Hi Malcolm
I think the normal trick is to create a single fasta from Artemis by
File->Write->All Bases->FASTA format. This then gets them on the correct
coordinate system for your query.
The GFF multiple contig thing is a problem. It only really copes with a
single sequence. I haven't loaded GFFs
I read in the artemis manual about the "feature keys 'fasta_record' or
'contig'" (which are) "create when a multiple fasta sequence file is read in".
Indeed this works - I am able to load such a fasta file holding multiple 300
contigs generated by an assembly.
However, I find that when I load e