[aroma.affymetrix] Re: use Hapmap data as reference for affy 6.0 data

2008-09-18 Thread marco
Dear All, along a similar line I have the following question. The standard for aroma.affymetrix (and other software) is to use as reference the robust average across the sample. I wonder if there is a rule of the thumb for how many arrays make a good reference? In the vignette 6 arrays are

[aroma.affymetrix] Re: use Hapmap data as reference for affy 6.0 data

2008-09-18 Thread Henrik Bengtsson
Hi. On Thu, Sep 18, 2008 at 5:10 AM, marco [EMAIL PROTECTED] wrote: Dear All, along a similar line I have the following question. The standard for aroma.affymetrix (and other software) is to use as reference the robust average across the sample. I wonder if there is a rule of the thumb