[base] wrongly aligned spot images

2006-05-30 Thread Bob MacCallum
Hi, Has anyone had trouble creating the jpeg spot images from GenePix files? All the software works without complaining, but the spots all seem to be in the wrong place: not centred and they don't seem to correspond to the raw data. I've only tried this one file and I'm guessing that the problem

Re: [base] BASE 2.0 RC2 released

2006-05-30 Thread Jari Häkkinen
Hi, We missed out on Affy support but it will appear very soon. Sorry about the slight delay. There is a requirement spec that I'll post later today. Affymetrix in BASE1 has been done but I am not able to give any details about this. The migration from BASE 1 to 2 assumes a pristine 1.2.late v

Re: [base] BASE 2.0 RC2 released

2006-05-30 Thread Steve Taylor
Hi, > > I am happy to announce that BASE 2.0 RC 2 is now available for download: > http://lev.thep.lu.se/trac/base/wiki/DownloadPage > > Installation instructions are available at the BASE2 home page: > http://lev.thep.lu.se/trac/base/wiki It's good to see BASE2 is progressing! I notice Affy sup