Thanks for your quick reply, very much appreciated. I think I have it
working
correctly in parallel now, but I'm still a bit confused and would like to
confirm if possible. Here is my main function, which is similar to the
CRMAv2
vignette except modified to be run either in single CPU mode or by
On Mon, Mar 3, 2014 at 10:46 PM, Andrew Smith wrote:
> I would also like to run segmentation in parallel, but how do you do this if
> you are using a separate reference set.
It depends what type of reference set; if it's for a tumor-normal pair
analysis nothing needs to be done, but if it's a poo
I would also like to run segmentation in parallel, but how do you do this
if you are using a separate reference set.
This is what I am running in a single process (that I would like to
parallelize):
cbs <- CbsModel(cesN, reference)
ce <- ChromosomeExplorer(cbs)
process(ce, chromosomes = 1:23, z
Hi.
On Thu, Dec 2, 2010 at 10:24 AM, Kai wrote:
> Hi Henrik,
>
> I was trying to run segmentation on a large set of ~300 SNP genotyping
> array profiles. Currently I am loading all the profiles into aroma and
> run the segmenter on them one by one, which takes a really long time.
> I was wonderin
