I think the problem could somehow relate to this (part of instruction for installation in [1]): sudo apt-get install cmake git freeglut3-dev libloki-dev \ libboost-all-dev fakeroot dpkg-dev build-essential g++ \ python-dev ipython python-matplotlib libsqlite3-dev python-numpy python-tk gnuplot \ libgts-dev python-pygraphviz libvtk6-dev python-numpy libeigen3-dev \ python-xlib python-pyqt5 pyqt5-dev-tools python-pyqt5.qtwebkit gtk2-engines-pixbuf python-argparse \ libqglviewer-dev python-imaging libjs-jquery python-sphinx python-git python-bibtex \ libxmu-dev libxi-dev libcgal-dev help2man libbz2-dev zlib1g-dev python-minieigen I try re-running this command again with separated line (not using \ anymore) and the problem with plot function is gone. [1]. https://yade-dem.org/doc/installation.html My problem has been solved. Thank you ;) Son -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #668081]: Problem with matplotlib.pyplot
Question #668081 on Yade changed: https://answers.launchpad.net/yade/+question/668081 Status: Open => Needs information Jan Stránský requested more information: Hello, on Ubuntu 16.04 I just installed yadedaily, tried your code, but got no error.. Do you run any code before these instructions, or you get the error in fresh yadedaily session? cheers Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
