Hi,
sorry for the delay. The problem with hyper-segmentation is really an
issue post CRMAv2 preprocessing. By the "broadinstitute copy number
pipeline", do you mean
http://www.broadinstitute.org/cancer/software/genepattern/modules/snp6copynumberpipeline
If so, then they're doing two things bef
Hi.
On Thu, Dec 26, 2013 at 12:47 PM, Sam Danziger wrote:
> I'm using FIRMA algorithm, and I would like to use an existing FIRMA model
> (for instance one trained on 50 arrays) on new data (e.g. 2 new arrays).
>
> I am able to train a FIRMA model (and an RMA model) quite easily using the
> doFIRM
