Hi, 

I have a gff file of a plasmid and the fasta file of the same sequence without 
the annotations.

Is it possible to copy specific features from the gff file into the fasta 
sequence?

For example, I want to save all virulence genes into one file with only those 
features. Later on I want to do the same with plasmid specific genes. 
So I have separate annotation files depending on the gene type. These will 
later be used for loading into DNAplotter so I can have several layers of 
annotations shown.
As it is now I have all features in the same layer which makes it difficult to 
present.

Really bad explanation, I hope someone understands….

Like this in figure A:


Thanks,
Astrid
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