Re: [aroma.affymetrix] segfault while fitting plm in copy number processing using CRMAv2 algorithm

2010-05-11 Thread Henrik Bengtsson
- AffymetrixCelSet$byName(HapMap500K,Sty, cdf=cdf) acc - AllelicCrosstalkCalibration(csR, model=CRMAv2) csC - process(acc, verbose=verbose) 20100511 10:22:21|Calibrating data set for allelic cross talk... 20100511 10:22:31| Already calibrated 20100511 10:22:31|Calibrating data set for allelic cross talk

[aroma.affymetrix] CRMA v2 errors

2010-05-11 Thread Smaug72
Dear Henrik Bengtsson, we would like to use the CRMA v2 for our work. Unfortunately we receive errors. First we use a Linux system (Suse 11.2). I installed R (version 2.11.0) without any problems. Afterwards I followed your instructions on your webpage (http://aroma- project.org/install) to

Re: [aroma.affymetrix] CRMA v2 errors

2010-05-11 Thread Henrik Bengtsson
Hi. On Tue, May 11, 2010 at 2:42 PM, Smaug72 leber.mar...@gmx.de wrote: Dear Henrik Bengtsson, we would like to use the CRMA v2 for our work. Unfortunately we receive errors. First we use a Linux system (Suse 11.2). I installed R (version 2.11.0) without any problems. Afterwards I