Re: [aroma.affymetrix] Re: Problem in MSCN : Error in smooth.spline(sKK, lambda, ...)

2014-05-05 Thread Henrik Bengtsson
On Sat, May 3, 2014 at 10:20 PM, Clara Tang wrote: > Thanks so much for your advice. I have now upgraded the R to the latest > version and reinstall the aroma libraries. Do I need to rerun all > procedures, e.g. crmav2, or simply the mscn? No need to rerun the CRMAv2 pipeline - those results are

Re: [aroma.affymetrix] Re: Problem in MSCN : Error in smooth.spline(sKK, lambda, ...)

2014-05-02 Thread Henrik Bengtsson
Hi, it turns out that this was fixed in aroma.light v1.30.1(*). Now, aroma.light (>= 1.30.1) is part of Bioc v2.12 which is for R (>= 3.0.0). You are using R 2.15.1. So, in order for you do fix this problem, you have to upgrade R. This is something you should either way, because during the las