[aroma.affymetrix] GenomeWideSNP_6 annotation file acquisition issues

Hi all, I am setting up to run analysis on Affymetrix SNP6, 250K Nsp and 250K Sty chip types. As I read through the current documentation, I've noticed the following items that may need attention, or I might need clarification: On page http://aroma-project.org/chipTypes/GenomeWideSNP_6

Re: [aroma.affymetrix] GenomeWideSNP_6 annotation file acquisition issues

Hi. On Thu, Dec 1, 2011 at 12:40 PM, Steven McKinney smckin...@bccrc.ca wrote: Hi all, I am setting up to run analysis on Affymetrix SNP6, 250K Nsp and 250K Sty chip types. As I read through the current documentation, I've noticed the following items that may need attention, or I might

RE: [aroma.affymetrix] GenomeWideSNP_6 annotation file acquisition issues

Thank you Henrik Indeed the file GenomeWideSNP_6.Full.CDF is in the genomewidesnp6_libraryfile.zip on the Affymetrix website (it is still the same Apr 13 2007 file). Best Steve -Original Message- From: aroma-affymetrix@googlegroups.com [mailto:aroma- affymet...@googlegroups.com] On

Re: [aroma.affymetrix] question about HuGene-1_0-st-v1 gene centric data

Hi. On Wed, Nov 30, 2011 at 6:38 PM, xiaowei guan xwei.g...@gmail.com wrote: Hello Henrik, May I ask you a question about using the http://www.aroma-project.org/node/38 Vignette to derive the gene centric values for HuGene-1_0-st-v1 array? I follow the command, but it only generated the