Re: [aroma.affymetrix] After running doCRMAv2, I got chromosome 24,25

2015-02-09 Thread Chengyu Liu
Thanks Henrik~!

On Wednesday, February 4, 2015 at 11:47:55 PM UTC+2, Henrik Bengtsson wrote:
>
> Chr 23 = Chr X 
> Chr 24 = Chr Y 
> Chr 25 = Chr M (Mitochondrial) 
>
> /Henrik 
>
> On Wed, Feb 4, 2015 at 12:27 AM, Chengyu Liu  > wrote: 
> > Hi, 
> > 
> > After I ran doCRMAv2, and exported the raw copy number. Everything is ok 
> but 
> > there are chromosome 24 and 25. I suppose 23 is chromosome X.I do not 
> > understand why are 24 and 25 chromosomes from? 
> > I am using CytoScan HD array 
> > 
> > Br, 
> > Chengyu 
> > 
> > -- 
> > -- 
> > When reporting problems on aroma.affymetrix, make sure 1) to run the 
> latest 
> > version of the package, 2) to report the output of sessionInfo() and 
> > traceback(), and 3) to post a complete code example. 
> > 
> > 
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version of the package, 2) to report the output of sessionInfo() and 
traceback(), and 3) to post a complete code example.


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Re: [aroma.affymetrix] After running doCRMAv2, I got chromosome 24,25

2015-02-04 Thread Henrik Bengtsson
Chr 23 = Chr X
Chr 24 = Chr Y
Chr 25 = Chr M (Mitochondrial)

/Henrik

On Wed, Feb 4, 2015 at 12:27 AM, Chengyu Liu  wrote:
> Hi,
>
> After I ran doCRMAv2, and exported the raw copy number. Everything is ok but
> there are chromosome 24 and 25. I suppose 23 is chromosome X.I do not
> understand why are 24 and 25 chromosomes from?
> I am using CytoScan HD array
>
> Br,
> Chengyu
>
> --
> --
> When reporting problems on aroma.affymetrix, make sure 1) to run the latest
> version of the package, 2) to report the output of sessionInfo() and
> traceback(), and 3) to post a complete code example.
>
>
> You received this message because you are subscribed to the Google Groups
> "aroma.affymetrix" group with website http://www.aroma-project.org/.
> To post to this group, send email to aroma-affymetrix@googlegroups.com
> To unsubscribe and other options, go to http://www.aroma-project.org/forum/
>
> ---
> You received this message because you are subscribed to the Google Groups
> "aroma.affymetrix" group.
> To unsubscribe from this group and stop receiving emails from it, send an
> email to aroma-affymetrix+unsubscr...@googlegroups.com.
> For more options, visit https://groups.google.com/d/optout.

-- 
-- 
When reporting problems on aroma.affymetrix, make sure 1) to run the latest 
version of the package, 2) to report the output of sessionInfo() and 
traceback(), and 3) to post a complete code example.


You received this message because you are subscribed to the Google Groups 
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