Re: [basedb-devel] MeV

2008-12-17 Thread Jari Häkkinen
Great, we'll upgrade MeV in base after the holidays. Jari David Waring wrote: > The MeV people have incorporated the servlet support changes in their > svn repository. So if you want to grab it from sourseforge you could > put it into the Base distribution. > > They will likely be incorpor

Re: [basedb-devel] MeV

2008-12-17 Thread David Waring
The MeV people have incorporated the servlet support changes in their svn repository. So if you want to grab it from sourseforge you could put it into the Base distribution. They will likely be incorporating auto-loading features also but those changes are more complicated and they want to a

Re: [basedb-devel] MeV

2008-12-11 Thread David Waring
I have also made another change to my version of Base. My users wanted real intensities within MeV instead of ratios. But unfortunately MeV does not support a multi experiment file with intensities. So I made a modified BioassayExporter and added a new new FileLoader in MeV based on the TDM

Re: [basedb-devel] MeV

2008-12-10 Thread Nicklas Nordborg
Thanks, this is excellent news! We were also "planning" to do this, but there has always been some other more important things that had to be done before. It is really nice that MeV has been webstart-enabled and can load files from the web. If I remember correctly the modifications we (Jari) ha

[basedb-devel] MeV

2008-12-10 Thread David Waring
As best I can tell the current version of Base has MeV support built on Version 4.0.01. The current release version of MeV 4.3.01 is much improved with a better interface and a more modules. It also has webstart support built in. I have installed MeV 4.3 on my Base installation. It required

Re: [basedb-devel] MEV can't open data files

2008-04-23 Thread Ilenia Zara
Hi Nicklas, thank you for your response. Nicklas Nordborg ha scritto: > Ilenia Zara wrote: > > [...] > Please check Tomcat's log file if you can find any error message there. > From the catalina.out file: java.sql.SQLException: Incorrect key file for table '/tmp/#sql_6a9c_0.MYI'; try to

Re: [basedb-devel] MEV can't open data files

2008-04-21 Thread Nicklas Nordborg
Ilenia Zara wrote: > Hi All, > > I read the ticket 996 (http://base.thep.lu.se/ticket/996) and I have a > similar problem. > I have an experiment with 16 raw bioassays on MG_U74Av2. > If I export a root bioassayset with more than 12 raw bioassays on MeV, > the "Slide data loading" window is stop

[basedb-devel] MEV can't open data files

2008-04-21 Thread Ilenia Zara
Hi All, I read the ticket 996 (http://base.thep.lu.se/ticket/996) and I have a similar problem. I have an experiment with 16 raw bioassays on MG_U74Av2. If I export a root bioassayset with more than 12 raw bioassays on MeV, the "Slide data loading" window is stopping at 0% with the error messag