Dear mailing list,
after succesfully installing RSPerl, i tried to use it in R. When i did
'library(RSPerl) it returned:
*Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
'/usr/local/lib/R/site-library/RSPerl/libs/RSPerl.so':
/usr/lib/perl5/auto/G
Dear mailinglist,
downloaded the source code of base with webservices. Now i wanted to build
the code and run base.
So what i did:
>ant package.bin
this returned a hugh log with eventually:
BUILD FAILED
/BASE-webservices/build.xml:1200: Could not create task or type of type:
replaceregexp.
An
Dear mailing list,
concerning my earlier problems:
can you tell me which revision of base2 the demo server is running?
This way i can try to get that revision and try to compile / run it.
thx,
Peter
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Hi,
can somebody tell whether it is possible to upload files to base2 threw
R/Perl?
I looked it up in the web services code but could not find a thing about it.
So, probably it is not. But will it ever be possible? When?
thanks,
Peter
Dear Mailinglist,
i would like to try to upload files to the Base server using POST.
After searching in the code i saw that i needed the directory_id to call the
upload script.
But i cant find where to get this directory_id from. What i do know is that
the directory_id is retrieved by an Ajax requ
Dear Mailing list,
at this moment i'm trying to install a plugin in Base but it does not work.
Say I have a plugin class called MyPlugin.class.
I have put this class in a jar MyPlugin.jar.
Then i stored the jar in my Base dir/Tomcat/nutriBase/plugins/.
class: MyPlugin
path: /../Base dir/Tomcat/
Sorry that i start a new thread, but i got the mail delivery still disabled.
When i set the class to MyWork.MyPlugin, it returns "wrong name
/base2/plugin/MyPlugin"
ty
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Still gr
There seems to be a problem with my class file.
I tried making a test class that just does:
MyPlugin p = new Plugin();
Compilation returned an error:
bad class file MyPlugin.class, file does not contain MyPlugin.class
Please remove or make sure it appears in correct subdirectory of the
classpath
I solved the problem.
It had to do with the package i was using.
thx.
Now hope the plugin works ... .
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Still grepping through log files to find problems? Stop.
Now Search log e
Dear list,
is it possible to run a script from within the plugin?
Then i have something like this in the "run" method:
public void run(...)
{
...
Runtime runtime = Runtime.getRuntime();
Process process = runtime.exec("./scirpt PluginRunner arg1 arg2");
int exitValue = process
Hi,
I think this would be a good idea.
For example: the way analyzed data (plier/rma) is stored in the database,
and presented to the users, is not very usefull (at least if you want to use
this data in another app.). It would be more useful to also present the
output as file so the user can downl
Dear list,
i'm working on a plugin that gives the possibility to run the analysis on
another machine (not the one base is installed on).
In order to download the files (cel and cdf) over http, i need the to
retrieve the URL's.
Can somebody tell me how to get this?
In the documentation i found tha
Dear list,
again i have another question for you.
I have developed a normalization plugin for Base.
But now i want this normalized data back out of base to use it in another
application. I wanted to do this using the webservices, since this is,
according to me, the only way.
Now i have 2 problems
t's url. That would be
http://someserver/Base/filemanager/files/view//home//folder1/folder2/file.txt
.
Is it the session id between view/ and /home?
thx for all your help,
Peter
2007/9/27, Nicklas Nordborg <[EMAIL PROTECTED]>:
>
> Peter Mertens wrote:
> > Dear list,
> >
oaded, but i don't have a clue how to do it correctly.
A possible solution would be to download the files to a folder in the
webserver's directory and than ... . This is not a very nice solution for
this problem so i hope somebody can help getting the url of the files on the
base serve
/nbx2.nugo.org/nutriBASE/filemanager/files/view/-42d47d6797b7b05c-/home/dominic/raw+data/H_PropylParabenC1T1-r.gpr
> on nbx2 works but of course after a sucessul user log-in.
>
>
> > Peter Mertens wrote:
> >> [...]
> >> A possible solution would be to download t
I searched in the base servlet code and the mev code, but i can't find how
they manage the download.
Could you provide more info?
thx,
Peter
2007/10/8, Nicklas Nordborg <[EMAIL PROTECTED]>:
>
> Peter Mertens wrote:
> > Hi,
> >
> > I'm willing to use
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