Re: [base] high-throughput transcriptome sequencing data

2008-10-21 Thread Bob MacCallum
Hi Jari, Thanks for updating me/the list on this. Jari Häkkinen writes: > Hi Bob, > > Sorry for not commenting your thoughs on storing sequencing data in > BASE. We have discussed it here and will be looking into it later. This > will become an issue for us also since we have sequencing

Re: [base] high-throughput transcriptome sequencing data

2008-10-21 Thread Jari Häkkinen
Hi Bob, Sorry for not commenting your thoughs on storing sequencing data in BASE. We have discussed it here and will be looking into it later. This will become an issue for us also since we have sequencing equipment generating huge quantities of data. So far we are only getting friendly with t

[base] high-throughput transcriptome sequencing data

2008-10-21 Thread Bob MacCallum
Hi again. Any thoughts on this (see below) at all? Please reply off-list if you are feeling shy. I'd also like to raise some general questions about scalability. 1. Is anyone working on an Affymetrix SNP plugin? 2. Is anyone doing anything with tiling arrays? I realise that archiving the .CE