[Artemis-users] Intergenic region extraction

Hello, I would like to extract all the non-coding region of sequence from my bacterial sequence and write this out to a file. Is there any way of doing this in Artemis? I can select all CDS or genes and I've tried toggle selection but this then selects any features not previously selected

Re: [Artemis-users] Intergenic region extraction

Hi Mel You can use the ŒCreate Intron Features¹ option under the Create menu and then write those to file. Regards Tim On 12/12/07 09:39, Duffield Melanie L [EMAIL PROTECTED] wrote: Hello, I would like to extract all the non-coding region of sequence from my bacterial sequence and write

Re: [Artemis-users] Intergenic region extraction

Opps. I just realised that isn¹t exactly what you meant. I am not sure that there is a way of doing this in Artemis easily and you may need a script. Tim On 12/12/07 10:40, Tim Carver [EMAIL PROTECTED] wrote: Hi Mel You can use the ŒCreate Intron Features¹ option under the Create menu and

RE: [Artemis-users] Intergenic region extraction

Hi How about using something like EMBOSS - maskfeat on an entry saved in EMBL format http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/maskfeat.html best wishes Andrew From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Tim Carver